# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_12	LOCUS_00120	sequence1:5961..6185(+)	internal_stop_codon	5787..5789(+),6369..6371(+),6345..6347(+),6183..6185(+),6288..6290(+),5958..5960(+),5769..5771(+)		WP_196768340.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	100.0	10.3	56.0
MGA_17	LOCUS_00170	sequence1:10982..11521(-)	internal_stop_codon	11711..11713(-),10982..10984(-)		WP_005897713.1	ribonucleotide-diphosphate reductase subunit beta	100.0	52.0	54.2
MGA_18	LOCUS_00180	sequence1:12079..12273(-)	internal_stop_codon	12277..12279(-)		WP_003243686.1	alkyl hydroperoxide reductase subunit C	89.1	30.5	47.4
MGA_19	LOCUS_00190	sequence1:12277..12684(-)	internal_stop_codon	12277..12279(-)		WP_010880277.1	peroxiredoxin	95.6	62.1	45.0
MGA_20	LOCUS_00200	sequence1:12950..13342(-)	internal_stop_codon	12830..12832(-),12950..12952(-)		WP_011962679.1	NAD(P)H-dependent oxidoreductase	97.7	60.0	44.9
MGA_21	LOCUS_00210	sequence1:13427..13750(-)	internal_stop_codon	13823..13825(-),13955..13957(-),13916..13918(-),13853..13855(-),13751..13753(-)		WP_000633984.1	ribonucleoside-diphosphate reductase subunit alpha	93.5	12.7	34.0
MGA_22	LOCUS_00220	sequence1:14096..14263(-)	internal_stop_codon	13955..13957(-),14384..14386(-),14096..14098(-)		WP_002865087.1	ribonucleoside-diphosphate reductase subunit alpha	100.0	7.0	52.7
MGA_23	LOCUS_00230	sequence1:14930..15556(-)	internal_stop_codon	14783..14785(-),14930..14932(-),14795..14797(-),14888..14890(-)		WP_010880000.1	ribonucleoside-diphosphate reductase subunit alpha	99.0	26.6	40.4
MGA_24	LOCUS_00240	sequence1:15668..16033(-)	partial			WP_010868726.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	75.2	4.1	35.2
MGA_26	LOCUS_00260	sequence1:18650..19267(-)	internal_stop_codon	18470..18472(-),18650..18652(-)		WP_012583825.1	site-specific tyrosine recombinase XerD	80.5	55.4	33.9
MGA_46	LOCUS_00460	sequence1:32447..33289(-)	internal_stop_codon	33374..33376(-)		WP_004080622.1	RluA family pseudouridine synthase	87.1	72.0	37.4
MGA_76	LOCUS_00760	sequence1:54844..55533(-)	partial			WP_011015981.1	valine--tRNA ligase	66.8	18.3	31.8
MGA_88	LOCUS_00880	sequence1:62149..62511(-)	internal_stop_codon	62521..62523(-),62149..62151(-),62107..62109(-),62683..62685(-)		WP_010938822.1	MBL fold metallo-hydrolase	100.0	23.1	44.4
MGA_89	LOCUS_00890	sequence1:62683..62892(-)	internal_stop_codon	63136..63138(-),63010..63012(-),62521..62523(-),63001..63003(-),62683..62685(-)		WP_010938822.1	MBL fold metallo-hydrolase	89.9	11.6	43.5
MGA_90	LOCUS_00900	sequence1:65001..65255(-)	internal_stop_codon	64872..64874(-),65259..65261(-),65001..65003(-),65358..65360(-)		WP_164931071.1	endolytic transglycosylase MltG	97.6	24.5	41.9
MGA_105	LOCUS_01050	sequence1:73575..73868(-)	internal_stop_codon	73872..73874(-)		WP_011023074.1	peptidylprolyl isomerase	100.0	59.4	45.4
MGA_112	LOCUS_01120	sequence1:79763..79969(+)	internal_stop_codon	79967..79969(+)		WP_005088872.1	GuaB1 family IMP dehydrogenase-related protein	100.0	14.2	47.1
MGA_113	LOCUS_01130	sequence1:79970..80245(+)	internal_stop_codon	80429..80431(+),80243..80245(+),79967..79969(+),80294..80296(+),80339..80341(+),80252..80254(+)		WP_011015302.1	GuaB1 family IMP dehydrogenase-related protein	100.0	18.9	37.4
MGA_122	LOCUS_01220	sequence1:83924..84379(-)	internal_stop_codon	84638..84640(-),84482..84484(-),84449..84451(-),84599..84601(-),84560..84562(-)		WP_003434933.1	UPF0489 family protein	94.7	59.3	34.9
MGA_125	LOCUS_01250	sequence1:84967..85590(-)	partial			WP_012545713.1	DNA polymerase III subunit delta'	88.4	53.0	27.7
MGA_127	LOCUS_01270	sequence1:86523..86849(-)	internal_stop_codon	86523..86525(-),86940..86942(-),86859..86861(-),86880..86882(-)		WP_010933055.1	lysine--tRNA ligase	98.1	20.7	43.4
MGA_129	LOCUS_01290	sequence1:87333..87551(-)	internal_stop_codon	87333..87335(-),87567..87569(-),87171..87173(-),87666..87668(-),87690..87692(-)		WP_003701392.1	lysine--tRNA ligase	100.0	14.5	47.2
MGA_144	LOCUS_01440	sequence1:94968..95474(+)	internal_stop_codon	94890..94892(+),95619..95621(+),95472..95474(+)		WP_003420483.1	chromosomal replication initiator protein DnaA	100.0	38.3	51.8
MGA_152	LOCUS_01520	sequence1:102032..102334(+)	partial			WP_001982425.1	alanine racemase	76.0	20.6	35.9
MGA_155	LOCUS_01550	sequence1:104577..105176(+)	partial			WP_057504658.1	ZIP family metal transporter	87.4	68.2	33.7
MGA_162	LOCUS_01620	sequence1:109774..109989(-)	internal_stop_codon	109774..109776(-)		WP_004194248.1	heat-inducible transcriptional repressor HrcA	91.5	19.1	41.5
MGA_164	LOCUS_01640	sequence1:110671..111021(-)	internal_stop_codon	111079..111081(-)		WP_000522871.1	ABC transporter ATP-binding protein	85.3	44.4	44.0
MGA_165	LOCUS_01650	sequence1:111079..111336(-)	internal_stop_codon	111079..111081(-)		WP_000571422.1	ABC transporter ATP-binding protein	87.1	33.8	41.9
MGA_166	LOCUS_01660	sequence1:112094..112288(+)	internal_stop_codon	112286..112288(+),112004..112006(+),111944..111946(+)		WP_004191909.1	phenylalanine--tRNA ligase subunit alpha	100.0	18.7	50.0
MGA_167	LOCUS_01670	sequence1:112331..112669(+)	internal_stop_codon	112286..112288(+)		WP_001053743.1	phenylalanine--tRNA ligase subunit alpha	95.5	31.7	54.6
MGA_174	LOCUS_01740	sequence1:117383..117685(+)	internal_stop_codon	117824..117826(+),117683..117685(+)		WP_012545153.1	TatD family nuclease-associated radical SAM protein	68.0	14.7	42.6
MGA_177	LOCUS_01770	sequence1:118791..119279(-)	internal_stop_codon	119307..119309(-),118791..118793(-),118668..118670(-)		WP_151756788.1	type IV secretion system DNA-binding domain-containing protein	92.0	16.4	30.9
MGA_196	LOCUS_01960	sequence1:132273..133070(+)	partial			WP_000821727.1	magnesium/cobalt transporter CorA	95.1	73.2	22.1
MGA_202	LOCUS_02020	sequence1:136189..136413(-)	internal_stop_codon	136549..136551(-),135967..135969(-),136045..136047(-),136438..136440(-),136015..136017(-),136189..136191(-)		WP_004525454.1	pirin family protein	100.0	30.7	51.4
MGA_205	LOCUS_02050	sequence1:139078..139899(-)	internal_stop_codon	139078..139080(-),139015..139017(-)		WP_151756788.1	type IV secretion system DNA-binding domain-containing protein	97.1	27.8	26.3
MGA_218	LOCUS_02180	sequence1:149128..149445(-)	internal_stop_codon	149482..149484(-),149554..149556(-),148900..148902(-),149128..149130(-),149020..149022(-)		WP_001003185.1	heavy metal translocating P-type ATPase	97.1	12.8	57.3
MGA_219	LOCUS_02190	sequence1:149554..149733(-)	internal_stop_codon	149482..149484(-),149554..149556(-),149974..149976(-),149776..149778(-),149749..149751(-),149995..149997(-)		WP_011861457.1	heavy metal translocating P-type ATPase	94.9	6.7	64.3
MGA_220	LOCUS_02200	sequence1:150442..150768(-)	internal_stop_codon	150343..150345(-),150442..150444(-),150235..150237(-),150175..150177(-)		WP_063921601.1	heavy metal translocating P-type ATPase	80.6	10.4	33.3
MGA_221	LOCUS_02210	sequence1:150823..151008(-)	internal_stop_codon	150823..150825(-)		WP_012775225.1	heavy metal translocating P-type ATPase	96.7	7.1	47.5
MGA_229	LOCUS_02290	sequence1:158083..158559(-)	frameshift		158710	WP_002679327.1	methionyl-tRNA formyltransferase	95.6	50.3	29.9
MGA_235	LOCUS_02350	sequence1:163146..163484(+)	internal_stop_codon	163482..163484(+),163713..163715(+),163575..163577(+),163635..163637(+)		WP_012256432.1	preprotein translocase subunit SecA	68.8	7.7	48.1
MGA_236	LOCUS_02360	sequence1:163845..164042(+)	internal_stop_codon	163713..163715(+),164148..164150(+),163575..163577(+),164166..164168(+),164040..164042(+),163635..163637(+)		WP_012545108.1	preprotein translocase subunit SecA	78.5	5.8	62.7
MGA_237	LOCUS_02370	sequence1:164325..164987(+)	internal_stop_codon	164148..164150(+),165240..165242(+),164166..164168(+)		WP_010966131.1	preprotein translocase subunit SecA	80.9	21.2	60.7
MGA_238	LOCUS_02380	sequence1:165048..165242(+)	internal_stop_codon	165240..165242(+),165318..165320(+)		WP_005080888.1	preprotein translocase subunit SecA	78.1	5.4	62.0
MGA_239	LOCUS_02390	sequence1:165330..165908(+)	internal_stop_codon	165240..165242(+),165318..165320(+)		WP_010883478.1	preprotein translocase subunit SecA	95.3	19.3	28.4
MGA_242	LOCUS_02420	sequence1:168338..169426(-)	internal_stop_codon	169487..169489(-)		WP_151756788.1	type IV secretion system DNA-binding domain-containing protein	93.9	34.3	27.8
MGA_247	LOCUS_02470	sequence1:173078..173380(+)	internal_stop_codon	173450..173452(+),173564..173566(+),173378..173380(+),173381..173383(+),173492..173494(+),173561..173563(+),173504..173506(+)		WP_005772005.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	95.0	21.1	32.4
MGA_248	LOCUS_02480	sequence1:173606..173851(+)	internal_stop_codon	173450..173452(+),173564..173566(+),174098..174100(+),173561..173563(+),173915..173917(+),173504..173506(+),173492..173494(+),173378..173380(+),173381..173383(+),173849..173851(+)		WP_002225150.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	97.5	15.8	50.0
MGA_252	LOCUS_02520	sequence1:176199..176723(-)	internal_stop_codon	176199..176201(-),176160..176162(-),176145..176147(-)		WP_000686845.1	AAA family ATPase	51.7	4.9	42.2
MGA_261	LOCUS_02610	sequence1:181441..181914(-)	internal_stop_codon	182203..182205(-),182107..182109(-),182143..182145(-),181369..181371(-),181981..181983(-),182038..182040(-),181441..181443(-),182158..182160(-)		WP_000664449.1	Holliday junction branch migration DNA helicase RuvB	100.0	47.6	31.1
