{
    "type": "genome",
    "identifier": "GCA_026417475.1",
    "organism": "Candidatus Bipolaricaulota bacterium",
    "title": "Candidatus Bipolaricaulota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Universiti Teknologi Malaysia - Malaysia",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026417475.1",
        "bioproject": "PRJEB4990",
        "biosample": "SAMN30305085",
        "wgs_master": "JAOADE000000000.1",
        "refseq_category": "na",
        "taxid": "2306012",
        "species_taxid": "2306012",
        "organism_name": "Candidatus Bipolaricaulota bacterium",
        "infraspecific_name": "",
        "isolate": "SKW225",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/27",
        "asm_name": "ASM2641747v1",
        "submitter": "Universiti Teknologi Malaysia - Malaysia",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/417/475/GCA_026417475.1_ASM2641747v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-27",
    "dateModified": "2022-11-27",
    "datePublished": "2022-11-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Bipolaricaulota bacterium"
        ],
        "sample_taxid": [
            "2306012"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Malaysia: Sungkai, Perak"
        ],
        "sample_host_location_id": [],
        "data_size": "0.346 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1270931",
        "Number of Sequences": "76",
        "Longest Sequences (bp)": "179039",
        "N50 (bp)": "60364",
        "Gap Ratio (%)": "0.037059",
        "GCcontent (%)": "70.0",
        "Number of CDSs": "1183",
        "Average Protein Length": "321.0",
        "Coding Ratio (%)": "89.6",
        "Number of rRNAs": "3",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "18"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Thermus islandicus",
                "strain": "strain=DSM 21543",
                "accession": "GCA_000421625.1",
                "taxid": 540988,
                "species_taxid": 540988,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1994,
                "matched_fragments": 52,
                "total_fragments": 399,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_014360995.1",
                "gtdb_species": "s__DTER01 sp014360995",
                "ani": 80.1759,
                "matched_fragments": 197,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bipolaricaulota;c__Bipolaricaulia;o__Bipolaricaulales;f__Bipolaricaulaceae;g__DTER01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014360945.1",
                "gtdb_species": "s__DTER01 sp014360945",
                "ani": 80.0413,
                "matched_fragments": 160,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bipolaricaulota;c__Bipolaricaulia;o__Bipolaricaulales;f__Bipolaricaulaceae;g__DTER01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011371555.1",
                "gtdb_species": "s__DTER01 sp011371555",
                "ani": 79.296,
                "matched_fragments": 168,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bipolaricaulota;c__Bipolaricaulia;o__Bipolaricaulales;f__Bipolaricaulaceae;g__DTER01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.60",
                "min_intra_species_ani": "97.60",
                "mean_intra_species_af": "0.75",
                "min_intra_species_af": "0.75",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002375935.1",
                "gtdb_species": "s__UBA3574 sp002375935",
                "ani": 78.0377,
                "matched_fragments": 118,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bipolaricaulota;c__Bipolaricaulia;o__Bipolaricaulales;f__Bipolaricaulaceae;g__UBA3574",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.91",
                "min_intra_species_ani": "99.88",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_014361055.1",
                "gtdb_species": "s__JACIWI01 sp014361055",
                "ani": 78.0323,
                "matched_fragments": 145,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bipolaricaulota;c__Bipolaricaulia;o__Bipolaricaulales;f__Bipolaricaulaceae;g__JACIWI01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015661965.1",
                "gtdb_species": "s__UBA3574 sp015661965",
                "ani": 77.7996,
                "matched_fragments": 98,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bipolaricaulota;c__Bipolaricaulia;o__Bipolaricaulales;f__Bipolaricaulaceae;g__UBA3574",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001508155.1",
                "gtdb_species": "s__64-32 sp001508155",
                "ani": 77.7713,
                "matched_fragments": 132,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bipolaricaulota;c__Bipolaricaulia;o__Bipolaricaulales;f__Bipolaricaulaceae;g__64-32",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.06",
                "min_intra_species_ani": "96.14",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_900465355.1",
                "gtdb_species": "s__Bipolaricaulis anaerobius",
                "ani": 77.4375,
                "matched_fragments": 82,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bipolaricaulota;c__Bipolaricaulia;o__Bipolaricaulales;f__Bipolaricaulaceae;g__Bipolaricaulis",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.26",
                "min_intra_species_ani": "97.81",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bipolaricaulota",
        "c__Bipolaricaulia",
        "o__Bipolaricaulales",
        "f__Bipolaricaulaceae",
        "g__DTER01",
        "s__DTER01 sp025060415"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Bipolaricaulota",
        "bacterium",
        "d__Bacteria",
        "p__Bipolaricaulota",
        "c__Bipolaricaulia",
        "o__Bipolaricaulales",
        "f__Bipolaricaulaceae",
        "g__DTER01",
        "s__DTER01 sp025060415",
        "Bacteria",
        "Bipolaricaulota",
        "Bipolaricaulia",
        "Bipolaricaulales",
        "Bipolaricaulaceae",
        "DTER01",
        "DTER01",
        "sp025060415"
    ],
    "_meo": [
        {
            "id": "MEO_0000029",
            "label": "hot spring"
        },
        {
            "id": "MEO_0000730",
            "label": "alkaline hot spring"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}