# locus_id locus_tag location classification internal_stop indel ref_id description query_cov ref_cov identity MGA_6 LOCUS_0050 sequence001:2500..2778(+) internal_stop_codon 2776..2778(+) WP_010902263.1 NYN domain-containing protein 92.4 51.5 52.9 MGA_7 LOCUS_0060 sequence001:2782..3051(+) internal_stop_codon 2776..2778(+) WP_010902263.1 NYN domain-containing protein 80.9 43.6 38.9 MGA_9 LOCUS_0080 sequence001:3934..4146(+) internal_stop_codon 4144..4146(+),4183..4185(+) WP_193484240.1 Na+/H+ antiporter NhaA 98.6 11.0 39.1 MGA_17 LOCUS_0150 sequence002:3514..4044(-) partial WP_011393909.1 30S ribosomal protein S4 87.5 70.7 49.4 MGA_23 LOCUS_0190 sequence003:1407..1868(+) internal_stop_codon 1866..1868(+) WP_010881222.1 preprotein translocase subunit SecA 93.5 14.7 50.3 MGA_24 LOCUS_0200 sequence003:1869..2555(+) internal_stop_codon 2553..2555(+),1866..1868(+) WP_004082002.1 preprotein translocase subunit SecA 100.0 27.3 46.8 MGA_25 LOCUS_0210 sequence003:2676..3605(+) internal_stop_codon 2553..2555(+),3603..3605(+) WP_001829572.1 preprotein translocase subunit SecA 88.0 30.9 51.8 MGA_26 LOCUS_0220 sequence003:3606..3914(+) partial WP_015945439.1 preprotein translocase subunit SecA 91.2 12.7 41.5 MGA_27 LOCUS_0230 sequence003:3924..4412(+) internal_stop_codon 4410..4412(+) WP_009871480.1 class I SAM-dependent methyltransferase 99.4 58.1 25.6 MGA_28 LOCUS_0240 sequence003:4470..4715(+) internal_stop_codon 4410..4412(+) WP_010882838.1 class I SAM-dependent methyltransferase 97.5 29.7 46.3 MGA_30 LOCUS_0260 sequence004:316..1494(+) internal_stop_codon 1492..1494(+) WP_027479895.1 YifB family Mg chelatase-like AAA ATPase 99.5 76.8 50.1 MGA_31 LOCUS_0270 sequence004:1495..1881(+) internal_stop_codon 1492..1494(+) WP_005481190.1 YifB family Mg chelatase-like AAA ATPase 80.5 17.8 39.8 MGA_37 LOCUS_0320 sequence005:153..362(+) internal_stop_codon 141..143(+),360..362(+) WP_003727370.1 tyrosine--tRNA ligase 100.0 17.2 50.0 MGA_38 LOCUS_0330 sequence005:417..713(+) internal_stop_codon 141..143(+),360..362(+),711..713(+) WP_012870294.1 tyrosine--tRNA ligase 96.9 22.1 52.6 MGA_39 LOCUS_0340 sequence005:726..1217(+) internal_stop_codon 711..713(+) WP_002357324.1 tyrosine--tRNA ligase 97.5 41.0 37.9 MGA_41 LOCUS_0360 sequence005:1734..1955(-) internal_stop_codon 2049..2051(-) WP_011404996.1 cation:proton antiporter 91.8 12.4 40.3 MGA_42 LOCUS_0370 sequence005:2586..2900(-) internal_stop_codon 2577..2579(-),2586..2588(-) WP_000399950.1 cation:proton antiporter 96.2 17.1 30.7 MGA_43 LOCUS_0380 sequence005:2969..3109(-) internal_stop_codon 3128..3130(-),3401..3403(-) WP_011389825.1 aspartate--tRNA ligase 95.7 7.3 56.8 MGA_44 LOCUS_0390 sequence005:3128..3358(-) internal_stop_codon 3128..3130(-),3464..3466(-),3401..3403(-) WP_010932992.1 aspartate--tRNA ligase 85.5 10.8 55.4 MGA_45 LOCUS_0400 sequence005:3464..4288(-) internal_stop_codon 4316..4318(-) WP_001830852.1 aspartate--tRNA ligase 95.6 44.2 44.3 MGA_46 LOCUS_0410 sequence006:3..488(-) internal_stop_codon 603..605(-) WP_098061311.1 replicative DNA helicase 85.7 17.2 52.4 MGA_47 LOCUS_0420 sequence006:603..764(-) internal_stop_codon 603..605(-),876..878(-) WP_004082256.1 replicative DNA helicase 98.1 11.5 61.5 MGA_48 LOCUS_0430 sequence006:876..1445(-) internal_stop_codon 603..605(-),876..878(-) WP_003975021.1 replicative DNA helicase 86.2 33.0 34.4 MGA_50 LOCUS_0450 sequence006:2227..2898(-) internal_stop_codon 2227..2229(-) WP_151756788.1 type IV secretion system DNA-binding domain-containing protein 92.8 21.6 24.5 MGA_54 LOCUS_0470 sequence007:263..502(+) internal_stop_codon 