MGA_267	LOCUS_02670	sequence1:184840..185106(+)	internal_stop_codon	185104..185106(+),184792..184794(+)		WP_002657947.1	nucleoside-diphosphate kinase	96.6	49.7	40.0
MGA_271	LOCUS_02710	sequence1:188707..188955(+)	internal_stop_codon	188992..188994(+),189013..189015(+),188953..188955(+),188977..188979(+),189139..189141(+),189121..189123(+),189106..189108(+)		WP_048147291.1	YbhB/YbcL family Raf kinase inhibitor-like protein	74.4	34.3	50.8
MGA_272	LOCUS_02720	sequence1:189979..190281(-)	partial			WP_010880875.1	UDP-N-acetylmuramate--L-alanine ligase	68.0	15.0	41.2
MGA_274	LOCUS_02740	sequence1:192726..192890(+)	internal_stop_codon	193107..193109(+),193104..193106(+),192984..192986(+),192888..192890(+),193092..193094(+),193050..193052(+),192543..192545(+),192435..192437(+),192687..192689(+)		WP_138432165.1	sodium-translocating pyrophosphatase	100.0	7.4	55.6
MGA_277	LOCUS_02770	sequence1:197329..197547(+)	internal_stop_codon	197317..197319(+)		WP_012256759.1	single-stranded DNA-binding protein	66.7	27.3	52.1
MGA_294	LOCUS_02940	sequence1:213225..213584(-)	partial			WP_013098633.1	small-conductance mechanosensitive channel MscS	89.1	36.3	28.3
MGA_301	LOCUS_03010	sequence1:217376..217579(+)	internal_stop_codon	217256..217258(+),217577..217579(+),217166..217168(+),217775..217777(+),217259..217261(+),217358..217360(+)		WP_012869581.1	pyruvate kinase	97.0	11.2	58.5
MGA_304	LOCUS_03040	sequence1:218816..218977(-)	internal_stop_codon	218990..218992(-),218699..218701(-),218816..218818(-)		WP_011405370.1	thioredoxin-disulfide reductase	100.0	14.2	54.7
MGA_305	LOCUS_03050	sequence1:218990..219262(-)	internal_stop_codon	218990..218992(-),219281..219283(-),218816..218818(-)		WP_000940581.1	thioredoxin-disulfide reductase	95.6	27.2	66.3
MGA_306	LOCUS_03060	sequence1:219281..219457(-)	internal_stop_codon	218990..218992(-),219281..219283(-)		WP_000940581.1	thioredoxin-disulfide reductase	94.8	17.4	87.3
MGA_323	LOCUS_03230	sequence1:228919..229185(-)	internal_stop_codon	228874..228876(-),228706..228708(-),229273..229275(-),229225..229227(-),228919..228921(-),229471..229473(-)		WP_002858719.1	tryptophan--tRNA ligase	100.0	27.0	61.4
MGA_335	LOCUS_03350	sequence1:237922..238275(-)	partial			WP_000478084.1	peptidoglycan DD-metalloendopeptidase Csd3	60.7	23.1	40.3
MGA_339	LOCUS_03390	sequence1:240569..241051(-)	partial			WP_010868098.1	HIT family protein	61.9	66.0	30.3
MGA_347	LOCUS_03470	sequence1:245471..245707(+)	internal_stop_codon	245705..245707(+)		WP_000405892.1	translational GTPase TypA	100.0	12.9	65.4
MGA_348	LOCUS_03480	sequence1:245732..246163(+)	internal_stop_codon	246350..246352(+),245705..245707(+),246161..246163(+)		WP_003688609.1	translational GTPase TypA	98.6	22.6	57.0
MGA_349	LOCUS_03490	sequence1:246590..246745(+)	internal_stop_codon	246350..246352(+),246557..246559(+),246527..246529(+),246743..246745(+)		WP_011108480.1	translational GTPase TypA	100.0	8.5	60.8
MGA_350	LOCUS_03500	sequence1:246749..247117(+)	frameshift,internal_stop_codon	246743..246745(+),247115..247117(+),246557..246559(+),246527..246529(+)	247261	WP_002859745.1	translational GTPase TypA	95.9	19.4	50.4
MGA_351	LOCUS_03510	sequence1:247130..247282(+)	internal_stop_codon	247115..247117(+)		WP_010918627.1	translational GTPase TypA	90.0	7.4	60.0
MGA_354	LOCUS_03540	sequence1:248161..248823(-)	internal_stop_codon	248833..248835(-),249043..249045(-)		WP_005793720.1	proline--tRNA ligase	100.0	42.7	42.7
MGA_355	LOCUS_03550	sequence1:248833..248982(-)	internal_stop_codon	248833..248835(-),249268..249270(-),249043..249045(-)		WP_005793720.1	proline--tRNA ligase	100.0	9.9	79.6
MGA_356	LOCUS_03560	sequence1:249043..249189(-)	internal_stop_codon	248833..248835(-),249355..249357(-),249268..249270(-),249418..249420(-),249043..249045(-)		WP_011963521.1	proline--tRNA ligase	100.0	9.6	56.2
MGA_357	LOCUS_03570	sequence1:249418..249567(-)	internal_stop_codon	249355..249357(-),249268..249270(-),249571..249573(-),249418..249420(-)		WP_005793720.1	proline--tRNA ligase	100.0	9.9	71.4
MGA_362	LOCUS_03620	sequence1:251229..251486(-)	internal_stop_codon	251544..251546(-),251154..251156(-),251490..251492(-),251229..251231(-)		WP_010724987.1	isoleucine--tRNA ligase	100.0	8.3	47.7
MGA_364	LOCUS_03640	sequence1:252552..253316(-)	internal_stop_codon	252552..252554(-),252465..252467(-)		WP_010882759.1	isoleucine--tRNA ligase	85.0	19.7	39.8
MGA_366	LOCUS_03660	sequence1:254109..254336(-)	internal_stop_codon	254109..254111(-),253836..253838(-)		WP_011014916.1	isoleucine--tRNA ligase	92.0	6.5	47.8
MGA_367	LOCUS_03670	sequence1:255514..255750(+)	internal_stop_codon	255508..255510(+),255382..255384(+),255427..255429(+),255250..255252(+),255487..255489(+),255511..255513(+)		WP_004082978.1	acetate kinase	96.2	18.9	42.1
MGA_371	LOCUS_03710	sequence1:259277..259672(-)	internal_stop_codon	259694..259696(-),259682..259684(-)		WP_002898317.1	histidine phosphatase family protein	97.7	59.1	34.1
MGA_375	LOCUS_03750	sequence1:261891..262364(-)	internal_stop_codon	261891..261893(-),262368..262370(-),262527..262529(-),262545..262547(-)		WP_002263477.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	97.5	31.9	37.9
MGA_376	LOCUS_03760	sequence1:262626..262937(-)	internal_stop_codon	262368..262370(-),262527..262529(-),262626..262628(-),262545..262547(-)		WP_004079967.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	96.1	20.1	55.6
MGA_378	LOCUS_03780	sequence1:263648..263830(-)	internal_stop_codon	264011..264013(-),263648..263650(-),263849..263851(-),263837..263839(-),264050..264052(-),264044..264046(-),264113..264115(-)		WP_011763417.1	NADP-dependent malic enzyme	100.0	13.8	73.3
MGA_381	LOCUS_03810	sequence1:264859..265686(-)	internal_stop_codon	265714..265716(-)		WP_011962858.1	D-alanine--D-alanine ligase	96.0	77.0	41.1
MGA_395	LOCUS_03950	sequence1:275953..276588(-)	internal_stop_codon	275953..275955(-)		WP_011337826.1	ABC-F family ATP-binding cassette domain-containing protein	96.2	36.4	33.2
MGA_399	LOCUS_03990	sequence1:277545..277985(+)	internal_stop_codon	277494..277496(+)		WP_008765852.1	ribosome biogenesis GTP-binding protein YihA/YsxC	97.3	70.3	43.7
MGA_400	LOCUS_04000	sequence1:278113..278373(+)	internal_stop_codon	278371..278373(+),278098..278100(+),278386..278388(+)		WP_011836721.1	ABC-F family ATP-binding cassette domain-containing protein	77.9	10.8	41.2
MGA_401	LOCUS_04010	sequence1:278422..278865(+)	internal_stop_codon	278371..278373(+),278905..278907(+),279037..279039(+),278863..278865(+),278386..278388(+),278866..278868(+)		WP_011962749.1	ABC-F family ATP-binding cassette domain-containing protein	85.7	20.3	54.0
MGA_402	LOCUS_04020	sequence1:279043..279438(+)	internal_stop_codon	279436..279438(+),279490..279492(+),278905..278907(+),279037..279039(+),279697..279699(+)		WP_005795166.1	ABC-F family ATP-binding cassette domain-containing protein	99.2	23.3	49.0
MGA_404	LOCUS_04040	sequence1:280643..280981(-)	internal_stop_codon	280610..280612(-),281111..281113(-),281024..281026(-),280643..280645(-)		WP_011016335.1	F0F1 ATP synthase subunit beta	99.1	24.0	76.6
MGA_405	LOCUS_04050	sequence1:281111..281365(-)	internal_stop_codon	281111..281113(-),281636..281638(-),281024..281026(-),281390..281392(-)		WP_003699945.1	F0F1 ATP synthase subunit beta	97.6	17.5	85.4
MGA_406	LOCUS_04060	sequence1:281390..281632(-)	internal_stop_codon	281696..281698(-),281111..281113(-),281636..281638(-),281672..281674(-),281390..281392(-)		WP_001032431.1	F0F1 ATP synthase subunit beta	100.0	17.1	62.5
MGA_407	LOCUS_04070	sequence1:282041..282568(-)	internal_stop_codon	282041..282043(-),282596..282598(-)		WP_011105591.1	F0F1 ATP synthase subunit gamma	90.9	51.0	32.5
MGA_410	LOCUS_04100	sequence1:283446..283784(-)	internal_stop_codon	284031..284033(-),283818..283820(-),284028..284030(-),283902..283904(-)		WP_000080506.1	F0F1 ATP synthase subunit alpha	96.4	22.1	40.5
MGA_411	LOCUS_04110	sequence1:284031..284210(-)	internal_stop_codon	284220..284222(-),284451..284453(-),283902..283904(-),284310..284312(-),284031..284033(-),284028..284030(-),283818..283820(-)		WP_011183010.1	F0F1 ATP synthase subunit alpha	100.0	11.2	84.7
MGA_426	LOCUS_04260	sequence2:3098..3574(-)	internal_stop_codon	3587..3589(-)		WP_001832554.1	polyribonucleotide nucleotidyltransferase	96.8	21.7	45.8
MGA_427	LOCUS_04270	sequence2:3587..3874(-)	internal_stop_codon	3884..3886(-),3587..3589(-)		WP_001832554.1	polyribonucleotide nucleotidyltransferase	95.8	12.1	61.5
MGA_428	LOCUS_04280	sequence2:3884..4171(-)	internal_stop_codon	3884..3886(-),4178..4180(-),4307..4309(-),4235..4237(-)		WP_071541509.1	polyribonucleotide nucleotidyltransferase	98.9	12.4	64.9
MGA_430	LOCUS_04300	sequence2:4658..4891(-)	internal_stop_codon	4658..4660(-),4892..4894(-)		WP_011143141.1	polyribonucleotide nucleotidyltransferase	98.7	10.7	44.7
MGA_431	LOCUS_04310	sequence2:4892..5230(-)	internal_stop_codon	4658..4660(-),4892..4894(-)		WP_011964146.1	polyribonucleotide nucleotidyltransferase	83.9	13.1	44.7
MGA_436	LOCUS_04360	sequence2:7886..8119(-)	internal_stop_codon	7868..7870(-),8174..8176(-),7886..7888(-)		WP_009993651.1	GTPase ObgE	98.7	13.7	50.0
