{
    "type": "genome",
    "identifier": "GCA_026400985.1",
    "organism": "Planctomycetia bacterium",
    "title": "Planctomycetia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Jill Banfield's Lab at Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026400985.1",
        "bioproject": "PRJNA852163",
        "biosample": "SAMN30026327",
        "wgs_master": "JAPLNS000000000.1",
        "refseq_category": "na",
        "taxid": "2052181",
        "species_taxid": "2052181",
        "organism_name": "Planctomycetia bacterium",
        "infraspecific_name": "",
        "isolate": "LacPavin_0419_WC53_MAG_57_18",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/24",
        "asm_name": "ASM2640098v1",
        "submitter": "Jill Banfield's Lab at Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/400/985/GCA_026400985.1_ASM2640098v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-24",
    "dateModified": "2022-11-24",
    "datePublished": "2022-11-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Planctomycetia bacterium"
        ],
        "sample_taxid": [
            "2052181"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France: Besse-et-Saint-Anastaise, Lac Pavin"
        ],
        "sample_host_location_id": [],
        "data_size": "0.827 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2884845",
        "Number of Sequences": "149",
        "Longest Sequences (bp)": "94199",
        "N50 (bp)": "34770",
        "Gap Ratio (%)": "0.001387",
        "GCcontent (%)": "57.3",
        "Number of CDSs": "2186",
        "Average Protein Length": "367.8",
        "Coding Ratio (%)": "83.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002737405.1",
                "gtdb_species": "s__BAIKAL-G1-2R sp002737405",
                "ani": 97.7496,
                "matched_fragments": 806,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__BAIKAL-G1-2R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.99",
                "min_intra_species_ani": "97.98",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_903877395.1",
                "gtdb_species": "s__BAIKAL-G1-2R sp903877395",
                "ani": 78.6328,
                "matched_fragments": 153,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__BAIKAL-G1-2R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003670915.1",
                "gtdb_species": "s__BAIKAL-G1-2R sp003670915",
                "ani": 78.5953,
                "matched_fragments": 106,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__BAIKAL-G1-2R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003670865.1",
                "gtdb_species": "s__BAIKAL-G1-2R sp003670865",
                "ani": 76.9854,
                "matched_fragments": 134,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__BAIKAL-G1-2R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903885565.1",
                "gtdb_species": "s__CAISJI01 sp903885565",
                "ani": 76.6653,
                "matched_fragments": 125,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__CAISJI01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009924545.1",
                "gtdb_species": "s__F1-20-MAGs016 sp009924545",
                "ani": 76.5902,
                "matched_fragments": 65,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__F1-20-MAGs016",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018970605.1",
                "gtdb_species": "s__QWPN01 sp018970605",
                "ani": 76.5421,
                "matched_fragments": 67,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__QWPN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009926295.1",
                "gtdb_species": "s__RGVT01 sp009926295",
                "ani": 76.3271,
                "matched_fragments": 95,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__RGVT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003670825.1",
                "gtdb_species": "s__QWPN01 sp003670825",
                "ani": 76.1856,
                "matched_fragments": 64,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__QWPN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005791575.1",
                "gtdb_species": "s__F1-20-MAGs016 sp005791575",
                "ani": 75.9985,
                "matched_fragments": 60,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__F1-20-MAGs016",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016872925.1",
                "gtdb_species": "s__QWPN01 sp016872925",
                "ani": 75.8801,
                "matched_fragments": 81,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__QWPN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005789975.1",
                "gtdb_species": "s__QWPN01 sp005789975",
                "ani": 75.8667,
                "matched_fragments": 74,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__QWPN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.49",
                "min_intra_species_ani": "99.44",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_010027105.1",
                "gtdb_species": "s__RGVT01 sp010027105",
                "ani": 75.7225,
                "matched_fragments": 66,
                "total_fragments": 885,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__UBA1268;g__RGVT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Planctomycetia",
        "o__Pirellulales",
        "f__UBA1268",
        "g__BAIKAL-G1-2R",
        "s__BAIKAL-G1-2R sp002737405"
    ],
    "_genome_taxon": [
        "Planctomycetia",
        "bacterium",
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Planctomycetia",
        "o__Pirellulales",
        "f__UBA1268",
        "g__BAIKAL-G1-2R",
        "s__BAIKAL-G1-2R sp002737405",
        "Bacteria",
        "Planctomycetota",
        "Planctomycetia",
        "Pirellulales",
        "UBA1268",
        "BAIKAL-G1-2R",
        "BAIKAL-G1-2R",
        "sp002737405"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}