518..520(+),500..502(+),545..547(+) WP_012804649.1 proline--tRNA ligase 98.7 13.1 50.0 MGA_55 LOCUS_0480 sequence007:560..1342(+) internal_stop_codon 518..520(+),1340..1342(+),500..502(+),545..547(+) WP_004597559.1 proline--tRNA ligase 96.5 60.6 36.8 MGA_56 LOCUS_0490 sequence007:1352..1516(+) internal_stop_codon 1340..1342(+) WP_010971520.1 proline--tRNA ligase 96.3 11.8 44.2 MGA_58 LOCUS_0510 sequence007:3295..3963(+) internal_stop_codon 3961..3963(+),4135..4137(+) WP_009936521.1 cytochrome c biogenesis protein DipZ 89.6 28.2 22.8 MGA_59 LOCUS_0520 sequence007:3991..4137(+) internal_stop_codon 3961..3963(+),4135..4137(+) WP_186447661.1 cytochrome c biogenesis protein DipZ 100.0 8.1 58.3 MGA_60 LOCUS_0530 sequence008:114..554(-) partial WP_010880428.1 translation elongation factor Ts 98.6 51.4 36.2 MGA_62 LOCUS_0550 sequence008:1458..2510(-) internal_stop_codon 2532..2534(-),2550..2552(-) WP_139120446.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 91.7 63.9 24.0 MGA_66 LOCUS_0590 sequence009:573..1157(-) internal_stop_codon 1173..1175(-) WP_005809406.1 ABC transporter permease 100.0 47.8 40.5 MGA_67 LOCUS_0600 sequence009:1173..1787(-) internal_stop_codon 1173..1175(-) WP_012583204.1 ABC transporter permease 97.1 49.4 36.5 MGA_73 LOCUS_0640 sequence010:713..1030(-) internal_stop_codon 584..586(-),713..715(-) WP_010978631.1 FAD-binding protein 86.7 17.5 38.0 MGA_74 LOCUS_0650 sequence010:1082..2530(-) internal_stop_codon 2594..2596(-) WP_000435982.1 DNA topoisomerase (ATP-hydrolyzing) subunit B 98.5 68.6 52.1 MGA_75 LOCUS_0660 sequence010:2594..3163(-) internal_stop_codon 2594..2596(-) WP_003131421.1 DNA topoisomerase (ATP-hydrolyzing) subunit B 95.8 28.0 58.8 MGA_78 LOCUS_0680 sequence011:306..1670(+) internal_stop_codon 1707..1709(+),1668..1670(+),192..194(+),1773..1775(+) WP_012257770.1 PBP1A family penicillin-binding protein 100.0 53.2 35.4 MGA_80 LOCUS_0700 sequence011:2264..3469(-) internal_stop_codon 3716..3718(-),2234..2236(-),3533..3535(-),3530..3532(-),2264..2266(-),3755..3757(-) WP_002679355.1 alanine--tRNA ligase 94.5 59.0 39.3 MGA_103 LOCUS_0870 sequence015:1491..2219(-) internal_stop_codon 1491..1493(-),2232..2234(-) WP_003546517.1 DNA translocase FtsK 99.6 26.6 40.9 MGA_104 LOCUS_0880 sequence015:2232..3353(-) internal_stop_codon 2232..2234(-) WP_010891893.1 DNA translocase FtsK 57.4 23.0 43.6 MGA_105 LOCUS_0890 sequence016:1..539(+) partial WP_003640783.1 glycosyltransferase family 4 protein 82.0 38.6 31.1 MGA_106 LOCUS_0900 sequence016:574..1206(+) internal_stop_codon 1204..1206(+) WP_010942137.1 type IV-A pilus assembly ATPase PilB 89.0 31.0 26.6 MGA_107 LOCUS_0910 sequence016:1231..2274(+) internal_stop_codon 1204..1206(+) WP_012583238.1 type II secretion system ATPase GspE 97.7 37.7 43.1 MGA_111 LOCUS_0930 sequence017:141..512(+) internal_stop_codon 87..89(+),510..512(+) WP_011962512.1 DNA polymerase III subunit alpha 88.6 7.6 29.6 MGA_112 LOCUS_0940 sequence017:555..1733(+) internal_stop_codon 1731..1733(+),1860..1862(+),510..512(+) WP_012048304.1 DNA polymerase III subunit alpha 96.4 31.5 43.5 MGA_113 LOCUS_0950 sequence017:1947..2489(+) internal_stop_codon 1731..1733(+),2538..2540(+),1860..1862(+),2487..2489(+) WP_012583743.1 DNA polymerase III subunit alpha 85.6 13.3 43.9 MGA_115 LOCUS_0970 sequence017:2906..