MGA_444	LOCUS_04440	sequence2:14359..14886(+)	internal_stop_codon	14884..14886(+),15148..15150(+),14347..14349(+)		WP_002682344.1	HD domain-containing protein	81.7	28.8	29.7
MGA_447	LOCUS_04470	sequence2:16985..17164(-)	internal_stop_codon	16883..16885(-),17261..17263(-),16985..16987(-)		WP_010942643.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	100.0	19.0	44.1
MGA_452	LOCUS_04520	sequence2:20567..20698(+)	internal_stop_codon	20342..20344(+),20513..20515(+)		WP_003098129.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	88.4	17.8	52.6
MGA_501	LOCUS_05010	sequence2:50215..50397(-)	internal_stop_codon	50098..50100(-),50500..50502(-),50215..50217(-),50656..50658(-)		WP_037399209.1	ABC transporter ATP-binding protein	98.3	23.0	40.7
MGA_524	LOCUS_05240	sequence2:65688..65855(+)	internal_stop_codon	65502..65504(+),65679..65681(+),65853..65855(+)		WP_012257736.1	MoxR family ATPase	100.0	17.0	76.4
MGA_526	LOCUS_05260	sequence2:66144..66326(+)	internal_stop_codon	65853..65855(+),66129..66131(+),66114..66116(+)		WP_007326093.1	MoxR family ATPase	95.0	17.1	45.6
MGA_529	LOCUS_05290	sequence2:68446..68751(-)	internal_stop_codon	68767..68769(-),68914..68916(-),68764..68766(-),68917..68919(-)		WP_038967039.1	serine hydroxymethyltransferase	100.0	23.5	48.5
MGA_530	LOCUS_05300	sequence2:68767..68907(-)	internal_stop_codon	69121..69123(-),69124..69126(-),68767..68769(-),68914..68916(-),68917..68919(-),68764..68766(-),69157..69159(-),69106..69108(-)		WP_013533373.1	serine hydroxymethyltransferase	100.0	10.3	56.5
MGA_531	LOCUS_05310	sequence2:68917..69102(-)	internal_stop_codon	69121..69123(-),69124..69126(-),68767..68769(-),68914..68916(-),68917..68919(-),68764..68766(-),69157..69159(-),69106..69108(-)		WP_038967039.1	serine hydroxymethyltransferase	100.0	11.0	47.5
MGA_532	LOCUS_05320	sequence2:69157..69411(-)	internal_stop_codon	68914..68916(-),69121..69123(-),68917..68919(-),69541..69543(-),69124..69126(-),69106..69108(-),69157..69159(-)		WP_038967039.1	serine hydroxymethyltransferase	100.0	20.0	61.6
MGA_533	LOCUS_05330	sequence2:69541..69726(-)	internal_stop_codon	69541..69543(-)		WP_164924918.1	serine hydroxymethyltransferase	100.0	14.9	55.7
MGA_535	LOCUS_05350	sequence2:71059..71292(-)	internal_stop_codon	71347..71349(-),71443..71445(-),71059..71061(-)		WP_011962572.1	GH3 auxin-responsive promoter family protein	100.0	15.3	46.8
MGA_536	LOCUS_05360	sequence2:71443..71712(-)	internal_stop_codon	71974..71976(-),71806..71808(-),71830..71832(-),71971..71973(-),71914..71916(-),71833..71835(-),71443..71445(-),71347..71349(-),71983..71985(-)		WP_005783832.1	GH3 auxin-responsive promoter family protein	100.0	17.7	38.2
MGA_541	LOCUS_05410	sequence2:74300..74536(+)	internal_stop_codon	74534..74536(+)		WP_000908969.1	phenylalanine--tRNA ligase subunit beta	97.4	9.6	38.5
MGA_542	LOCUS_05420	sequence2:74543..74824(+)	frameshift,internal_stop_codon	74822..74824(+),74534..74536(+)	74848	WP_000777486.1	phenylalanine--tRNA ligase subunit beta	98.9	10.3	35.5
MGA_545	LOCUS_05450	sequence2:76997..77344(+)	internal_stop_codon	76988..76990(+),77342..77344(+)		WP_011120397.1	IS200/IS605 family transposase	99.1	75.0	35.1
MGA_552	LOCUS_05520	sequence2:80222..80506(-)	internal_stop_codon	80222..80224(-),80675..80677(-)		WP_012546013.1	type IV-A pilus assembly ATPase PilB	98.9	14.6	39.8
MGA_556	LOCUS_05560	sequence2:82725..83051(+)	internal_stop_codon	83049..83051(+)		WP_011837653.1	DNA mismatch repair protein MutS	97.2	12.5	56.6
MGA_561	LOCUS_05610	sequence2:85023..85217(+)	internal_stop_codon	84969..84971(+),84729..84731(+),85215..85217(+),84819..84821(+)		WP_012047675.1	DNA mismatch repair protein MutS	96.9	6.7	59.7
MGA_564	LOCUS_05640	sequence2:86735..86974(-)	internal_stop_codon	86978..86980(-),86735..86737(-),86660..86662(-)		WP_010880327.1	pseudouridine synthase	83.5	27.3	40.9
MGA_565	LOCUS_05650	sequence2:86978..87292(-)	internal_stop_codon	86978..86980(-),86735..86737(-)		WP_001053851.1	pseudouridine synthase	84.6	34.1	29.2
MGA_578	LOCUS_05780	sequence2:94448..94621(+)	internal_stop_codon	94619..94621(+),94223..94225(+),94436..94438(+),94364..94366(+),94400..94402(+)		WP_005812028.1	DedA family protein	98.2	27.3	50.0
MGA_600	LOCUS_06000	sequence2:112362..112667(+)	internal_stop_codon	112740..112742(+),112359..112361(+),112776..112778(+),112665..112667(+)		WP_012583170.1	peptide chain release factor 1	100.0	27.5	48.5
MGA_601	LOCUS_06010	sequence2:112824..113009(+)	internal_stop_codon	113238..113240(+),113007..113009(+),112740..112742(+),112776..112778(+),112665..112667(+)		WP_003546735.1	peptide chain release factor 1	96.7	16.3	55.9
MGA_604	LOCUS_06040	sequence2:114741..115013(+)	internal_stop_codon	115122..115124(+),115011..115013(+),114669..114671(+),114489..114491(+)		WP_011462257.1	CTP synthase	100.0	16.9	38.9
MGA_605	LOCUS_06050	sequence2:115512..115673(+)	internal_stop_codon	115365..115367(+),115380..115382(+),115362..115364(+),115407..115409(+)		WP_011126002.1	CTP synthase	90.6	8.7	68.8
MGA_608	LOCUS_06080	sequence2:118734..119123(-)	internal_stop_codon	119175..119177(-)		WP_011393940.1	elongation factor G	93.0	17.3	61.7
MGA_609	LOCUS_06090	sequence2:119175..119819(-)	internal_stop_codon	119841..119843(-),120042..120044(-),119175..119177(-)		WP_000101814.1	elongation factor G	100.0	31.1	61.9
MGA_610	LOCUS_06100	sequence2:119841..120008(-)	internal_stop_codon	119841..119843(-),120042..120044(-)		WP_011269094.1	elongation factor G	100.0	7.8	65.5
MGA_611	LOCUS_06110	sequence2:120042..120233(-)	internal_stop_codon	119841..119843(-),120042..120044(-),120276..120278(-)		WP_000101814.1	elongation factor G	100.0	9.1	52.4
MGA_612	LOCUS_06120	sequence2:120276..120527(-)	internal_stop_codon	120042..120044(-),120276..120278(-),120588..120590(-),120717..120719(-)		WP_003813832.1	elongation factor G	100.0	11.7	56.6
MGA_643	LOCUS_06420	sequence2:142711..143085(-)	internal_stop_codon	142711..142713(-),142678..142680(-),142576..142578(-),142705..142707(-),143125..143127(-),142621..142623(-)		WP_005783932.1	cysteine desulfurase	97.6	30.3	39.3
MGA_649	LOCUS_06480	sequence2:148239..148598(+)	internal_stop_codon	148596..148598(+),148797..148799(+)		WP_000766307.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	63.9	15.1	39.5
MGA_664	LOCUS_06630	sequence2:159677..159859(+)	internal_stop_codon	159857..159859(+),160058..160060(+),160034..160036(+)		WP_011674333.1	excinuclease ABC subunit UvrA	90.0	5.7	49.1
MGA_665	LOCUS_06640	sequence2:159866..160036(+)	internal_stop_codon	160241..160243(+),160262..160264(+),159857..159859(+),160058..160060(+),160034..160036(+)		WP_004081486.1	excinuclease ABC subunit UvrA	100.0	6.1	51.8
MGA_667	LOCUS_06660	sequence2:160409..160633(+)	internal_stop_codon	160631..160633(+),160787..160789(+),160670..160672(+)		WP_214185119.1	excinuclease ABC subunit UvrA	74.3	2.8	56.4
MGA_669	LOCUS_06680	sequence2:161015..161194(+)	internal_stop_codon	160955..160957(+),160787..160789(+)		WP_011836518.1	excinuclease ABC subunit UvrA	86.4	5.4	58.8
MGA_670	LOCUS_06690	sequence2:161706..162209(+)	internal_stop_codon	161490..161492(+),162207..162209(+),161700..161702(+)		WP_005902867.1	DUF1846 domain-containing protein	92.8	30.0	47.7
MGA_677	LOCUS_06760	sequence2:166434..166850(+)	internal_stop_codon	166908..166910(+),166848..166850(+),166851..166853(+),166989..166991(+)		WP_012583596.1	ATP-binding protein	97.8	40.3	28.6
MGA_678	LOCUS_06770	sequence2:167132..167299(+)	internal_stop_codon	167297..167299(+),167399..167401(+)		WP_005817393.1	response regulator transcription factor	100.0	23.9	49.1
MGA_683	LOCUS_06820	sequence2:172100..172384(+)	internal_stop_codon	172382..172384(+)		WP_011016546.1	tRNA pseudouridine(55) synthase TruB	84.0	27.5	48.1
MGA_684	LOCUS_06830	sequence2:172403..172693(+)	internal_stop_codon	172382..172384(+),172691..172693(+)		WP_010882967.1	tRNA pseudouridine(55) synthase TruB	69.8	28.5	47.1
MGA_686	LOCUS_06850	sequence2:173419..174039(+)	partial			WP_011962393.1	isoleucine--tRNA ligase	94.7	17.5	30.2
MGA_687	LOCUS_06860	sequence2:174140..174529(+)	partial			WP_010965706.1	recombination regulator RecX	93.0	56.5	34.1
MGA_688	LOCUS_06870	sequence2:175171..175422(+)	internal_stop_codon	175030..175032(+),174922..174924(+),175114..175116(+),175021..175023(+),175069..175071(+)		WP_012048090.1	YebC/PmpR family DNA-binding transcriptional regulator	89.2	30.1	35.1
MGA_700	LOCUS_06990	sequence2:181557..182651(-)	internal_stop_codon	182838..182840(-),181557..181559(-),182784..182786(-),181425..181427(-)		WP_004599517.1	valine--tRNA ligase	99.2	45.0	44.7
MGA_701	LOCUS_07000	sequence2:182838..183131(-)	internal_stop_codon	182838..182840(-),182784..182786(-)		WP_004599517.1	valine--tRNA ligase	91.8	11.1	61.1
MGA_709	LOCUS_07080	sequence2:188721..189086(+)	internal_stop_codon	189084..189086(+),189165..189167(+),189366..189368(+),188676..188678(+)		WP_003105560.1	tRNA 5-hydroxyuridine modification protein YegQ	98.3	25.6	36.1
MGA_743	LOCUS_07420	sequence2:210228..210743(+)	partial			WP_011964501.1	fibronectin type III domain-containing protein	94.7	8.2	29.9
MGA_744	LOCUS_07430	sequence2:210801..212246(+)	partial			WP_011962187.1	T9SS type A sorting domain-containing protein	77.5	47.5	24.4
MGA_745	LOCUS_07440	sequence2:212322..214373(+)	partial			WP_011962848.1	immunoglobulin domain-containing protein	79.5	23.8	26.2
