{
    "type": "genome",
    "identifier": "GCA_026388095.1",
    "organism": "Elusimicrobiota bacterium",
    "title": "Elusimicrobiota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Jill Banfield's Lab at Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026388095.1",
        "bioproject": "PRJNA852163",
        "biosample": "SAMN30026242",
        "wgs_master": "JAPLKL000000000.1",
        "refseq_category": "na",
        "taxid": "2030800",
        "species_taxid": "2030800",
        "organism_name": "Elusimicrobiota bacterium",
        "infraspecific_name": "",
        "isolate": "LacPavin_0419_WC70L_MAG_67_18",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/24",
        "asm_name": "ASM2638809v1",
        "submitter": "Jill Banfield's Lab at Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/388/095/GCA_026388095.1_ASM2638809v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-24",
    "dateModified": "2022-11-24",
    "datePublished": "2022-11-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Elusimicrobiota bacterium"
        ],
        "sample_taxid": [
            "2030800"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France: Besse-et-Saint-Anastaise, Lac Pavin"
        ],
        "sample_host_location_id": [],
        "data_size": "1.273 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4598927",
        "Number of Sequences": "79",
        "Longest Sequences (bp)": "215647",
        "N50 (bp)": "103109",
        "Gap Ratio (%)": "0.004197",
        "GCcontent (%)": "66.8",
        "Number of CDSs": "4082",
        "Average Protein Length": "345.8",
        "Coding Ratio (%)": "92.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Inmirania thermothiophila",
                "strain": "strain=DSM 100275",
                "accession": "GCA_003751635.1",
                "taxid": 1750597,
                "species_taxid": 1750597,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2504,
                "matched_fragments": 91,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microvirga lotononidis",
                "strain": "strain=WSM3557",
                "accession": "GCA_000262405.1",
                "taxid": 864069,
                "species_taxid": 864069,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2286,
                "matched_fragments": 51,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thioalbus denitrificans",
                "strain": "strain=DSM 26407",
                "accession": "GCA_003337735.1",
                "taxid": 547122,
                "species_taxid": 547122,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2205,
                "matched_fragments": 73,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brachybacterium aquaticum",
                "strain": "strain=DSM 28796",
                "accession": "GCA_014204755.1",
                "taxid": 1432564,
                "species_taxid": 1432564,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1414,
                "matched_fragments": 64,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brachybacterium nesterenkovii",
                "strain": "strain=CIP104813",
                "accession": "GCA_900163655.1",
                "taxid": 47847,
                "species_taxid": 47847,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1058,
                "matched_fragments": 54,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomyces radicidentis",
                "strain": "strain=CCUG 36733",
                "accession": "GCA_001553565.1",
                "taxid": 111015,
                "species_taxid": 111015,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0001,
                "matched_fragments": 69,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Carbonactinospora thermoautotrophica",
                "strain": "strain=UBT1",
                "accession": "GCA_001543895.1",
                "taxid": 1469144,
                "species_taxid": 1469144,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9851,
                "matched_fragments": 72,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptomyces qinglanensis",
                "strain": "strain=172205",
                "accession": "GCA_003265665.1",
                "taxid": 943816,
                "species_taxid": 943816,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9602,
                "matched_fragments": 107,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microvirga ossetica",
                "strain": "strain=V5/3M",
                "accession": "GCA_002741015.1",
                "taxid": 1882682,
                "species_taxid": 1882682,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.932,
                "matched_fragments": 65,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptomyces qinglanensis",
                "strain": "strain=CGMCC 4.6825",
                "accession": "GCA_900111245.1",
                "taxid": 943816,
                "species_taxid": 943816,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8906,
                "matched_fragments": 106,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blastococcus litoris",
                "strain": "strain=GP-S2-8",
                "accession": "GCA_003075095.1",
                "taxid": 2171622,
                "species_taxid": 2171622,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8794,
                "matched_fragments": 73,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halorhodospira neutriphila",
                "strain": "strain=DSM 15116",
                "accession": "GCA_016584055.1",
                "taxid": 168379,
                "species_taxid": 168379,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8638,
                "matched_fragments": 69,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomycetospora cinnamomea",
                "strain": "strain=DSM 45771",
                "accession": "GCA_003096675.1",
                "taxid": 663609,
                "species_taxid": 663609,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8625,
                "matched_fragments": 106,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paracoccus binzhouensis",
                "strain": "strain=wg1",
                "accession": "GCA_016446475.1",
                "taxid": 2796149,
                "species_taxid": 2796149,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8357,
                "matched_fragments": 68,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Georgenia thermotolerans",
                "strain": "strain=DSM 21501",
                "accession": "GCA_009299305.1",
                "taxid": 527326,