>3509(-) partial WP_012258775.1 chromosome segregation protein SMC 99.0 16.3 37.5 MGA_123 LOCUS_1040 sequence019:760..1065(+) internal_stop_codon 1063..1065(+),634..636(+) WP_010942720.1 rod shape-determining protein RodA 100.0 27.6 41.6 MGA_124 LOCUS_1050 sequence019:1081..1266(+) internal_stop_codon 1063..1065(+) WP_003699953.1 FtsW/RodA/SpoVE family cell cycle protein 83.6 11.8 54.9 MGA_125 LOCUS_1060 sequence019:1285..2091(-) internal_stop_codon 2239..2241(-) WP_011016292.1 histidine--tRNA ligase 92.9 58.1 31.7 MGA_126 LOCUS_1070 sequence019:2239..2607(-) internal_stop_codon 2239..2241(-) WP_012545147.1 histidine--tRNA ligase 86.9 25.2 45.3 MGA_129 LOCUS_1100 sequence020:1..1222(+) internal_stop_codon 1220..1222(+) WP_009993765.1 ribonuclease J 98.0 60.4 37.2 MGA_130 LOCUS_1110 sequence020:1319..1777(+) internal_stop_codon 1220..1222(+) WP_000811375.1 ribonuclease J 98.7 26.0 36.4 MGA_132 LOCUS_1130 sequence020:2144..2623(+) internal_stop_codon 2042..2044(+),2621..2623(+) WP_011228863.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 100.0 23.1 41.7 MGA_133 LOCUS_1140 sequence020:2630..2950(+) internal_stop_codon 2621..2623(+),2969..2971(+),2948..2950(+) WP_011254292.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 98.1 13.8 55.8 MGA_134 LOCUS_1150 sequence020:3068..3247(+) internal_stop_codon 2969..2971(+),3245..3247(+),2948..2950(+) WP_011254292.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 96.6 7.6 47.4 MGA_136 LOCUS_1160 sequence021:180..1082(-) internal_stop_codon 1125..1127(-),180..182(-) WP_011393945.1 DNA-directed RNA polymerase subunit beta 100.0 26.3 65.3 MGA_137 LOCUS_1170 sequence021:1125..2480(-) internal_stop_codon 1125..1127(-),2643..2645(-) WP_011088159.1 DNA-directed RNA polymerase subunit beta 98.2 32.6 48.8 MGA_138 LOCUS_1180 sequence021:2643..2792(-) internal_stop_codon 2940..2942(-),2643..2645(-) WP_012048357.1 DNA-directed RNA polymerase subunit beta 100.0 4.1 62.0 MGA_142 LOCUS_1220 sequence022:1847..2461(+) partial WP_012256101.1 histidine kinase N-terminal 7TM domain-containing protein 92.2 24.1 34.9 MGA_143 LOCUS_1230 sequence022:2465..2842(+) partial WP_016348992.1 response regulator transcription factor 68.0 34.2 34.1 MGA_147 LOCUS_1260 sequence023:2308..2547(-) internal_stop_codon 2605..2607(-) WP_011056149.1 transcription termination/antitermination protein NusG 100.0 34.8 49.4 MGA_156 LOCUS_1330 sequence025:1..1723(+) internal_stop_codon 1721..1723(+) WP_012546498.1 excinuclease ABC subunit UvrA 92.7 62.7 41.5 MGA_157 LOCUS_1340 sequence025:1754..2212(+) internal_stop_codon 1721..1723(+) WP_004081486.1 excinuclease ABC subunit UvrA 98.7 16.4 58.0 MGA_158 LOCUS_1350 sequence025:2457..2918(+) internal_stop_codon 2412..2414(+) WP_012257533.1 peptide-methionine (S)-S-oxide reductase MsrA 98.7 82.9 49.0 MGA_163 LOCUS_1390 sequence026:1656..>3079(-) partial WP_012583203.1 efflux RND transporter periplasmic adaptor subunit 56.7 60.0 27.7 MGA_166 LOCUS_1410 sequence027:1756..2373(-) internal_stop_codon 2410..2412(-) WP_010879987.1 type I methionyl aminopeptidase 98.0 78.7 48.0 MGA_168 LOCUS_1430 sequence027:2592..2888(-) partial WP_011183011.1 ATP synthase F1 subunit gamma 86.7 29.5 52.9 MGA_170 LOCUS_1440 sequence028:230..1135(+) internal_stop_codon 1133..1135(+) WP_003020904.1 M3 family metallopeptidase 100.0 44.6 27.8 MGA_171 LOCUS_1450 sequence028:1202..1990(+) internal_stop_codon 1133..1135(+) WP_008765304.1 M3 family metallopeptidase 91.2 34.3 39.8 MGA_173 LOCUS_1470 sequence029:167..346(+) internal_stop_codon 344..346(+),98..100(+) WP_003701972.1 DNA-directed RNA polymerase subunit beta' 100.0 4.8 79.7 MGA_174 LOCUS_1480 sequence029:350..595(+) internal_stop_codon 344..346(+),98..100(+) WP_007051319.1 DNA-directed RNA polymerase subunit beta' 81.5 5.3 47.9 MGA_175 LOCUS_1490 sequence029:632..1357(+) internal_stop_codon 1355..1357(+) WP_005904068.1 