MGA_746	LOCUS_07450	sequence2:214911..215048(+)	internal_stop_codon	215046..215048(+),214782..214784(+),214887..214889(+)		WP_012258226.1	30S ribosomal protein S12	100.0	30.8	77.8
MGA_747	LOCUS_07460	sequence2:215548..215739(+)	internal_stop_codon	215503..215505(+),215359..215361(+)		WP_004081843.1	30S ribosomal protein S7	85.7	34.8	59.3
MGA_762	LOCUS_07610	sequence3:5503..5733(+)	internal_stop_codon	5731..5733(+),5812..5814(+),5860..5862(+),5782..5784(+)		WP_003567155.1	50S ribosomal protein L11	96.1	47.5	49.3
MGA_763	LOCUS_07620	sequence3:6015..6287(+)	internal_stop_codon	6285..6287(+),6333..6335(+)		WP_011393948.1	50S ribosomal protein L1	97.8	37.7	50.0
MGA_764	LOCUS_07630	sequence3:6351..6695(+)	internal_stop_codon	6285..6287(+),6333..6335(+)		WP_004081511.1	50S ribosomal protein L1	96.5	47.2	50.0
MGA_769	LOCUS_07680	sequence3:10800..11012(-)	internal_stop_codon	11094..11096(-),10800..10802(-)		WP_010877972.1	DNA gyrase subunit A	100.0	8.9	37.1
MGA_770	LOCUS_07690	sequence3:11094..11516(-)	internal_stop_codon	11577..11579(-),11094..11096(-),11526..11528(-),11580..11582(-),11598..11600(-),11646..11648(-)		WP_010926826.1	DNA gyrase subunit A	100.0	15.7	51.4
MGA_771	LOCUS_07700	sequence3:11646..11798(-)	internal_stop_codon	11577..11579(-),12009..12011(-),11580..11582(-),11526..11528(-),11940..11942(-),12057..12059(-),11817..11819(-),11598..11600(-),11646..11648(-)		WP_002361457.1	DNA gyrase subunit A	74.0	4.4	70.3
MGA_773	LOCUS_07720	sequence3:12969..13412(+)	frameshift,internal_stop_codon	12939..12941(+),12918..12920(+),13410..13412(+),13653..13655(+)	12853	WP_011404996.1	cation:proton antiporter	99.3	27.5	28.6
MGA_778	LOCUS_07770	sequence3:20072..20233(+)	internal_stop_codon	20231..20233(+),19970..19972(+),20051..20053(+),20063..20065(+),20045..20047(+),20345..20347(+),20426..20428(+),20255..20257(+)		WP_010919792.1	DNA polymerase III subunit alpha	100.0	4.6	71.7
MGA_780	LOCUS_07790	sequence3:20846..21184(+)	internal_stop_codon	20618..20620(+),21182..21184(+),20843..20845(+),20597..20599(+)		WP_011403739.1	DNA polymerase III subunit alpha	100.0	7.5	50.0
MGA_781	LOCUS_07800	sequence3:21296..21574(+)	internal_stop_codon	21692..21694(+),21182..21184(+),21578..21580(+),21623..21625(+),21707..21709(+),21572..21574(+)		WP_011949166.1	DNA polymerase III subunit alpha	94.6	7.3	51.7
MGA_787	LOCUS_07860	sequence3:24229..24519(+)	internal_stop_codon	24517..24519(+),24685..24687(+),24787..24789(+),24703..24705(+)		WP_012259098.1	sugar transferase	82.3	15.8	41.8
MGA_788	LOCUS_07870	sequence3:25031..25195(+)	internal_stop_codon	25193..25195(+),25364..25366(+),25256..25258(+),25349..25351(+),25247..25249(+),25295..25297(+)		WP_012870231.1	four helix bundle protein	98.1	42.7	56.6
MGA_792	LOCUS_07910	sequence3:26906..27400(+)	internal_stop_codon	27485..27487(+),27398..27400(+)		WP_003233916.1	NAD-dependent DNA ligase LigA	97.6	24.1	43.2
MGA_793	LOCUS_07920	sequence3:27509..27901(+)	internal_stop_codon	27485..27487(+),27398..27400(+)		WP_011056701.1	NAD-dependent DNA ligase LigA	99.2	19.3	28.4
MGA_796	LOCUS_07950	sequence3:29599..29907(-)	internal_stop_codon	29599..29601(-),29953..29955(-)		WP_010970645.1	translation initiation factor IF-2	87.3	9.7	30.3
MGA_797	LOCUS_07960	sequence3:30748..30915(-)	internal_stop_codon	30661..30663(-),30748..30750(-),30460..30462(-),30583..30585(-),31081..31083(-),30919..30921(-)		WP_002225000.1	translation initiation factor IF-2	89.1	5.5	69.8
MGA_810	LOCUS_08090	sequence3:38757..39287(+)	internal_stop_codon	39285..39287(+),38631..38633(+)		WP_003857429.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	100.0	35.7	41.1
MGA_811	LOCUS_08100	sequence3:39603..39899(+)	internal_stop_codon	40002..40004(+),39897..39899(+)		WP_010978127.1	polyprenyl diphosphate synthase	98.0	37.0	31.6
MGA_819	LOCUS_08180	sequence3:47394..47876(+)	internal_stop_codon	47307..47309(+),47148..47150(+),47874..47876(+)		WP_003731982.1	cell division protein FtsZ	100.0	40.9	54.4
MGA_825	LOCUS_08240	sequence3:53716..54045(-)	partial			WP_010965691.1	undecaprenyl-diphosphatase	74.3	41.0	38.3
MGA_827	LOCUS_08260	sequence3:54326..54577(-)	internal_stop_codon	54614..54616(-)		WP_004083173.1	endonuclease III	95.2	37.1	49.4
MGA_828	LOCUS_08270	sequence3:54614..54991(-)	internal_stop_codon	54614..54616(-)		WP_012583053.1	endonuclease III	100.0	54.8	42.5
MGA_829	LOCUS_08280	sequence3:55759..56451(+)	internal_stop_codon	56449..56451(+),56572..56574(+)		WP_002899360.1	ATPase, T2SS/T4P/T4SS family	96.1	40.4	44.7
MGA_833	LOCUS_08320	sequence3:57865..58200(+)	internal_stop_codon	57835..57837(+)		WP_010957409.1	type II secretion system F family protein	74.8	23.6	31.3
MGA_838	LOCUS_08370	sequence3:60964..61239(+)	internal_stop_codon	61237..61239(+)		WP_011249682.1	Fe-S cluster assembly ATPase SufC	100.0	37.0	48.4
MGA_839	LOCUS_08380	sequence3:61333..61635(+)	internal_stop_codon	61237..61239(+)		WP_013532160.1	Fe-S cluster assembly ATPase SufC	96.0	38.2	54.2
MGA_841	LOCUS_08400	sequence3:63452..63655(+)	internal_stop_codon	63230..63232(+),63296..63298(+),63377..63379(+)		WP_011963886.1	DUF1003 domain-containing protein	100.0	29.1	47.8
MGA_851	LOCUS_08500	sequence3:69951..70382(-)	partial			WP_011705903.1	AAA family ATPase	51.0	14.7	38.1
MGA_855	LOCUS_08540	sequence3:72987..73274(+)	internal_stop_codon	72960..72962(+)		WP_164925054.1	nitronate monooxygenase family protein	68.4	18.2	52.3
MGA_862	LOCUS_08610	sequence3:81640..81963(-)	partial			WP_011705670.1	TPM domain-containing protein	86.0	38.4	44.1
MGA_863	LOCUS_08620	sequence3:82241..82465(-)	internal_stop_codon	82241..82243(-),82481..82483(-),82595..82597(-)		WP_005903028.1	replicative DNA helicase	98.6	16.4	74.0
MGA_864	LOCUS_08630	sequence3:82595..82837(-)	internal_stop_codon	82994..82996(-),82481..82483(-),82595..82597(-),82880..82882(-)		WP_010880953.1	replicative DNA helicase	98.8	16.9	46.8
MGA_866	LOCUS_08650	sequence3:83937..84299(-)	internal_stop_codon	84423..84425(-),83745..83747(-),84315..84317(-),83703..83705(-),83802..83804(-),84330..84332(-),83937..83939(-),84363..84365(-)		WP_010870852.1	UTP--glucose-1-phosphate uridylyltransferase GalU	96.7	41.0	37.9
MGA_869	LOCUS_08680	sequence3:85546..85803(-)	frameshift,internal_stop_codon	85742..85744(-),85546..85548(-),85471..85473(-),85414..85416(-)	85738	WP_013385794.1	M20/M25/M40 family metallo-hydrolase	69.4	13.2	45.8
MGA_870	LOCUS_08690	sequence3:85928..86398(-)	partial			WP_002679870.1	tetratricopeptide repeat protein	89.7	34.1	22.5
MGA_873	LOCUS_08720	sequence3:87844..88140(-)	internal_stop_codon	88183..88185(-),88231..88233(-),88234..88236(-)		WP_005784860.1	ATP-dependent zinc metalloprotease FtsH	80.6	12.5	42.2
MGA_874	LOCUS_08730	sequence3:88234..88803(-)	internal_stop_codon	88231..88233(-),88858..88860(-),89026..89028(-),88234..88236(-),89086..89088(-),88183..88185(-),88960..88962(-),88849..88851(-)		WP_012583233.1	ATP-dependent zinc metalloprotease FtsH	100.0	31.1	50.8
MGA_875	LOCUS_08740	sequence3:89086..89226(-)	internal_stop_codon	88858..88860(-),89026..89028(-),89323..89325(-),89086..89088(-),89254..89256(-),88960..88962(-),89230..89232(-),88849..88851(-)		WP_003132177.1	ATP-dependent zinc metalloprotease FtsH	93.5	6.2	67.4
MGA_878	LOCUS_08770	sequence3:90971..91459(+)	internal_stop_codon	91622..91624(+),91463..91465(+),90962..90964(+),91637..91639(+),90965..90967(+),91694..91696(+),91517..91519(+),91457..91459(+)		WP_012583501.1	ATP-dependent DNA helicase RecG	98.8	20.3	32.5
MGA_879	LOCUS_08780	sequence3:91853..92131(+)	internal_stop_codon	91622..91624(+),92129..92131(+),91694..91696(+),91805..91807(+),91772..91774(+),91637..91639(+),92180..92182(+)		WP_012583501.1	ATP-dependent DNA helicase RecG	100.0	11.4	50.0
MGA_880	LOCUS_08790	sequence3:92198..92464(+)	internal_stop_codon	92477..92479(+),92129..92131(+),92180..92182(+),92462..92464(+),92540..92542(+)		WP_011141278.1	ATP-dependent DNA helicase RecG	100.0	10.9	58.0
MGA_892	LOCUS_08910	sequence3:99929..100174(-)	internal_stop_codon	99905..99907(-),99812..99814(-),99929..99931(-),99764..99766(-),99791..99793(-)		WP_037394042.1	uracil-DNA glycosylase	76.5	25.7	46.8
MGA_894	LOCUS_08930	sequence3:101993..102361(+)	internal_stop_codon	102359..102361(+)		WP_010870660.1	ADP-ribose pyrophosphatase	76.2	55.6	44.2
MGA_895	LOCUS_08940	sequence3:103297..103524(+)	internal_stop_codon	103522..103524(+),103639..103641(+)		WP_011861665.1	single-stranded-DNA-specific exonuclease RecJ	100.0	8.8	53.3
MGA_900	LOCUS_08990	sequence3:108223..108507(-)	internal_stop_codon	107935..107937(-),108181..108183(-),108115..108117(-),108160..108162(-),108091..108093(-),108223..108225(-),108511..108513(-),108715..108717(-),108721..108723(-)		WP_014206185.1	alanine--tRNA ligase	100.0	10.6	36.2
MGA_901	LOCUS_09000	sequence3:109024..109410(-)	internal_stop_codon	108895..108897(-),109024..109026(-),108988..108990(-),108904..108906(-)		WP_002679355.1	alanine--tRNA ligase	99.2	21.5	54.3
MGA_912	LOCUS_09110	sequence3:115324..115698(+)	internal_stop_codon	115696..115698(+)		WP_010963838.1	DNA polymerase III subunit alpha	96.0	10.5	45.9
MGA_913	LOCUS_09120	sequence3:115747..116265(+)	internal_stop_codon	115696..115698(+)		WP_011227759.1	DNA polymerase III subunit alpha	88.4	7.0	27.6
