{ "type": "genome", "identifier": "GCA_026415375.1", "organism": "Anoxybacillus gonensis", "title": "Anoxybacillus gonensis", "description": "derived from metagenome; incomplete metagenome", "data type": "Genome sequencing and assembly", "organization": "Universiti Teknologi Malaysia - Malaysia", "publication": [ {} ], "properties": { "assembly_accession": "GCA_026415375.1", "bioproject": "PRJEB4990", "biosample": "SAMN30305191", "wgs_master": "JAOAHG000000000.1", "refseq_category": "na", "taxid": "198467", "species_taxid": "198467", "organism_name": "Anoxybacillus gonensis", "infraspecific_name": "", "isolate": "SKW54", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/11/27", "asm_name": "ASM2641537v1", "submitter": "Universiti Teknologi Malaysia - Malaysia", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/415/375/GCA_026415375.1_ASM2641537v1", "excluded_from_refseq": "derived from metagenome; incomplete metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-11-27", "dateModified": "2022-11-27", "datePublished": "2022-11-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Anoxybacillus gonensis" ], "sample_taxid": [ "198467" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Malaysia: Sungkai, Perak" ], "sample_host_location_id": [], "data_size": "0.714 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 56.25, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2506715", "Number of Sequences": "384", "Longest Sequences (bp)": "36704", "N50 (bp)": "8769", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "41.4", "Number of CDSs": "2412", "Average Protein Length": "271.3", "Coding Ratio (%)": "78.3", "Number of rRNAs": "1", "Number of tRNAs": "15", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Anoxybacillus gonensis", "strain": "strain=G2", "accession": "GCA_000770375.1", "taxid": 198467, "species_taxid": 198467, "relation_to_type": "suspected-type", "validated": true, "ani": 98.4815, "matched_fragments": 546, "total_fragments": 631, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Anoxybacillus gonensis", "strain": "strain=G2", "accession": "GCA_001187595.1", "taxid": 198467, "species_taxid": 198467, "relation_to_type": "suspected-type", "validated": true, "ani": 98.3536, "matched_fragments": 558, "total_fragments": 631, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Anoxybacillus kamchatkensis", "strain": "strain=DSM 14988", "accession": "GCA_013761015.1", "taxid": 196180, "species_taxid": 196180, "relation_to_type": "type", "validated": true, "ani": 93.7064, "matched_fragments": 493, "total_fragments": 631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anoxybacillus ayderensis", "strain": "strain=AB04", "accession": "GCA_000833605.1", "taxid": 265546, "species_taxid": 265546, "relation_to_type": "type", "validated": true, "ani": 93.6734, "matched_fragments": 513, "total_fragments": 631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anoxybacillus thermarum", "strain": "strain=AF/04", "accession": "GCA_000836725.1", "taxid": 404937, "species_taxid": 404937, "relation_to_type": "type", "validated": true, "ani": 92.8405, "matched_fragments": 485, "total_fragments": 631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anoxybacillus kestanbolensis", "strain": "strain=NCIMB 13971", "accession": "GCA_023653015.1", "taxid": 227476, "species_taxid": 227476, "relation_to_type": "type", "validated": true, "ani": 88.1032, "matched_fragments": 494, "total_fragments": 631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anoxybacillus mongoliensis", "strain": "strain=DSM 19169", "accession": "GCA_014201515.1", "taxid": 452565, "species_taxid": 452565, "relation_to_type": "type", "validated": true, "ani": 87.361, "matched_fragments": 511, "total_fragments": 631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anoxybacillus karvacharensis", "strain": "strain=K1", "accession": "GCA_001996285.1", "taxid": 1919277, "species_taxid": 1919277, "relation_to_type": "type", "validated": true, "ani": 87.2833, "matched_fragments": 486, "total_fragments": 631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anoxybacillus suryakundensis", "strain": "strain=DSM 27374", "accession": "GCA_001517225.1", "taxid": 1325335, "species_taxid": 1325335, "relation_to_type": "type", "validated": true, "ani": 86.6906, "matched_fragments": 479, "total_fragments": 631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anoxybacillus tengchongensis", "strain": "strain=DSM 23211", "accession": "GCA_014201585.1", "taxid": 576944, "species_taxid": 576944, "relation_to_type": "type", "validated": true, "ani": 86.678, "matched_fragments": 501, "total_fragments": 631, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 56.25, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001187595.1", "gtdb_species": "s__Anoxybacillus gonensis", "ani": 98.3536, "matched_fragments": 558, "total_fragments": 631, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Anoxybacillaceae;g__Anoxybacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.51", "min_intra_species_ani": "96.49", 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"N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002742685.1", "gtdb_species": "s__Anoxybacillus flavithermus_E", "ani": 89.9115, "matched_fragments": 497, "total_fragments": 631, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Anoxybacillaceae;g__Anoxybacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.92", "min_intra_species_ani": "99.92", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002243705.1", "gtdb_species": "s__Anoxybacillus flavithermus", "ani": 87.5236, "matched_fragments": 488, "total_fragments": 631, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Anoxybacillaceae;g__Anoxybacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.37", "min_intra_species_ani": "95.30", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.86", "num_clustered_genomes": 4, "status": "-" }, { 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"Bacilli", "Bacillales", "Anoxybacillaceae", "Anoxybacillus", "Anoxybacillus", "gonensis" ], "_meo": [ { "id": "MEO_0000029", "label": "hot spring" }, { "id": "MEO_0000730", "label": "alkaline hot spring" } ], "quality": 2, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f" }