DNA-directed RNA polymerase subunit beta' 99.2 18.0 57.5 MGA_176 LOCUS_1500 sequence029:1484..1666(+) internal_stop_codon 1664..1666(+),1355..1357(+) WP_003892756.1 DNA-directed RNA polymerase subunit beta' 100.0 4.6 61.7 MGA_177 LOCUS_1510 sequence029:1667..2029(+) internal_stop_codon 1664..1666(+),2027..2029(+),2168..2170(+) WP_193345594.1 DNA-directed RNA polymerase subunit beta' 95.0 9.2 33.3 MGA_181 LOCUS_1530 sequence030:470..733(+) internal_stop_codon 731..733(+) WP_011947925.1 thymidylate kinase 94.3 33.8 42.7 MGA_182 LOCUS_1540 sequence030:734..1057(+) internal_stop_codon 1055..1057(+),731..733(+) WP_011017068.1 thymidylate kinase 94.4 45.8 41.1 MGA_188 LOCUS_1590 sequence031:1338..2354(+) internal_stop_codon 1326..1328(+),2529..2531(+),2352..2354(+),2475..2477(+) WP_011861114.1 ATP-binding protein 100.0 43.5 26.3 MGA_192 LOCUS_1620 sequence032:1304..1492(+) internal_stop_codon 1490..1492(+) WP_002895888.1 permease-like cell division protein FtsX 93.5 18.8 39.7 MGA_197 LOCUS_1660 sequence033:1156..1839(+) internal_stop_codon 1135..1137(+) WP_011166554.1 DNA recombination protein RmuC 90.3 59.0 32.4 MGA_202 LOCUS_1700 sequence034:188..364(+) internal_stop_codon 113..115(+) WP_002356218.1 50S ribosomal protein L18 98.3 48.3 57.9 MGA_203 LOCUS_1710 sequence034:376..1020(+) partial WP_023174069.1 30S ribosomal protein S5 75.2 73.7 42.6 MGA_206 LOCUS_1740 sequence034:2022..2273(-) internal_stop_codon 2022..2024(-) WP_003688932.1 (d)CMP kinase 92.8 35.3 37.7 MGA_209 LOCUS_1750 sequence035:415..561(-) internal_stop_codon 646..648(-) WP_015776377.1 50S ribosomal protein L3 93.8 19.9 53.3 MGA_210 LOCUS_1760 sequence035:646..1026(-) internal_stop_codon 646..648(-) WP_011393937.1 50S ribosomal protein L3 96.8 60.3 43.7 MGA_212 LOCUS_1780 sequence035:1396..1944(-) internal_stop_codon 2026..2028(-),1984..1986(-) WP_003806883.1 elongation factor Tu 99.5 45.7 69.6 MGA_213 LOCUS_1790 sequence035:2026..2589(-) internal_stop_codon 2026..2028(-),1984..1986(-) WP_010940180.1 elongation factor Tu 97.9 45.8 74.3 MGA_216 LOCUS_1810 sequence036:732..1214(-) internal_stop_codon 1251..1253(-) WP_005784203.1 glycine--tRNA ligase 98.8 29.2 46.2 MGA_217 LOCUS_1820 sequence036:1425..2042(-) internal_stop_codon 1425..1427(-),2052..2054(-),1251..1253(-),1365..1367(-),1410..1412(-) WP_011183165.1 glycine--tRNA ligase 83.4 36.8 51.4 MGA_218 LOCUS_1830 sequence036:2052..2207(-) internal_stop_codon 2052..2054(-) WP_011228014.1 glycine--tRNA ligase 88.2 8.9 57.8 MGA_221 LOCUS_1860 sequence037:147..797(+) partial WP_011183286.1 RluA family pseudouridine synthase 98.6 66.2 36.3 MGA_222 LOCUS_1870 sequence037:814..2121(+) internal_stop_codon 2386..2388(+),2119..2121(+) WP_012583469.1 translation elongation factor 4 99.1 71.7 51.0 MGA_223 LOCUS_1880 sequence037:2140..2388(+) internal_stop_codon 2386..2388(+),2119..2121(+) WP_010947592.1 translation elongation factor 4 97.6 13.1 35.0 MGA_225 LOCUS_1890 sequence038:329..607(-) internal_stop_codon 767..769(-) WP_002851181.1 DNA primase 62.0 9.4 49.1 MGA_226 LOCUS_1900 sequence038:929..1375(-) internal_stop_codon 929..931(-),767..769(-),821..823(-) WP_012546187.1 DNA primase 95.3 25.6 43.4 MGA_230 LOCUS_1920 sequence039:121..1092(-) internal_stop_codon 1132..1134(-),1258..1260(-) WP_010958589.1 type I DNA topoisomerase 94.1 39.3 39.5 MGA_231 LOCUS_1930 sequence039:1258..1518(-) internal_stop_codon 1258..1260(-),1132..1134(-),1633..1635(-) WP_011964077.1 type I DNA topoisomerase 100.0 10.3 54.7 MGA_232 LOCUS_1940 sequence039:1633..1920(-) internal_stop_codon 1633..1635(-),2062..2064(-) WP_003547140.1 type I DNA topoisomerase 94.7 12.8 41.1 MGA_233 LOCUS_1950 sequence039:2062..2226(-) internal_stop_codon 2266..2268(-),2062..2064(-) WP_027480031.1 type I DNA topoisomerase 88.9 4.9 52.1 MGA_234 LOCUS_1960 sequence039:2266..2421(-) internal_stop_codon 2266..2268(-),2062..2064(-) WP_011013552.1 type I DNA topoisomerase 66.7 3.4 79.4 MGA_236 LOCUS_1970 sequence040:554..835(+) internal_stop_codon 833..835(+),476..478(+),914..916(+) WP_005791545.1 50S ribosomal protein L2 100.0 33.9 50.5 MGA_237 LOCUS_1980 sequence040:950..1129(+) internal_stop_codon 833..835(+),914..916(+) WP_003357299.1 50S ribosomal protein L2 84.7 18.1 60.0 MGA_239 LOCUS_2000 sequence040:1260..1478(+) internal_stop_codon 1230..1232(+) WP_010943482.1 30S ribosomal protein S19 69.4 53.8 60.0 MGA_241 LOCUS_2020 sequence040:1919..2464(+) internal_stop_codon 1880..1882(+),2462..2464(+),1892..1894(+) WP_010966406.1 30S ribosomal protein S3 99.4 77.9 41.7 MGA_243 LOCUS_2030 sequence041:380..1174(+) internal_stop_codon 1409..1411(+),1172..1174(+) WP_011986767.1 HD domain-containing protein 93.9 53.6 42.2 MGA_248 LOCUS_2070 sequence042:963..1655(-) internal_stop_codon 1677..1679(-),963..965(-) WP_161889612.1 ribonuclease R 99.6 29.6 43.9 MGA_253 LOCUS_2100 sequence043:330..917(-) internal_stop_codon 948..950(-) WP_005112950.1 tRNA guanosine(34) transglycosylase Tgt 93.8 46.8 45.8 MGA_254 LOCUS_2110 sequence043:948..1310(-) internal_stop_codon 1332..1334(-),948..950(-) WP_020309519.1 tRNA guanosine(34) transglycosylase Tgt 99.2 25.1 49.6 MGA_255 LOCUS_2120 sequence043:1332..1619(-) internal_stop_codon 1332..1334(-) WP_003897733.1 tRNA guanosine(34) transglycosylase Tgt 74.7 17.1 67.6 MGA_259 LOCUS_2140 sequence044:155..946(-) internal_stop_codon 974..976(-) WP_002657618.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 98.9 54.5 35.5 MGA_260 LOCUS_2150 sequence044:974..1438(-) internal_stop_codon 974..976(-) WP_012258202.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 61.7 18.7 37.9 MGA_261 LOCUS_2160 sequence044:1467..1745(+) partial WP_010940329.1 Holliday junction resolvase RuvX 100.0 66.2 29.8 MGA_267 LOCUS_2200 sequence045:1605..1865(+) internal_stop_codon 2115..2117(+),1518..1520(+),1458..1460(+),1596..1598(+),1863..1865(+) WP_002669913.1 Fe-S cluster assembly protein SufB 100.0 17.4 58.1 MGA_268 LOCUS_2210 sequence045:1899..2117(+) internal_stop_codon 2181..2183(+),2115..2117(+),1863..1865(+) WP_004081565.1 Fe-S cluster assembly protein SufB 100.0 15.5 55.6 MGA_274 LOCUS_2240 sequence047:839..1318(-) internal_stop_codon 1328..1330(-),839..841(-),707..709(-) WP_037393616.1 phosphoglycerate kinase 99.4 44.4 28.8 MGA_275 LOCUS_2250 sequence047:1328..1717(-) internal_stop_codon 1328..1330(-) WP_010880017.1 phosphoglycerate kinase 83.7 27.5 33.3 MGA_277 LOCUS_2270 sequence047:1959..2471(-) internal_stop_codon 1959..1961(-) WP_009874260.1 triose-phosphate isomerase 86.5 57.3 37.6 MGA_286 LOCUS_2350 sequence049:1463..1771(+) internal_stop_codon 1451..1453(+),1769..1771(+) WP_011261163.1 type II secretion system F family protein 99.0 24.8 39.6 MGA_287 LOCUS_2360 sequence049:1802..2314(+) internal_stop_codon 1769..1771(+) WP_010888498.1 type II secretion system F family protein 100.0 41.6 30.6 MGA_293 LOCUS_2400 sequence051:631..915(-) internal_stop_codon 940..942(-),586..588(-),631..633(-),457..459(-) WP_041424295.1 methionine--tRNA ligase 95.7 17.0 42.9 MGA_294 LOCUS_2410 sequence051:940..1269(-) internal_stop_codon 940..942(-) WP_097532087.1 methionine--tRNA ligase 91.7 15.0 46.0 MGA_307 LOCUS_2520 sequence054:1435..1632(-) internal_stop_codon 