MGA_919	LOCUS_09180	sequence3:119815..120081(+)	internal_stop_codon	119641..119643(+),119761..119763(+),120079..120081(+)		WP_011922262.1	DNA helicase PcrA	97.7	11.3	52.3
MGA_921	LOCUS_09200	sequence3:120919..121260(+)	partial			WP_005817187.1	DNA helicase PcrA	95.6	14.2	52.8
MGA_934	LOCUS_09330	sequence3:129251..129397(-)	internal_stop_codon	129494..129496(-),129515..129517(-),129443..129445(-),129524..129526(-),129551..129553(-),129473..129475(-)		WP_012545344.1	MBL fold metallo-hydrolase	100.0	24.3	54.0
MGA_935	LOCUS_09340	sequence3:129551..129844(-)	internal_stop_codon	129494..129496(-),129515..129517(-),129443..129445(-),129524..129526(-),129551..129553(-),129848..129850(-),129473..129475(-)		WP_012545344.1	MBL fold metallo-hydrolase	90.7	41.3	39.8
MGA_936	LOCUS_09350	sequence3:130194..130457(-)	internal_stop_codon	130527..130529(-),129972..129974(-),130053..130055(-),130476..130478(-),130074..130076(-),130194..130196(-)		WP_010875851.1	exodeoxyribonuclease III	97.7	31.9	51.8
MGA_937	LOCUS_09360	sequence3:130527..130721(-)	internal_stop_codon	130527..130529(-),130476..130478(-)		WP_011962243.1	exodeoxyribonuclease III	71.9	18.2	56.5
MGA_938	LOCUS_09370	sequence3:131735..131908(-)	internal_stop_codon	131540..131542(-),131519..131521(-),131735..131737(-),131918..131920(-),131666..131668(-),132038..132040(-),131528..131530(-),131513..131515(-),131993..131995(-),132194..132196(-)		WP_000402038.1	magnesium-translocating P-type ATPase	100.0	6.6	42.1
MGA_939	LOCUS_09380	sequence3:132374..132532(-)	internal_stop_codon	132374..132376(-),132650..132652(-),132209..132211(-),132221..132223(-),132563..132565(-),132335..132337(-),132194..132196(-)		WP_004547389.1	magnesium-translocating P-type ATPase	94.2	5.3	51.0
MGA_940	LOCUS_09390	sequence3:132722..133006(-)	internal_stop_codon	132722..132724(-),132650..132652(-),133046..133048(-),133118..133120(-),132563..132565(-)		WP_000402038.1	magnesium-translocating P-type ATPase	97.9	10.9	45.7
MGA_942	LOCUS_09410	sequence3:133930..134319(-)	internal_stop_codon	133930..133932(-),133783..133785(-)		WP_004081612.1	alanine--tRNA ligase	68.2	10.3	49.4
MGA_943	LOCUS_09420	sequence3:135610..135759(-)	internal_stop_codon	135445..135447(-),135610..135612(-),135514..135516(-),135847..135849(-),135895..135897(-)		WP_011338512.1	aspartate--tRNA ligase	100.0	8.3	71.4
MGA_956	LOCUS_09550	sequence3:144845..145069(-)	partial			WP_004254651.1	HIT family protein	95.9	55.6	40.5
MGA_957	LOCUS_09560	sequence3:145878..146075(+)	internal_stop_codon	145875..145877(+),146235..146237(+),146160..146162(+),146073..146075(+)		WP_000287157.1	glycine--tRNA ligase	69.2	9.8	68.9
MGA_959	LOCUS_09580	sequence3:146910..147134(+)	internal_stop_codon	146817..146819(+),146748..146750(+)		WP_010966472.1	glycine--tRNA ligase	93.2	14.9	52.2
MGA_965	LOCUS_09640	sequence3:151608..152042(-)	internal_stop_codon	152265..152267(-),152259..152261(-),152118..152120(-),152196..152198(-),152064..152066(-)		WP_011228260.1	serine--tRNA ligase	97.9	33.5	52.5
MGA_966	LOCUS_09650	sequence3:152403..152630(-)	internal_stop_codon	152265..152267(-),152118..152120(-),152661..152663(-),152316..152318(-),152259..152261(-),152631..152633(-),152196..152198(-),152643..152645(-),152403..152405(-)		WP_012583734.1	serine--tRNA ligase	94.7	16.5	43.7
MGA_970	LOCUS_09690	sequence3:154922..155428(-)	internal_stop_codon	154850..154852(-),154703..154705(-),155477..155479(-),155549..155551(-),154922..154924(-),154835..154837(-),154877..154879(-),155474..155476(-)		WP_000431277.1	histidine--tRNA ligase	99.4	37.8	38.2
MGA_976	LOCUS_09750	sequence3:158998..159168(-)	internal_stop_codon	159217..159219(-),158974..158976(-),158998..159000(-),158785..158787(-),158833..158835(-)		WP_000190138.1	2-oxoacid:ferredoxin oxidoreductase subunit beta	100.0	19.4	53.6
MGA_978	LOCUS_09770	sequence3:159966..160244(-)	internal_stop_codon	160452..160454(-),160365..160367(-),160287..160289(-),159966..159968(-),160437..160439(-),160257..160259(-),159840..159842(-)		WP_000625418.1	2-oxoacid:acceptor oxidoreductase subunit alpha	100.0	15.2	35.5
MGA_991	LOCUS_09900	sequence3:174777..174971(+)	internal_stop_codon	174996..174998(+),174969..174971(+),175014..175016(+),174972..174974(+)		WP_013399469.1	glycosyltransferase	96.9	16.8	42.9
MGA_997	LOCUS_09960	sequence3:181538..181681(-)	internal_stop_codon	181517..181519(-),181286..181288(-),181772..181774(-),181343..181345(-),181436..181438(-),181538..181540(-),181310..181312(-),181688..181690(-)		WP_013229534.1	glycosyltransferase family 2 protein	100.0	14.1	57.4
MGA_999	LOCUS_09980	sequence3:185350..185685(-)	partial			WP_012257829.1	glycosyltransferase family 9 protein	79.3	23.0	39.6
MGA_1008	LOCUS_10070	sequence3:192498..192722(-)	internal_stop_codon	192294..192296(-),192393..192395(-),192474..192476(-),192333..192335(-),192498..192500(-)		WP_012048038.1	DNA polymerase I	94.6	8.1	45.1
MGA_1020	LOCUS_10190	sequence3:200432..200944(+)	internal_stop_codon	200942..200944(+),200996..200998(+)		WP_012546187.1	DNA primase	96.5	28.4	43.1
MGA_1021	LOCUS_10200	sequence3:201053..201442(+)	internal_stop_codon	200942..200944(+),200996..200998(+)		WP_010933252.1	DNA primase	96.9	20.2	42.9
MGA_1025	LOCUS_10240	sequence4:888..1268(+)	internal_stop_codon	780..782(+),843..845(+),1266..1268(+),1428..1430(+)		WP_000432161.1	asparagine--tRNA ligase	99.2	27.0	62.4
MGA_1026	LOCUS_10250	sequence4:1470..1667(+)	internal_stop_codon	1266..1268(+),1428..1430(+)		WP_010869177.1	asparagine--tRNA ligase	100.0	13.9	64.6
MGA_1027	LOCUS_10260	sequence4:1687..1917(+)	internal_stop_codon	1924..1926(+),1948..1950(+),1915..1917(+)		WP_003723834.1	HIT family protein	100.0	54.3	42.1
MGA_1032	LOCUS_10310	sequence4:4061..4306(+)	internal_stop_codon	4304..4306(+),4334..4336(+)		WP_206817527.1	prolyl-tRNA synthetase associated domain-containing protein	85.2	42.1	49.3
MGA_1034	LOCUS_10330	sequence4:5269..5541(-)	internal_stop_codon	5722..5724(-),5560..5562(-),5587..5589(-)		WP_009895217.1	Tex family protein	52.2	6.6	53.2
MGA_1035	LOCUS_10340	sequence4:5902..6042(-)	internal_stop_codon	5782..5784(-),6043..6045(-),5722..5724(-),5821..5823(-),5902..5904(-)		WP_003640903.1	Tex family protein	97.8	6.2	71.1
MGA_1036	LOCUS_10350	sequence4:6043..6963(-)	internal_stop_codon	6043..6045(-),7087..7089(-),6964..6966(-),7132..7134(-),5902..5904(-)		WP_009895217.1	Tex family protein	100.0	41.9	53.9
MGA_1037	LOCUS_10360	sequence4:7132..7341(-)	internal_stop_codon	7087..7089(-),7447..7449(-),7345..7347(-),6964..6966(-),7132..7134(-)		WP_010905263.1	Tex family protein	98.6	9.1	48.5
MGA_1038	LOCUS_10370	sequence4:7447..7671(-)	internal_stop_codon	7447..7449(-),7345..7347(-)		WP_011260984.1	Tex family protein	55.4	5.3	56.1
MGA_1045	LOCUS_10440	sequence4:14081..14332(+)	internal_stop_codon	14330..14332(+),14492..14494(+),14525..14527(+)		WP_010931082.1	NAD+ synthase	80.7	12.5	44.1
MGA_1046	LOCUS_10450	sequence4:14531..14782(+)	internal_stop_codon	14984..14986(+),14927..14929(+),14525..14527(+),14954..14956(+),14900..14902(+),14780..14782(+),14492..14494(+)		WP_180947096.1	NAD+ synthase	97.6	13.8	46.9
MGA_1050	LOCUS_10490	sequence4:17289..17633(+)	internal_stop_codon	17283..17285(+)		WP_010880938.1	NUDIX hydrolase	96.5	76.3	40.0
MGA_1053	LOCUS_10520	sequence4:20405..20848(+)	internal_stop_codon	20846..20848(+),20993..20995(+),21038..21040(+),20852..20854(+),20849..20851(+),20942..20944(+)		WP_003547135.1	DNA-processing protein DprA	88.4	49.1	33.3
MGA_1056	LOCUS_10550	sequence4:22574..22858(-)	internal_stop_codon	22475..22477(-),22364..22366(-),23039..23041(-),22877..22879(-),23033..23035(-),22868..22870(-),23036..23038(-),22565..22567(-),22466..22468(-),22574..22576(-)		WP_011262798.1	UDP-N-acetylmuramate dehydrogenase	97.9	25.5	48.9
MGA_1060	LOCUS_10590	sequence4:24557..24961(-)	internal_stop_codon	24488..24490(-),24986..24988(-),24554..24556(-),24557..24559(-)		WP_002361260.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	93.3	25.4	40.2
MGA_1061	LOCUS_10600	sequence4:24986..25348(-)	internal_stop_codon	24986..24988(-)		WP_003434581.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	99.2	22.3	34.4
MGA_1076	LOCUS_10750	sequence4:33438..33941(-)	internal_stop_codon	33999..34001(-),33957..33959(-)		WP_012869903.1	30S ribosomal protein S4	98.2	76.9	37.6
MGA_1077	LOCUS_10760	sequence4:34705..34923(-)	internal_stop_codon	34933..34935(-),34705..34707(-)		WP_011036133.1	30S ribosomal protein S13	97.2	59.3	47.1
MGA_1083	LOCUS_10820	sequence4:40153..40455(+)	internal_stop_codon	39976..39978(+),40561..40563(+),40495..40497(+),40519..40521(+),40453..40455(+)		WP_012583257.1	calcium-translocating P-type ATPase, PMCA-type	90.0	10.3	52.2
MGA_1085	LOCUS_10840	sequence4:41110..41295(+)	internal_stop_codon	40942..40944(+),40894..40896(+),41293..41295(+),41023..41025(+),41506..41508(+),40939..40941(+),40969..40971(+)		WP_009902789.1	cation-translocating P-type ATPase	93.4	6.4	50.9
MGA_1087	LOCUS_10860	sequence4:41725..41973(+)	internal_stop_codon	42178..42180(+),42031..42033(+),41971..41973(+),41506..41508(+),41680..41682(+),41599..41601(+)		WP_012545920.1	cation-transporting P-type ATPase	96.3	8.9	65.8
MGA_1088	LOCUS_10870	sequence4:42915..43145(+)	internal_stop_codon	43143..43145(+),42894..42896(+),43305..43307(+)		WP_010943440.1	rubrerythrin family protein	100.0	35.8	51.3
MGA_1091	LOCUS_10900	sequence4:45804..46088(-)	internal_stop_codon	45804..45806(-),46353..46355(-),46098..46100(-),45720..45722(-)		WP_001033293.1	YadA-like family protein	98.9	5.6	30.1
MGA_1092	LOCUS_10910	sequence4:46098..46337(-)	internal_stop_codon	46521..46523(-),46395..46397(-),46098..46100(-),46437..46439(-),46353..46355(-)		WP_013529839.1	YadA-like family protein	96.2	4.8	40.8
MGA_1094	LOCUS_10930	sequence4:47310..47714(-)	frameshift,internal_stop_codon	47187..47189(-),47247..47249(-),47778..47780(-),47285..47287(-),47730..47732(-),47267..47269(-),47775..47777(-),47286..47288(-),47309..47311(-),47268..47270(-),47246..47248(-),47249..47251(-),47186..47188(-),47250..47252(-),47310..47312(-)	47728,47722,47780	WP_011035898.1	ESPR-type extended signal peptide-containing protein	100.0	5.4	40.3
MGA_1095	LOCUS_10940	sequence4:47778..48008(-)	internal_stop_codon	47730..47732(-),47778..47780(-),47775..47777(-)		WP_133116924.1	YadA-like family protein	96.1	4.7	45.2
MGA_1098	LOCUS_10970	sequence4:49633..49842(+)	internal_stop_codon	49840..49842(+)		WP_002379610.1	glycosyltransferase family 2 protein	100.0	27.4	44.9
MGA_1099	LOCUS_10980	sequence4:50817..51278(+)	internal_stop_codon	51423..51425(+),51432..51434(+),51276..51278(+)		WP_012258113.1	molecular chaperone DnaK	98.7	24.8	58.1
MGA_1100	LOCUS_10990	sequence4:51951..52124(+)	internal_stop_codon	52122..52124(+),52302..52304(+),51816..51818(+),52158..52160(+),51945..51947(+)		WP_007326035.1	molecular chaperone DnaK	96.5	8.5	69.1
MGA_1101	LOCUS_11000	sequence4:52161..52304(+)	internal_stop_codon	52302..52304(+),52122..52124(+),52158..52160(+),51945..51947(+)		WP_005694297.1	molecular chaperone DnaK	97.9	7.2	71.7
MGA_1105	LOCUS_11040	sequence4:53525..53935(+)	partial			WP_010940497.1	phosphatase PAP2 family protein	91.2	60.2	28.4
MGA_1107	LOCUS_11060	sequence4:55692..56063(+)	internal_stop_codon	56061..56063(+),55686..55688(+),55473..55475(+),56202..56204(+)		WP_010991905.1	THUMP domain-containing protein	82.9	23.1	47.6
MGA_1110	LOCUS_11090	sequence4:56784..57008(+)	internal_stop_codon	57057..57059(+),56760..56762(+),57006..57008(+)		WP_004082231.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	98.6	22.2	46.1
MGA_1111	LOCUS_11100	sequence4:57060..57584(+)	internal_stop_codon	57057..57059(+),57006..57008(+),57582..57584(+)		WP_012583788.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	100.0	49.7	48.9
MGA_1120	LOCUS_11190	sequence4:65540..65797(-)	internal_stop_codon	65840..65842(-),65855..65857(-)		WP_003976011.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	100.0	14.0	51.8
MGA_1121	LOCUS_11200	sequence4:65855..66082(-)	internal_stop_codon	65855..65857(-),66161..66163(-),65840..65842(-),66095..66097(-),66254..66256(-)		WP_003976011.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	90.7	11.2	39.7
MGA_1122	LOCUS_11210	sequence4:66254..66412(-)	internal_stop_codon	66431..66433(-),66455..66457(-),66422..66424(-),66542..66544(-),66161..66163(-),66095..66097(-),66254..66256(-)		WP_011269442.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	98.1	8.3	51.0
MGA_1123	LOCUS_11220	sequence4:67721..68029(-)	internal_stop_codon	67721..67723(-),68114..68116(-),68117..68119(-),67706..67708(-),68066..68068(-)		WP_010989856.1	SDR family oxidoreductase	89.2	34.6	31.9
MGA_1125	LOCUS_11240	sequence4:68753..69361(-)	internal_stop_codon	68753..68755(-),69377..69379(-)		WP_003643180.1	leucine--tRNA ligase	97.5	25.1	47.3
MGA_1126	LOCUS_11250	sequence4:69377..69673(-)	internal_stop_codon	69377..69379(-),69698..69700(-),69881..69883(-),69872..69874(-)		WP_003548508.1	leucine--tRNA ligase	100.0	12.2	52.0
MGA_1127	LOCUS_11260	sequence4:69698..69853(-)	internal_stop_codon	69698..69700(-),69881..69883(-),69872..69874(-)		WP_005112800.1	leucine--tRNA ligase	90.2	4.8	60.9
MGA_1130	LOCUS_11290	sequence4:70865..71014(-)	internal_stop_codon	71036..71038(-),70640..70642(-),70865..70867(-),70751..70753(-)		WP_011183388.1	leucine--tRNA ligase	100.0	6.1	59.2
MGA_1131	LOCUS_11300	sequence4:71036..71488(-)	internal_stop_codon	71552..71554(-),71036..71038(-),71522..71524(-)		WP_011122073.1	leucine--tRNA ligase	96.7	15.2	43.2
MGA_1134	LOCUS_11330	sequence4:73062..73319(+)	internal_stop_codon	72933..72935(+),73317..73319(+),72858..72860(+),73056..73058(+),73467..73469(+)		WP_002225165.1	DNA translocase FtsK	84.7	8.9	58.3
MGA_1135	LOCUS_11340	sequence4:73476..73715(+)	internal_stop_codon	73713..73715(+),73722..73724(+),73317..73319(+),73467..73469(+),73746..73748(+)		WP_164927087.1	DNA translocase FtsK	100.0	9.4	63.3
MGA_1136	LOCUS_11350	sequence4:73752..74096(+)	internal_stop_codon	73713..73715(+),73722..73724(+),74094..74096(+),74115..74117(+),73746..73748(+)		WP_010965118.1	DNA translocase FtsK	100.0	13.3	40.4
MGA_1150	LOCUS_11490	sequence4:82518..82736(-)	internal_stop_codon	82518..82520(-),82740..82742(-),82437..82439(-)		WP_003856555.1	geranylgeranyl pyrophosphate synthase IdsA	98.6	19.4	35.2
MGA_1162	LOCUS_11610	sequence4:90706..91014(+)	internal_stop_codon	91012..91014(+)		WP_000384893.1	arginine--tRNA ligase	82.4	15.3	51.2
MGA_1163	LOCUS_11620	sequence4:91039..91524(+)	internal_stop_codon	91012..91014(+),91690..91692(+),91522..91524(+),91558..91560(+)		WP_011250186.1	arginine--tRNA ligase	99.4	26.6	35.5
MGA_1166	LOCUS_11650	sequence4:92380..92595(+)	internal_stop_codon	92239..92241(+),92296..92298(+)		WP_002288432.1	arginine--tRNA ligase	98.6	12.3	45.7
MGA_1167	LOCUS_11660	sequence4:93122..93319(+)	internal_stop_codon	93440..93442(+),92930..92932(+),93071..93073(+),93317..93319(+),92933..92935(+)		WP_010921794.1	tyrosine--tRNA ligase	100.0	14.8	58.5
MGA_1168	LOCUS_11670	sequence4:93512..93838(+)	internal_stop_codon	93440..93442(+),93317..93319(+),93836..93838(+)		WP_011962338.1	tyrosine--tRNA ligase	65.7	16.5	43.7
MGA_1170	LOCUS_11690	sequence4:95115..95483(+)	internal_stop_codon	95676..95678(+),95730..95732(+),95481..95483(+),95505..95507(+),95745..95747(+)		WP_118839265.1	protein translocase subunit SecD	79.5	14.8	32.0
MGA_1179	LOCUS_11780	sequence4:99778..100206(+)	internal_stop_codon	100204..100206(+)		WP_003564662.1	elongation factor P	98.6	74.9	32.9
MGA_1180	LOCUS_11790	sequence4:100473..100841(-)	internal_stop_codon	100848..100850(-),101103..101105(-)		WP_011964115.1	lytic transglycosylase domain-containing protein	68.0	28.1	48.2
MGA_1181	LOCUS_11800	sequence4:100848..101093(-)	internal_stop_codon	100848..100850(-)		WP_055217507.1	lytic transglycosylase domain-containing protein	96.3	23.9	46.2
MGA_1182	LOCUS_11810	sequence4:102242..102496(+)	internal_stop_codon	102218..102220(+),102497..102499(+),102593..102595(+),102227..102229(+),102494..102496(+),102137..102139(+)		WP_007333582.1	phosphate propanoyltransferase	100.0	35.3	40.0
MGA_1184	LOCUS_11830	sequence4:103571..103858(-)	internal_stop_codon	103967..103969(-),103910..103912(-),103571..103573(-),104120..104122(-),103985..103987(-),103997..103999(-)		WP_012584046.1	anaerobic ribonucleoside-triphosphate reductase activating protein	100.0	42.5	34.0
MGA_1186	LOCUS_11850	sequence4:105451..105672(-)	partial			WP_009931260.1	anaerobic ribonucleoside-triphosphate reductase	49.3	51.4	63.9
MGA_1187	LOCUS_11860	sequence4:105829..105987(-)	internal_stop_codon	105994..105996(-)		WP_011389031.1	ribonucleoside triphosphate reductase	100.0	7.7	59.6
MGA_1188	LOCUS_11870	sequence4:105994..106284(-)	internal_stop_codon	105994..105996(-),106516..106518(-),106426..106428(-)		WP_004192163.1	ribonucleoside triphosphate reductase	100.0	16.5	72.9
MGA_1189	LOCUS_11880	sequence4:106615..106935(-)	internal_stop_codon	106987..106989(-),106516..106518(-),106612..106614(-),106615..106617(-),106972..106974(-),106582..106584(-),106426..106428(-)		WP_011389031.1	ribonucleoside triphosphate reductase	100.0	12.9	56.6
MGA_1190	LOCUS_11890	sequence4:106987..107229(-)	internal_stop_codon	106987..106989(-),107380..107382(-),107458..107460(-),106972..106974(-),107410..107412(-),107296..107298(-)		WP_004192163.1	ribonucleoside triphosphate reductase	55.0	7.5	65.9
MGA_1191	LOCUS_11900	sequence4:107563..107739(-)	internal_stop_codon	107410..107412(-),107380..107382(-),107458..107460(-),107911..107913(-),107563..107565(-),107551..107553(-),107296..107298(-)		WP_011389031.1	ribonucleoside triphosphate reductase	100.0	8.6	50.0
MGA_1194	LOCUS_11930	sequence4:109688..110350(-)	internal_stop_codon	110372..110374(-)		WP_012869581.1	pyruvate kinase	99.5	38.3	25.2
MGA_1196	LOCUS_11950	sequence4:112119..112373(-)	internal_stop_codon	112413..112415(-),112104..112106(-),112119..112121(-)		WP_010979490.1	PINc/VapC family ATPase	95.2	15.7	36.2
MGA_1199	LOCUS_11980	sequence4:117661..117927(+)	internal_stop_codon	117658..117660(+),117622..117624(+),117934..117936(+),117466..117468(+),117535..117537(+),118018..118020(+),117925..117927(+)		WP_004804477.1	KilA-N domain-containing protein	97.7	32.2	59.3
MGA_1213	LOCUS_12120	sequence4:125786..126028(+)	internal_stop_codon	126101..126103(+),126026..126028(+),126065..126067(+),126035..126037(+)		WP_002679741.1	YifB family Mg chelatase-like AAA ATPase	77.5	11.0	53.2
MGA_1216	LOCUS_12150	sequence4:128106..128300(+)	internal_stop_codon	128298..128300(+),128490..128492(+),127989..127991(+)		WP_005783975.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	98.4	12.5	47.6