                "species_taxid": 527326,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8337,
                "matched_fragments": 107,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas delhiensis",
                "strain": "strain=CCM 7361",
                "accession": "GCA_900099945.1",
                "taxid": 366289,
                "species_taxid": 366289,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8306,
                "matched_fragments": 130,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Georgenia thermotolerans",
                "strain": "strain=NBRC 104148",
                "accession": "GCA_009193185.1",
                "taxid": 527326,
                "species_taxid": 527326,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8254,
                "matched_fragments": 118,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cereibacter changlensis",
                "strain": "strain=DSM 18774",
                "accession": "GCA_003254335.1",
                "taxid": 402884,
                "species_taxid": 402884,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.778,
                "matched_fragments": 51,
                "total_fragments": 1494,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903830945.1",
                "gtdb_species": "s__UBA9628 sp903830945",
                "ani": 83.7763,
                "matched_fragments": 690,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__UBA9628",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.78",
                "min_intra_species_ani": "99.78",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016212825.1",
                "gtdb_species": "s__UBA9628 sp016212825",
                "ani": 83.509,
                "matched_fragments": 725,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__UBA9628",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903881545.1",
                "gtdb_species": "s__UBA9628 sp903881545",
                "ani": 80.0118,
                "matched_fragments": 412,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__UBA9628",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003452935.1",
                "gtdb_species": "s__UBA9628 sp003452935",
                "ani": 78.7976,
                "matched_fragments": 366,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__UBA9628",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.94",
                "min_intra_species_ani": "99.94",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016212885.1",
                "gtdb_species": "s__UBA9639 sp016212885",
                "ani": 77.9968,
                "matched_fragments": 235,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA1565;g__UBA9639",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016218545.1",
                "gtdb_species": "s__JACQWX01 sp016218545",
                "ani": 77.7904,
                "matched_fragments": 324,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__JACQWX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016212795.1",
                "gtdb_species": "s__JACRDT01 sp016212795",
                "ani": 77.7539,
                "matched_fragments": 315,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__JACRDT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016234805.1",
                "gtdb_species": "s__JACQWX01 sp016234805",
                "ani": 77.7238,
                "matched_fragments": 266,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__JACQWX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001799695.1",
                "gtdb_species": "s__UBA10166 sp001799695",
                "ani": 77.1701,
                "matched_fragments": 248,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA1565;g__UBA10166",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.69",
                "min_intra_species_ani": "99.69",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016218575.1",
                "gtdb_species": "s__JACRDN01 sp016218575",
                "ani": 76.8978,
                "matched_fragments": 165,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__JACRDN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016182905.1",
                "gtdb_species": "s__GWA2-66-18 sp016182905",
                "ani": 76.7766,
                "matched_fragments": 246,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__GWA2-66-18",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016194625.1",
                "gtdb_species": "s__GWA2-66-18 sp016194625",
                "ani": 76.2696,
                "matched_fragments": 169,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__GWA2-66-18",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016212845.1",
                "gtdb_species": "s__JACRDR01 sp016212845",
                "ani": 76.1433,
                "matched_fragments": 101,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__JACRDR01;g__JACRDR01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016196755.1",
                "gtdb_species": "s__SCTT01 sp016196755",
                "ani": 76.1028,
                "matched_fragments": 247,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA1565;g__SCTT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016218495.1",
                "gtdb_species": "s__SCTT01 sp016218495",
                "ani": 76.0107,
                "matched_fragments": 211,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA1565;g__SCTT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016866775.1",
                "gtdb_species": "s__VGLJ01 sp016866775",
                "ani": 74.8204,
                "matched_fragments": 69,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__VGLJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000518925.1",
                "gtdb_species": "s__Paracoccus sp000518925",
                "ani": 74.7364,
                "matched_fragments": 72,
                "total_fragments": 1494,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.13",
                "min_intra_species_ani": "98.71",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Elusimicrobiota",
        "c__Elusimicrobia",
        "o__UBA1565",
        "f__UBA9628",
        "g__UBA9628",
        "s__UBA9628 sp026388095"
    ],
    "_genome_taxon": [
        "Elusimicrobiota",
        "bacterium",
        "d__Bacteria",
        "p__Elusimicrobiota",
        "c__Elusimicrobia",
        "o__UBA1565",
        "f__UBA9628",
        "g__UBA9628",
        "s__UBA9628 sp026388095",
        "Bacteria",
        "Elusimicrobiota",
        "Elusimicrobia",
        "UBA1565",
        "UBA9628",
        "UBA9628",
        "UBA9628",
        "sp026388095"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}