{
    "type": "genome",
    "identifier": "GCA_026415075.1",
    "organism": "Aquificaceae bacterium",
    "title": "Aquificaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Universiti Teknologi Malaysia - Malaysia",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026415075.1",
        "bioproject": "PRJEB4990",
        "biosample": "SAMN30305204",
        "wgs_master": "JAOAHT000000000.1",
        "refseq_category": "na",
        "taxid": "2053503",
        "species_taxid": "2053503",
        "organism_name": "Aquificaceae bacterium",
        "infraspecific_name": "",
        "isolate": "SKW70",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/27",
        "asm_name": "ASM2641507v1",
        "submitter": "Universiti Teknologi Malaysia - Malaysia",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/415/075/GCA_026415075.1_ASM2641507v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-27",
    "dateModified": "2022-11-27",
    "datePublished": "2022-11-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Aquificaceae bacterium"
        ],
        "sample_taxid": [
            "2053503"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Malaysia: Sungkai, Perak"
        ],
        "sample_host_location_id": [],
        "data_size": "0.425 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.2,
        "contamination": 0.46,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1495876",
        "Number of Sequences": "212",
        "Longest Sequences (bp)": "22820",
        "N50 (bp)": "8685",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "44.1",
        "Number of CDSs": "1311",
        "Average Protein Length": "283.9",
        "Coding Ratio (%)": "74.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "28",
        "Number of CRISPRs": "9"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Hydrogenobacter thermophilus",
                "strain": "strain=TK-6",
                "accession": "GCA_000010785.1",
                "taxid": 940,
                "species_taxid": 940,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9765,
                "matched_fragments": 50,
                "total_fragments": 394,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hydrogenobacter thermophilus",
                "strain": "strain=TK-6",
                "accession": "GCA_000164905.1",
                "taxid": 940,
                "species_taxid": 940,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9489,
                "matched_fragments": 51,
                "total_fragments": 394,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.2,
            "contamination": 0.46,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018771605.1",
                "gtdb_species": "s__UBA11096 sp003534055",
                "ani": 76.4052,
                "matched_fragments": 89,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Aquificota;c__Aquificae;o__Aquificales;f__Aquificaceae;g__UBA11096",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.57",
                "min_intra_species_ani": "98.52",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_000010785.1",
                "gtdb_species": "s__Hydrogenobacter thermophilus",
                "ani": 75.9765,
                "matched_fragments": 50,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Aquificota;c__Aquificae;o__Aquificales;f__Aquificaceae;g__Hydrogenobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.53",
                "min_intra_species_ani": "96.28",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.268,
        "cell_length": 0.295,
        "doubling_h": 0.044,
        "growth_tmp": 75.83,
        "optimum_tmp": 73.916,
        "optimum_ph": 6.716,
        "genome_size": 1548870.869,
        "gc_content": 46.05,
        "coding_genes": 1592.166,
        "rRNA16S_genes": 2.666,
        "tRNA_genes": 43.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.142,
        "aerobic_respiration": 0.857,
        "mesophilic_range_tmp": 0.0,
        "thermophilic_range_tmp": 1.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Aquificota",
        "c__Aquificae",
        "o__Aquificales",
        "f__Aquificaceae",
        "g__UBA11096",
        "s__UBA11096 sp025057245"
    ],
    "_genome_taxon": [
        "Aquificaceae",
        "bacterium",
        "d__Bacteria",
        "p__Aquificota",
        "c__Aquificae",
        "o__Aquificales",
        "f__Aquificaceae",
        "g__UBA11096",
        "s__UBA11096 sp025057245",
        "Bacteria",
        "Aquificota",
        "Aquificae",
        "Aquificales",
        "Aquificaceae",
        "UBA11096",
        "UBA11096",
        "sp025057245"
    ],
    "_meo": [
        {
            "id": "MEO_0000029",
            "label": "hot spring"
        },
        {
            "id": "MEO_0000730",
            "label": "alkaline hot spring"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}