{
    "type": "genome",
    "identifier": "GCA_026398035.1",
    "organism": "Verrucomicrobiota bacterium",
    "title": "Verrucomicrobiota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Jill Banfield's Lab at Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026398035.1",
        "bioproject": "PRJNA852163",
        "biosample": "SAMN30026483",
        "wgs_master": "JAPLTS000000000.1",
        "refseq_category": "na",
        "taxid": "2026799",
        "species_taxid": "2026799",
        "organism_name": "Verrucomicrobiota bacterium",
        "infraspecific_name": "",
        "isolate": "LacPavin_0419_WC70S_MAG_63_7",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/24",
        "asm_name": "ASM2639803v1",
        "submitter": "Jill Banfield's Lab at Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/398/035/GCA_026398035.1_ASM2639803v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-24",
    "dateModified": "2022-11-24",
    "datePublished": "2022-11-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Verrucomicrobiota bacterium"
        ],
        "sample_taxid": [
            "2026799"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France: Besse-et-Saint-Anastaise, Lac Pavin"
        ],
        "sample_host_location_id": [],
        "data_size": "1.047 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 69.9,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3697282",
        "Number of Sequences": "829",
        "Longest Sequences (bp)": "28725",
        "N50 (bp)": "5659",
        "Gap Ratio (%)": "0.009358",
        "GCcontent (%)": "63.2",
        "Number of CDSs": "2443",
        "Average Protein Length": "319.3",
        "Coding Ratio (%)": "63.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Nibricoccus aquaticus",
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                "accession": "GCA_002310495.1",
                "taxid": 2576891,
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 159,
                "total_fragments": 772,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rariglobus hedericola",
                "strain": "strain=53C-WASEF",
                "accession": "GCA_007559335.1",
                "taxid": 2597822,
                "species_taxid": 2597822,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0445,
                "matched_fragments": 130,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geminisphaera colitermitum",
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                "accession": "GCA_000171235.2",
                "taxid": 1148786,
                "species_taxid": 1148786,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4975,
                "matched_fragments": 86,
                "total_fragments": 772,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ereboglobus luteus",
                "strain": "strain=Ho45",
                "accession": "GCA_003096195.1",
                "taxid": 1796921,
                "species_taxid": 1796921,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2219,
                "matched_fragments": 82,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Opitutus terrae",
                "strain": "strain=PB90-1",
                "accession": "GCA_000019965.1",
                "taxid": 107709,
                "species_taxid": 107709,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1512,
                "matched_fragments": 108,
                "total_fragments": 772,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptomyces paromomycinus",
                "strain": "strain=NBRC 15454",
                "accession": "GCA_003865155.1",
                "taxid": 92743,
                "species_taxid": 92743,
                "relation_to_type": "type",
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                "ani": 74.6372,
                "matched_fragments": 52,
                "total_fragments": 772,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptomyces rimosus subsp. rimosus",
                "strain": "strain=R7",
                "accession": "GCA_022760195.1",
                "taxid": 132474,
                "species_taxid": 1927,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.5956,
                "matched_fragments": 59,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptomyces monomycini",
                "strain": "strain=NRRL B-24309",
                "accession": "GCA_022271435.1",
                "taxid": 371720,
                "species_taxid": 371720,
                "relation_to_type": "type",
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                "ani": 74.5836,
                "matched_fragments": 50,
                "total_fragments": 772,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "status": "conclusive"
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
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            {
                "accession": "GCA_014376585.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Opitutaceae;g__Tous-C4FEB",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903938935.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Opitutaceae;g__Tous-C4FEB",
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                "status": "-"
            },
            {
                "accession": "GCA_009919985.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_003402695.1",
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                "status": "-"
            },
            {
                "accession": "GCA_903881475.1",
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            },
            {
                "accession": "GCA_009695065.1",
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        ]
    },
    "_bac2feature": {
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        "genome_size": null,
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    },
    "_gtdb_taxon": [
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    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
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    ],
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}