1660..1662(-),1306..1308(-),1435..1437(-) WP_013529249.1 type I glyceraldehyde-3-phosphate dehydrogenase 96.9 18.8 58.7 MGA_308 LOCUS_2530 sequence054:1660..1983(-) internal_stop_codon 2005..2007(-),1435..1437(-),1660..1662(-) WP_011055898.1 type I glyceraldehyde-3-phosphate dehydrogenase 100.0 30.9 48.6 MGA_312 LOCUS_2550 sequence055:911..1759(-) internal_stop_codon 1883..1885(-) WP_011962511.1 LD-carboxypeptidase 95.4 77.2 36.7 MGA_317 LOCUS_2570 sequence057:504..707(-) internal_stop_codon 714..716(-),387..389(-),273..275(-),504..506(-),807..809(-),354..356(-) WP_010947500.1 ribonucleoside-diphosphate reductase subunit alpha 100.0 7.1 61.2 MGA_318 LOCUS_2580 sequence057:807..1193(-) internal_stop_codon 1278..1280(-),807..809(-),1320..1322(-),714..716(-) WP_010903780.1 ribonucleoside-diphosphate reductase subunit alpha 99.2 15.7 51.2 MGA_319 LOCUS_2590 sequence057:1320..1490(-) internal_stop_codon 1278..1280(-),1770..1772(-),1320..1322(-),1593..1595(-),1506..1508(-) WP_003082358.1 ribonucleoside-diphosphate reductase subunit alpha 100.0 5.8 66.1 MGA_322 LOCUS_2610 sequence058:163..327(+) internal_stop_codon 325..327(+),352..354(+) WP_011763353.1 nucleoside-diphosphate kinase 79.6 23.5 74.4 MGA_323 LOCUS_2620 sequence058:403..702(+) internal_stop_codon 700..702(+),325..327(+),352..354(+) WP_011763353.1 nucleoside-diphosphate kinase 88.9 46.4 42.0 MGA_328 LOCUS_2670 sequence059:731..1240(+) internal_stop_codon 1238..1240(+),1265..1267(+) WP_008882242.1 penicillin-binding protein 2 98.8 24.4 35.5 MGA_331 LOCUS_2700 sequence060:117..296(-) internal_stop_codon 399..401(-) WP_000004170.1 molecular chaperone DnaJ 96.6 15.3 40.4 MGA_332 LOCUS_2710 sequence060:399..1112(-) internal_stop_codon 399..401(-) WP_002468806.1 molecular chaperone DnaJ 97.5 67.3 40.9 MGA_334 LOCUS_2730 sequence060:1301..1642(-) internal_stop_codon 1301..1303(-) WP_011228578.1 thioredoxin-dependent thiol peroxidase 88.5 63.3 56.0 MGA_349 LOCUS_2830 sequence063:1639..1836(-) internal_stop_codon 1639..1641(-),1489..1491(-) WP_010945922.1 secondary thiamine-phosphate synthase enzyme YjbQ 98.5 41.8 70.3 MGA_353 LOCUS_2870 sequence064:847..2013(-) internal_stop_codon 847..849(-) WP_012583569.1 translation initiation factor IF-2 96.6 56.2 40.8 MGA_359 LOCUS_2930 sequence066:189..530(+) internal_stop_codon 120..122(+) WP_009902204.1 ABC transporter 100.0 37.3 40.7 MGA_361 LOCUS_2950 sequence066:1349..1672(+) internal_stop_codon 1682..1684(+),1670..1672(+) WP_004524472.1 UvrD-helicase domain-containing protein 95.3 15.8 46.4 MGA_366 LOCUS_2980 sequence067:919..1530(-) internal_stop_codon 1582..1584(-) WP_012869993.1 LysM peptidoglycan-binding domain-containing M23 family metallopeptidase 94.6 41.9 34.7 MGA_371 LOCUS_3010 sequence069:471..1343(-) partial WP_137607921.1 Ig-like domain-containing protein 34.5 6.3 51.0 MGA_374 LOCUS_3030 sequence070:116..481(-) internal_stop_codon 116..118(-),512..514(-) WP_011017071.1 isoprenyl transferase 100.0 52.6 45.9 MGA_375 LOCUS_3040 sequence070:512..1063(-) partial WP_011023295.1 acylphosphatase 39.9 80.4 36.0 MGA_376 LOCUS_3050 sequence070:1175..1534(-) internal_stop_codon 1175..1177(-),1634..1636(-) WP_011056003.1 peptide chain release factor 1 97.5 31.9 62.1 MGA_379 LOCUS_3060 sequence071:735..1172(+) internal_stop_codon 663..665(+),486..488(+),1170..1172(+),1320..1322(+) WP_012583528.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB 97.2 29.7 43.9 MGA_380 LOCUS_3070 sequence071:1353..1856(+) frameshift,internal_stop_codon 1170..1172(+) 1350,1319 WP_012545415.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB 94.0 32.8 26.7 MGA_388 LOCUS_3130 sequence074:1163..1495(+) internal_stop_codon 1493..1495(+),908..910(+),1028..1030(+) WP_002680710.1 isoleucine--tRNA ligase 97.3 11.3 29.0 MGA_394 LOCUS_3180 sequence075:1321..1500(+) internal_stop_codon 1498..1500(+) WP_010932643.1 transketolase 91.5 17.2 61.1 MGA_395 LOCUS_3190 sequence075:1516..1806(+) internal_stop_codon 1804..1806(+),1498..1500(+) WP_001002663.1 transketolase 97.9 33.2 48.9 MGA_396 LOCUS_3200 sequence076:114..284(+) internal_stop_codon 282..284(+),468..470(+),111..113(+) WP_012545538.1 valine--tRNA ligase 94.6 5.6 52.8 MGA_398 LOCUS_3220 sequence076:726..1127(+) internal_stop_codon 1278..1280(+),468..470(+),1323..1325(+),579..581(+),1125..1127(+),1377..1379(+),1257..1259(+),648..650(+),1407..1409(+) WP_010965695.1 valine--tRNA ligase 100.0 14.9 39.8 MGA_399 LOCUS_3230 sequence076:1536..1790(+) internal_stop_codon 1278..1280(+),1323..1325(+),1425..1427(+),1377..1379(+),1446..1448(+),1524..1526(+),1788..1790(+),1257..1259(+),1407..1409(+) WP_010965695.1 valine--tRNA ligase 100.0 9.5 53.6 MGA_404 LOCUS_3260 sequence078:73..282(+) internal_stop_codon 280..282(+) WP_010943479.1 50S ribosomal protein L16 100.0 45.7 47.8 MGA_405 LOCUS_3270 sequence078:334..492(+) internal_stop_codon 280..282(+) WP_003225801.1 50S ribosomal protein L16 100.0 36.1 65.4 MGA_406 LOCUS_3280 sequence078:505..768(+) partial WP_010879936.1 30S ribosomal protein S17 83.9 68.2 58.9 MGA_407 LOCUS_3290 sequence078:898..1161(+) internal_stop_codon 832..834(+) WP_010946088.1 50S ribosomal protein L14 98.9 66.9 50.0 MGA_408 LOCUS_3300 sequence078:1179..1412(+) partial WP_003728539.1 50S ribosomal protein L24 92.2 69.9 50.0 MGA_418 LOCUS_3360 sequence081:853..1092(+) internal_stop_codon 1090..1092(+) WP_011057302.1 branched-chain amino acid transaminase 88.6 22.8 50.0 MGA_419 LOCUS_3370 sequence081:1096..1764(+) internal_stop_codon 1090..1092(+) WP_011125110.1 branched-chain amino acid transaminase 96.8 70.4 50.9 MGA_420 LOCUS_3380 sequence082:1..995(+) internal_stop_codon 993..995(+) WP_012583464.1 S41 family peptidase 94.5 78.5 39.9 MGA_432 LOCUS_3470 sequence085:203..862(-) internal_stop_codon 905..907(-),203..205(-),863..865(-) WP_012583162.1 RIP metalloprotease RseP 84.9 51.4 32.3 MGA_433 LOCUS_3480 sequence085:905..1180(-) internal_stop_codon 905..907(-),863..865(-) WP_010942559.1 RIP metalloprotease RseP 85.7 21.4 51.3 MGA_435 LOCUS_3500 sequence086:226..861(+) internal_stop_codon 859..861(+) WP_011836621.1 zinc metalloprotease HtpX 94.3 69.5 44.7 MGA_437 LOCUS_3510 sequence087:8..1072(+) partial WP_011021593.1 DNA gyrase subunit A 98.6 36.4 40.7 MGA_442 LOCUS_3540 sequence089:1272..1508(-) internal_stop_codon 1272..1274(-),1509..1511(-) WP_003832662.1 elongation factor G 98.7 10.5 63.6 MGA_443 LOCUS_3550 sequence089:1509..1664(-) internal_stop_codon 1272..1274(-),1509..1511(-) WP_014538014.1 elongation factor G 100.0 7.2 78.4 MGA_444 LOCUS_3560 sequence090:266..451(+) internal_stop_codon 449..451(+),485..487(+),638..640(+) WP_011020870.1 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 98.4 11.0 51.7 MGA_445 LOCUS_3570 sequence090:641..931(+) internal_stop_codon 929..931(+),449..451(+),485..487(+),638..640(+) WP_064496733.1 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 100.0 17.9 41.7 MGA_446 LOCUS_3580 sequence090:935..1624(+) internal_stop_codon 929..931(+) WP_011020870.1 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 97.8 38.4 39.4 MGA_447 LOCUS_3590 sequence091:212..1312(+) frameshift 1279 WP_010978180.1 CTP synthase 97.5 70.4 41.2 MGA_448 LOCUS_3600 sequence091:1417..1599(+) frameshift 1279 