MGA_1218	LOCUS_12170	sequence4:128505..129479(+)	internal_stop_codon	128298..128300(+),128490..128492(+)		WP_011108817.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	100.0	62.9	42.8
MGA_1219	LOCUS_12180	sequence4:129917..130162(+)	internal_stop_codon	130160..130162(+),129884..129886(+)		WP_012775435.1	ABC-F family ATP-binding cassette domain-containing protein	67.9	8.7	52.7
MGA_1221	LOCUS_12200	sequence4:130823..131080(+)	internal_stop_codon	130760..130762(+),131078..131080(+),130673..130675(+),130601..130603(+)		WP_002286153.1	ABC-F family ATP-binding cassette domain-containing protein	83.5	13.5	47.9
MGA_1226	LOCUS_12250	sequence4:136036..136470(-)	internal_stop_codon	136609..136611(-),135811..135813(-),135889..135891(-),136543..136545(-),136036..136038(-),136471..136473(-)		WP_008765309.1	type I DNA topoisomerase	99.3	18.4	59.7
MGA_1227	LOCUS_12260	sequence4:136765..137184(-)	internal_stop_codon	136609..136611(-),137197..137199(-),137248..137250(-),136543..136545(-),137452..137454(-),136765..136767(-)		WP_011964077.1	type I DNA topoisomerase	98.6	16.1	57.7
MGA_1228	LOCUS_12270	sequence4:137248..137436(-)	internal_stop_codon	137197..137199(-),137452..137454(-),137248..137250(-)		WP_005791192.1	type I DNA topoisomerase	95.2	7.6	62.7
MGA_1229	LOCUS_12280	sequence4:137452..137745(-)	internal_stop_codon	137452..137454(-),137197..137199(-),137776..137778(-),137248..137250(-)		WP_011964077.1	type I DNA topoisomerase	96.9	11.2	76.6
MGA_1230	LOCUS_12290	sequence4:137776..138033(-)	internal_stop_codon	137776..137778(-)		WP_011964077.1	type I DNA topoisomerase	98.8	10.0	67.9
MGA_1255	LOCUS_12540	sequence5:10367..10795(+)	internal_stop_codon	10346..10348(+),10259..10261(+)		WP_010869953.1	S-methyl-5-thioribose-1-phosphate isomerase	85.9	38.0	41.5
MGA_1256	LOCUS_12550	sequence5:11034..11465(+)	internal_stop_codon	11463..11465(+)		WP_011339170.1	ribulose-bisphosphate carboxylase	87.4	28.3	40.0
MGA_1257	LOCUS_12560	sequence5:11484..11735(+)	internal_stop_codon	11745..11747(+),11733..11735(+),11925..11927(+),11463..11465(+)		WP_011339170.1	ribulose-bisphosphate carboxylase	100.0	17.9	42.2
MGA_1258	LOCUS_12570	sequence5:11787..11927(+)	internal_stop_codon	11733..11735(+),11925..11927(+),11745..11747(+)		WP_011339170.1	ribulose-bisphosphate carboxylase	95.7	9.6	59.1
MGA_1260	LOCUS_12590	sequence5:12797..13498(+)	internal_stop_codon	12794..12796(+),13496..13498(+)		WP_011085901.1	thymidine phosphorylase family protein	99.1	45.0	43.1
MGA_1262	LOCUS_12610	sequence5:14040..14291(+)	internal_stop_codon	14289..14291(+),14337..14339(+)		WP_003436250.1	pyruvate kinase	92.8	13.1	41.6
MGA_1263	LOCUS_12620	sequence5:14373..14768(+)	internal_stop_codon	14766..14768(+),14961..14963(+),14289..14291(+),14337..14339(+)		WP_008761922.1	pyruvate kinase	100.0	26.8	49.6
MGA_1264	LOCUS_12630	sequence5:14805..14963(+)	internal_stop_codon	14766..14768(+),14961..14963(+)		WP_012066892.1	pyruvate kinase	96.2	10.4	64.0
MGA_1278	LOCUS_12770	sequence5:24226..24360(+)	internal_stop_codon	24358..24360(+),24445..24447(+)		WP_001832283.1	50S ribosomal protein L7/L12	86.4	31.1	68.4
MGA_1279	LOCUS_12780	sequence5:24750..25367(+)	partial			WP_005904120.1	30S ribosomal protein S2	83.9	70.0	31.0
MGA_1281	LOCUS_12800	sequence5:26043..26273(+)	internal_stop_codon	26271..26273(+)		WP_010880428.1	translation elongation factor Ts	100.0	26.9	48.7
MGA_1282	LOCUS_12810	sequence5:26274..26801(+)	internal_stop_codon	26271..26273(+)		WP_011962622.1	translation elongation factor Ts	83.4	55.8	35.1
MGA_1285	LOCUS_12840	sequence5:28301..29083(+)	internal_stop_codon	29081..29083(+),28292..28294(+),29375..29377(+)		WP_000147553.1	DNA-directed RNA polymerase subunit beta	88.5	18.9	31.9
MGA_1286	LOCUS_12850	sequence5:29132..29377(+)	internal_stop_codon	29522..29524(+),29081..29083(+),29465..29467(+),29375..29377(+)		WP_004081508.1	DNA-directed RNA polymerase subunit beta	100.0	6.4	40.7
MGA_1287	LOCUS_12860	sequence5:29528..30118(+)	internal_stop_codon	30116..30118(+),29375..29377(+),29522..29524(+),29465..29467(+),30266..30268(+)		WP_010882731.1	DNA-directed RNA polymerase subunit beta	62.2	9.7	45.1
MGA_1288	LOCUS_12870	sequence5:30308..30550(+)	internal_stop_codon	30818..30820(+),30116..30118(+),30746..30748(+),30566..30568(+),30266..30268(+),30563..30565(+),30548..30550(+)		WP_011029792.1	DNA-directed RNA polymerase subunit beta	100.0	6.9	68.8
MGA_1289	LOCUS_12880	sequence5:30884..31462(+)	internal_stop_codon	30818..30820(+)		WP_164927192.1	DNA-directed RNA polymerase subunit beta	97.9	14.5	60.3
MGA_1291	LOCUS_12900	sequence5:32172..33497(+)	internal_stop_codon	31956..31958(+),33495..33497(+),31980..31982(+),32157..32159(+),32022..32024(+)		WP_007051319.1	DNA-directed RNA polymerase subunit beta'	99.5	33.7	40.9
MGA_1292	LOCUS_12910	sequence5:33525..33905(+)	internal_stop_codon	33903..33905(+),34140..34142(+),34095..34097(+),33495..33497(+),34011..34013(+)		WP_001256473.1	DNA-directed RNA polymerase subunit beta'	100.0	8.2	33.6
MGA_1295	LOCUS_12940	sequence5:35454..35663(+)	internal_stop_codon	35265..35267(+),35370..35372(+)		WP_013222587.1	DNA-directed RNA polymerase subunit beta'	95.7	5.1	51.5
MGA_1308	LOCUS_13070	sequence5:44837..45352(-)	internal_stop_codon	45503..45505(-),45440..45442(-),45617..45619(-)		WP_011037869.1	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase	89.5	33.5	42.5
MGA_1313	LOCUS_13120	sequence5:50049..51986(-)	partial			WP_012583645.1	Ig-like domain-containing protein	64.8	72.5	43.1
MGA_1319	LOCUS_13180	sequence5:57195..57794(+)	internal_stop_codon	57099..57101(+),57192..57194(+),56997..56999(+),56925..56927(+)		WP_011861409.1	DNA mismatch repair endonuclease MutL	93.0	28.2	33.5
MGA_1325	LOCUS_13240	sequence5:60088..60420(-)	internal_stop_codon	60472..60474(-),60088..60090(-)		WP_002657224.1	transcription termination factor NusA	96.4	22.6	48.6
MGA_1326	LOCUS_13250	sequence5:60472..61155(-)	internal_stop_codon	60472..60474(-)		WP_005903346.1	transcription termination factor NusA	83.7	53.2	25.4
MGA_1336	LOCUS_13350	sequence5:65647..65889(-)	internal_stop_codon	65959..65961(-),65941..65943(-)		WP_011707016.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	91.2	15.3	38.4
MGA_1339	LOCUS_13380	sequence5:67169..67552(-)	internal_stop_codon	67652..67654(-),67805..67807(-)		WP_009994372.1	excinuclease ABC subunit UvrB	44.9	8.1	54.4
MGA_1340	LOCUS_13390	sequence5:67805..68107(-)	internal_stop_codon	67652..67654(-),68114..68116(-),67805..67807(-)		WP_003546586.1	excinuclease ABC subunit UvrB	99.0	14.6	37.6
MGA_1341	LOCUS_13400	sequence5:68114..68560(-)	internal_stop_codon	68588..68590(-),68114..68116(-)		WP_002678935.1	excinuclease ABC subunit UvrB	100.0	22.4	56.1
MGA_1348	LOCUS_13470	sequence5:72501..72713(+)	partial			WP_011173648.1	DUF192 domain-containing protein	98.6	45.7	42.0
MGA_1362	LOCUS_13610	sequence5:82896..83129(+)	internal_stop_codon	83148..83150(+),82788..82790(+),83259..83261(+),83352..83354(+),83361..83363(+),82773..82775(+),83127..83129(+),83346..83348(+),83403..83405(+),83202..83204(+)		WP_012584040.1	cysteine--tRNA ligase	100.0	16.6	50.6
MGA_1363	LOCUS_13620	sequence5:83517..83777(+)	internal_stop_codon	83775..83777(+),83259..83261(+),83352..83354(+),83361..83363(+),83823..83825(+),83346..83348(+),83403..83405(+),83484..83486(+)		WP_002666765.1	cysteine--tRNA ligase	87.2	15.2	46.7
MGA_1365	LOCUS_13640	sequence5:85136..85339(+)	internal_stop_codon	85421..85423(+),85094..85096(+),85337..85339(+),85349..85351(+),85052..85054(+),84944..84946(+),84917..84919(+)		WP_226986828.1	MFS transporter	97.0	15.9	50.8
MGA_1369	LOCUS_13680	sequence5:87133..87318(-)	internal_stop_codon	87079..87081(-),87133..87135(-),87484..87486(-),87397..87399(-),87358..87360(-)		WP_010880800.1	methionine--tRNA ligase	98.4	12.1	51.7
MGA_1380	LOCUS_13790	sequence5:95262..95675(+)	internal_stop_codon	95673..95675(+),95709..95711(+)		WP_010868842.1	tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3	94.2	22.1	36.0
MGA_1381	LOCUS_13800	sequence5:95724..96413(+)	internal_stop_codon	96411..96413(+),95673..95675(+),95709..95711(+)		WP_010879889.1	tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3	97.8	38.9	37.9
MGA_1385	LOCUS_13840	sequence5:99018..99458(-)	internal_stop_codon	99717..99719(-),99486..99488(-),99630..99632(-),99666..99668(-),99612..99614(-)		WP_004080806.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	99.3	23.0	58.9
MGA_1387	LOCUS_13860	sequence5:99993..100166(-)	internal_stop_codon	99717..99719(-),99903..99905(-),99915..99917(-),99993..99995(-),100254..100256(-),99894..99896(-)		WP_004080806.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	96.5	8.6	43.6
MGA_1388	LOCUS_13870	sequence5:100254..100535(-)	internal_stop_codon	100572..100574(-),100254..100256(-),100608..100610(-),100824..100826(-)		WP_028842096.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	12.5	41.9
MGA_1389	LOCUS_13880	sequence5:100608..100805(-)	internal_stop_codon	100836..100838(-),100572..100574(-),100824..100826(-),100863..100865(-),100608..100610(-)		WP_003549374.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	9.9	66.2
