{ "type": "genome", "identifier": "GCA_026417255.1", "organism": "Chloroflexus sp.", "title": "Chloroflexus sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Universiti Teknologi Malaysia - Malaysia", "publication": [ {} ], "properties": { "assembly_accession": "GCA_026417255.1", "bioproject": "PRJEB4990", "biosample": "SAMN30305096", "wgs_master": "JAOADP000000000.1", "refseq_category": "na", "taxid": "1904827", "species_taxid": "1904827", "organism_name": "Chloroflexus sp.", "infraspecific_name": "", "isolate": "SKW237", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/11/27", "asm_name": "ASM2641725v1", "submitter": "Universiti Teknologi Malaysia - Malaysia", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/417/255/GCA_026417255.1_ASM2641725v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-11-27", "dateModified": "2022-11-27", "datePublished": "2022-11-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Chloroflexus sp." ], "sample_taxid": [ "1904827" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Malaysia: Sungkai, Perak" ], "sample_host_location_id": [], "data_size": "0.978 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 85.42, "contamination": 0.38, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3454822", "Number of Sequences": "469", "Longest Sequences (bp)": "71388", "N50 (bp)": "14669", "Gap Ratio (%)": "0.009812", "GCcontent (%)": "59.2", "Number of CDSs": "2572", "Average Protein Length": "343.5", "Coding Ratio (%)": "76.7", "Number of rRNAs": "0", "Number of tRNAs": "31", "Number of CRISPRs": "121" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Chloroflexus islandicus", "strain": "strain=isl-2", "accession": "GCA_001650695.1", "taxid": 1707952, "species_taxid": 1707952, "relation_to_type": "type", "validated": true, "ani": 83.551, "matched_fragments": 854, "total_fragments": 967, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chloroflexus aggregans", "strain": "strain=DSM 9485", "accession": "GCA_000021945.1", "taxid": 152260, "species_taxid": 152260, "relation_to_type": "type", "validated": true, "ani": 78.8607, "matched_fragments": 503, "total_fragments": 967, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chloroflexus aurantiacus", "strain": "strain=J-10-fl", "accession": "GCA_000018865.1", "taxid": 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sp025057175", "Bacteria", "Chloroflexota", "Chloroflexia", "Chloroflexales", "Chloroflexaceae", "Chloroflexus", "Chloroflexus", "sp025057175" ], "_meo": [ { "id": "MEO_0000029", "label": "hot spring" }, { "id": "MEO_0000730", "label": "alkaline hot spring" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }