{
    "type": "genome",
    "identifier": "GCA_026394765.1",
    "organism": "Methanomicrobiales archaeon",
    "title": "Methanomicrobiales archaeon",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Jill Banfield's Lab at Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026394765.1",
        "bioproject": "PRJNA852163",
        "biosample": "SAMN30025909",
        "wgs_master": "JAPKXQ000000000.1",
        "refseq_category": "na",
        "taxid": "2184052",
        "species_taxid": "2184052",
        "organism_name": "Methanomicrobiales archaeon",
        "infraspecific_name": "",
        "isolate": "LacPavin_0920_SED3_MAG_54_13",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/24",
        "asm_name": "ASM2639476v1",
        "submitter": "Jill Banfield's Lab at Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/394/765/GCA_026394765.1_ASM2639476v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-24",
    "dateModified": "2022-11-24",
    "datePublished": "2022-11-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Methanomicrobiales archaeon"
        ],
        "sample_taxid": [
            "2184052"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France: Besse-et-Saint-Anastaise, Lac Pavin"
        ],
        "sample_host_location_id": [],
        "data_size": "0.528 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 83.33,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1833841",
        "Number of Sequences": "107",
        "Longest Sequences (bp)": "59676",
        "N50 (bp)": "26851",
        "Gap Ratio (%)": "0.000164",
        "GCcontent (%)": "54.4",
        "Number of CDSs": "1738",
        "Average Protein Length": "280.9",
        "Coding Ratio (%)": "79.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 83.33,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": []
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.086,
        "cell_length": 0.11,
        "doubling_h": 1.123,
        "growth_tmp": 35.61,
        "optimum_tmp": 35.621,
        "optimum_ph": 6.957,
        "genome_size": 2358795.323,
        "gc_content": 53.366,
        "coding_genes": 2554.773,
        "rRNA16S_genes": 2.142,
        "tRNA_genes": 49.618,
        "gram_stain": 0.027,
        "sporulation": 0.0,
        "motility": 0.285,
        "range_salinity": 0.5,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 0.857,
        "thermophilic_range_tmp": 0.142,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.117,
        "coccus_cell_shape": 0.823,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.029,
        "spiral_cell_shape": 0.029
    },
    "_gtdb_taxon": [
        "d__Archaea",
        "p__Halobacteriota",
        "c__Methanomicrobia",
        "o__Methanomicrobiales",
        "f__Methanospirillaceae",
        "g__JAPKXQ01",
        "s__JAPKXQ01 sp026394765"
    ],
    "_genome_taxon": [
        "Methanomicrobiales",
        "archaeon",
        "d__Archaea",
        "p__Halobacteriota",
        "c__Methanomicrobia",
        "o__Methanomicrobiales",
        "f__Methanospirillaceae",
        "g__JAPKXQ01",
        "s__JAPKXQ01 sp026394765",
        "Archaea",
        "Halobacteriota",
        "Methanomicrobia",
        "Methanomicrobiales",
        "Methanospirillaceae",
        "JAPKXQ01",
        "JAPKXQ01",
        "sp026394765"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}