MGA_1390	LOCUS_13890	sequence5:101209..101379(-)	internal_stop_codon	101563..101565(-),101590..101592(-),101479..101481(-)		WP_011861220.1	RNA polymerase sigma factor RpoD	92.9	13.6	58.5
MGA_1391	LOCUS_13900	sequence5:101590..101820(-)	internal_stop_codon	101563..101565(-),101590..101592(-),101479..101481(-),101827..101829(-)		WP_004081730.1	RNA polymerase sigma factor RpoD	98.7	18.4	60.0
MGA_1392	LOCUS_13910	sequence5:101827..102036(-)	internal_stop_codon	101590..101592(-),101827..101829(-)		WP_012583671.1	sigma-70 family RNA polymerase sigma factor	85.5	14.3	57.6
MGA_1399	LOCUS_13980	sequence5:108279..108431(+)	internal_stop_codon	108222..108224(+),108171..108173(+),108036..108038(+),108429..108431(+),108141..108143(+),108252..108254(+)		WP_005084973.1	translation elongation factor 4	100.0	8.1	64.0
MGA_1400	LOCUS_13990	sequence5:108447..108755(+)	internal_stop_codon	108222..108224(+),109029..109031(+),108171..108173(+),108912..108914(+),108252..108254(+),108429..108431(+),108753..108755(+)		WP_009994121.1	translation elongation factor 4	61.8	10.1	46.0
MGA_1401	LOCUS_14000	sequence5:109548..109814(+)	internal_stop_codon	109536..109538(+),109371..109373(+),109812..109814(+)		WP_003416556.1	translation elongation factor 4	100.0	14.6	61.4
MGA_1402	LOCUS_14010	sequence5:110252..110821(+)	internal_stop_codon	110819..110821(+),110936..110938(+)		WP_010932834.1	A/G-specific adenine glycosylase	97.4	65.6	47.3
MGA_1411	LOCUS_14100	sequence5:116403..116693(+)	internal_stop_codon	116691..116693(+)		WP_011728566.1	dUTP diphosphatase	89.6	57.1	48.9
MGA_1414	LOCUS_14130	sequence5:117842..118198(+)	internal_stop_codon	117749..117751(+),117764..117766(+)		WP_005902123.1	crossover junction endodeoxyribonuclease RuvC	89.8	55.3	40.6
MGA_1416	LOCUS_14150	sequence6:337..582(+)	internal_stop_codon	754..756(+),580..582(+),718..720(+),871..873(+),724..726(+)		WP_012583776.1	phosphopyruvate hydratase	98.8	18.9	68.8
MGA_1423	LOCUS_14220	sequence6:5360..5737(+)	partial			WP_048065099.1	cupredoxin family copper-binding protein	71.2	60.8	40.4
MGA_1426	LOCUS_14250	sequence6:6798..7010(+)	internal_stop_codon	7122..7124(+),7026..7028(+),7008..7010(+),6795..6797(+)		WP_011391495.1	redox-regulated ATPase YchF	100.0	19.1	67.1
MGA_1427	LOCUS_14260	sequence6:7137..7814(+)	internal_stop_codon	7122..7124(+),7026..7028(+),7008..7010(+),7812..7814(+)		WP_011017102.1	redox-regulated ATPase YchF	99.6	59.9	37.3
MGA_1429	LOCUS_14280	sequence6:9301..10194(+)	partial			WP_000116737.1	RNA polymerase sigma factor RpoS	20.2	17.9	43.3
MGA_1432	LOCUS_14310	sequence6:11352..11552(+)	internal_stop_codon	11265..11267(+),11550..11552(+),11661..11663(+)		WP_010887995.1	excinuclease ABC subunit UvrC	93.9	10.0	50.0
MGA_1462	LOCUS_14610	sequence6:28388..28726(+)	internal_stop_codon	28724..28726(+),28250..28252(+),28247..28249(+),28337..28339(+)		WP_012583884.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	98.2	40.4	44.5
MGA_1470	LOCUS_14690	sequence6:35190..35681(-)	internal_stop_codon	35181..35183(-),35190..35192(-),35073..35075(-),35151..35153(-),34935..34937(-),35082..35084(-)		WP_003385808.1	ribonuclease J	98.8	27.9	43.5
MGA_1515	LOCUS_15140	sequence6:65165..65446(-)	internal_stop_codon	65453..65455(-),65165..65167(-),65120..65122(-)		WP_000616784.1	preprotein translocase subunit SecY	98.9	21.9	43.6
MGA_1520	LOCUS_15190	sequence6:67319..67522(-)	internal_stop_codon	67601..67603(-)		WP_002356218.1	50S ribosomal protein L18	97.0	57.6	48.5
MGA_1521	LOCUS_15200	sequence6:67800..68003(-)	internal_stop_codon	68148..68150(-),67800..67802(-),68022..68024(-),68049..68051(-)		WP_003435668.1	50S ribosomal protein L6	98.5	34.4	47.0
MGA_1522	LOCUS_15210	sequence6:68148..68288(-)	internal_stop_codon	68148..68150(-),68022..68024(-),68049..68051(-)		WP_000086633.1	50S ribosomal protein L6	100.0	25.8	56.5
MGA_1523	LOCUS_15220	sequence6:68444..68782(-)	internal_stop_codon	68444..68446(-)		WP_012583359.1	30S ribosomal protein S8	97.3	81.7	39.1
MGA_1524	LOCUS_15230	sequence6:69276..69656(-)	internal_stop_codon	69276..69278(-),69261..69263(-)		WP_001080824.1	50S ribosomal protein L5	100.0	69.8	44.1
MGA_1527	LOCUS_15260	sequence6:71179..71370(-)	internal_stop_codon	71179..71181(-),71389..71391(-)		WP_002656214.1	50S ribosomal protein L16	98.4	44.9	50.0
MGA_1531	LOCUS_15300	sequence6:72711..72926(-)	partial			WP_012545511.1	30S ribosomal protein S19	95.8	71.6	64.7
MGA_1532	LOCUS_15310	sequence6:73504..73776(-)	internal_stop_codon	73486..73488(-),73258..73260(-),73249..73251(-),73792..73794(-),73504..73506(-),73429..73431(-),73366..73368(-)		WP_010933839.1	50S ribosomal protein L2	100.0	31.9	66.7
MGA_1536	LOCUS_15350	sequence6:74719..74940(-)	internal_stop_codon	74680..74682(-),74719..74721(-),74674..74676(-),74491..74493(-)		WP_012258232.1	50S ribosomal protein L4	91.8	29.7	41.8
MGA_1538	LOCUS_15370	sequence6:75197..75574(-)	internal_stop_codon	75197..75199(-),75161..75163(-)		WP_002557069.1	50S ribosomal protein L3	96.0	61.7	33.9
MGA_1539	LOCUS_15380	sequence6:75725..75979(-)	internal_stop_codon	75725..75727(-),75680..75682(-)		WP_003638059.1	30S ribosomal protein S10	89.3	73.5	50.7
MGA_1550	LOCUS_15490	sequence6:83488..83856(+)	internal_stop_codon	83482..83484(+)		WP_011108811.1	ribonuclease H family protein	100.0	54.5	36.6
MGA_1574	LOCUS_15730	sequence6:98555..99085(+)	internal_stop_codon	99083..99085(+),98510..98512(+),98471..98473(+)		WP_011015951.1	DEAD/DEAH box helicase	100.0	33.3	51.7
MGA_1575	LOCUS_15740	sequence6:99152..99793(+)	internal_stop_codon	99083..99085(+),99791..99793(+),99800..99802(+),99842..99844(+)		WP_011015951.1	DEAD/DEAH box helicase	94.4	38.1	53.7
MGA_1577	LOCUS_15760	sequence6:101301..101504(+)	internal_stop_codon	101697..101699(+),101502..101504(+)		WP_001829412.1	DNA polymerase III subunit gamma/tau	98.5	11.4	51.5
MGA_1578	LOCUS_15770	sequence6:101556..101699(+)	internal_stop_codon	101931..101933(+),101697..101699(+),101502..101504(+)		WP_011141608.1	DNA polymerase III subunit gamma/tau	97.9	7.1	60.9
MGA_1579	LOCUS_15780	sequence6:101715..101933(+)	internal_stop_codon	101931..101933(+),101697..101699(+),101502..101504(+)		WP_000283801.1	DNA polymerase III subunit gamma/tau	100.0	13.1	50.0
MGA_1583	LOCUS_15820	sequence6:104235..104441(-)	internal_stop_codon	104235..104237(-),104157..104159(-),104478..104480(-),104043..104045(-),104133..104135(-),104226..104228(-),104130..104132(-),104055..104057(-)		WP_010889778.1	aminoacyl-histidine dipeptidase	98.5	14.9	60.6
MGA_1587	LOCUS_15860	sequence7:1316..1636(-)	internal_stop_codon	1316..1318(-),1031..1033(-),1088..1090(-),1838..1840(-),1661..1663(-),1226..1228(-),1775..1777(-),1718..1720(-)		WP_010888712.1	threonine--tRNA ligase	96.2	15.6	54.9
MGA_1605	LOCUS_16040	sequence7:19747..20022(-)	internal_stop_codon	19747..19749(-),19744..19746(-)		WP_012870231.1	four helix bundle protein	74.7	57.3	40.8
MGA_1613	LOCUS_16120	sequence7:26221..26469(-)	internal_stop_codon	26221..26223(-),26650..26652(-),26497..26499(-),26179..26181(-),26485..26487(-)		WP_011016589.1	protein translocase subunit SecF	86.6	22.1	51.4
MGA_1616	LOCUS_16150	sequence7:27503..27751(-)	internal_stop_codon	27503..27505(-),27485..27487(-)		WP_011166663.1	ribonuclease III	91.5	31.9	41.3
MGA_1621	LOCUS_16200	sequence7:30132..30731(+)	internal_stop_codon	30114..30116(+)		WP_005417568.1	type IV pilus twitching motility protein PilT	97.5	55.9	46.4
MGA_1627	LOCUS_16260	sequence7:35487..35672(+)	internal_stop_codon	35421..35423(+),35709..35711(+),35670..35672(+),35730..35732(+),35463..35465(+)		WP_011105740.1	hypothetical protein	100.0	24.8	55.7
MGA_1631	LOCUS_16300	sequence7:40636..41244(-)	internal_stop_codon	41248..41250(-),41272..41274(-)		WP_004081386.1	GTPase HflX	92.6	44.8	43.1
MGA_1632	LOCUS_16310	sequence7:41272..41727(-)	internal_stop_codon	41248..41250(-),41272..41274(-)		WP_011144128.1	GTPase HflX	99.3	24.7	36.7
MGA_1633	LOCUS_16320	sequence7:42010..42591(+)	internal_stop_codon	42601..42603(+),42589..42591(+)		WP_012583164.1	ribonuclease Y	87.0	39.0	30.5
MGA_1634	LOCUS_16330	sequence7:42616..43035(+)	internal_stop_codon	43033..43035(+),42601..42603(+),42589..42591(+),43234..43236(+)		WP_012583164.1	ribonuclease Y	97.8	27.9	53.7
MGA_1635	LOCUS_16340	sequence7:43075..43236(+)	internal_stop_codon	43033..43035(+),43234..43236(+)		WP_011166606.1	ribonuclease Y	94.3	9.8	58.0
MGA_1636	LOCUS_16350	sequence7:43288..43461(+)	internal_stop_codon	43033..43035(+),43234..43236(+)		WP_002263046.1	ribonuclease Y	100.0	10.7	47.4
MGA_1647	LOCUS_16460	sequence8:4362..4589(-)	internal_stop_codon	4362..4364(-),4335..4337(-)		WP_011964123.1	peptide chain release factor N(5)-glutamine methyltransferase	50.7	13.3	60.5
MGA_1653	LOCUS_16510	sequence8:17307..17459(-)	internal_stop_codon	17628..17630(-),17643..17645(-),17490..17492(-),17307..17309(-)		WP_109982143.1	penicillin-binding protein 1A	98.0	6.0	63.3
MGA_1656	LOCUS_16540	sequence8:19748..19954(+)	internal_stop_codon	19952..19954(+),19643..19645(+)		WP_010944066.1	peptide deformylase	100.0	40.2	43.5
MGA_1661	LOCUS_16590	sequence8:23424..24092(+)	internal_stop_codon	24090..24092(+)		WP_011016201.1	ribosome biogenesis GTPase Der	99.1	46.8	33.0
MGA_1662	LOCUS_16600	sequence8:24138..24641(+)	internal_stop_codon	24639..24641(+),24090..24092(+)		WP_011986848.1	ribosome biogenesis GTPase Der	95.8	36.9	32.1