WP_001829895.1 CTP synthase 80.0 9.0 47.9 MGA_450 LOCUS_3610 sequence092:379..1182(-) internal_stop_codon 1243..1245(-),1192..1194(-) WP_012256652.1 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 70.4 38.0 29.8 MGA_458 LOCUS_3650 sequence095:742..1002(+) internal_stop_codon 1000..1002(+),1129..1131(+) WP_012545727.1 site-2 protease family protein 98.8 41.7 56.0 MGA_474 LOCUS_3740 sequence101:314..796(-) internal_stop_codon 314..316(-),845..847(-) WP_011948825.1 tRNA 2-thiouridine(34) synthase MnmA 99.4 35.7 37.1 MGA_475 LOCUS_3750 sequence102:50..460(+) internal_stop_codon 719..721(+),458..460(+) WP_010966473.1 lysine--tRNA ligase 79.4 21.7 31.9 MGA_476 LOCUS_3760 sequence102:482..721(+) internal_stop_codon 719..721(+),962..964(+),458..460(+) WP_011173121.1 lysine--tRNA ligase 96.2 15.4 44.7 MGA_477 LOCUS_3770 sequence102:734..964(+) internal_stop_codon 719..721(+),458..460(+) WP_000128764.1 lysine--tRNA ligase 96.1 14.3 47.9 MGA_478 LOCUS_3780 sequence102:1169..1354(+) internal_stop_codon 1352..1354(+) WP_010933055.1 lysine--tRNA ligase 100.0 12.1 51.6 MGA_480 LOCUS_3790 sequence103:371..802(-) internal_stop_codon 839..841(-) WP_011403314.1 3'-5' exonuclease 75.5 13.4 50.0 MGA_481 LOCUS_3800 sequence103:839..1237(-) internal_stop_codon 839..841(-),1364..1366(-) WP_011058290.1 DNA helicase PcrA 100.0 19.7 30.9 MGA_482 LOCUS_3810 sequence103:1364..1543(-) internal_stop_codon 1364..1366(-),1568..1570(-) WP_005109736.1 DNA helicase PcrA 88.1 6.6 61.5 MGA_486 LOCUS_3830 sequence105:655..1389(-) partial WP_000832779.1 putative lipid II flippase FtsW 86.9 56.7 28.7 MGA_488 LOCUS_3840 sequence106:79..942(-) internal_stop_codon 958..960(-) WP_010918063.1 type II secretion system ATPase GspE 89.2 49.7 47.9 MGA_489 LOCUS_3850 sequence106:958..1383(-) internal_stop_codon 958..960(-) WP_012583238.1 type II secretion system ATPase GspE 70.2 11.9 41.3 MGA_492 LOCUS_3860 sequence107:631..1185(-) internal_stop_codon 592..594(-),631..633(-) WP_010966431.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB 98.4 68.3 37.6 MGA_498 LOCUS_3900 sequence109:751..999(-) internal_stop_codon 751..753(-),1000..1002(-) WP_011101007.1 tRNA-dihydrouridine synthase 96.3 23.7 50.0 MGA_499 LOCUS_3910 sequence109:1000..>1520(-) internal_stop_codon 751..753(-),1000..1002(-) WP_000566703.1 tRNA-dihydrouridine synthase 97.7 45.9 37.3 MGA_500 LOCUS_3920 sequence110:67..861(-) internal_stop_codon 913..915(-) WP_005811709.1 MBL fold metallo-hydrolase 98.1 44.7 36.7 MGA_502 LOCUS_3940 sequence110:1051..1455(-) internal_stop_codon 913..915(-),1051..1053(-) WP_010931030.1 MBL fold metallo-hydrolase 82.1 24.3 50.9 MGA_504 LOCUS_3950 sequence111:76..1053(+) partial WP_011056582.1 ATP-dependent DNA helicase RecG 100.0 40.3 45.0 MGA_506 LOCUS_3960 sequence112:173..340(-) internal_stop_codon 440..442(-),173..175(-) WP_000666552.1 ABC transporter ATP-binding protein 90.9 16.4 56.0 MGA_507 LOCUS_3970 sequence112:440..727(-) internal_stop_codon 440..442(-),173..175(-) WP_010921202.1 ABC transporter ATP-binding protein 90.5 27.4 45.3 MGA_509 LOCUS_3990 sequence113:202..708(-) internal_stop_codon 898..900(-),202..204(-) WP_004081384.1 methionyl-tRNA formyltransferase 95.2 51.1 40.0 MGA_522 LOCUS_4060 sequence117:89..616(+) internal_stop_codon 644..646(+),845..847(+),614..616(+),812..814(+) WP_004399675.1 glutamate--tRNA ligase 93.7 30.2 40.9 MGA_523 LOCUS_4070 sequence117:677..814(+) internal_stop_codon 644..646(+),845..847(+),614..616(+),812..814(+) WP_003435581.1 glutamate--tRNA ligase 97.8 9.1 55.6 MGA_532 LOCUS_4120 sequence120:397..873(-) internal_stop_codon 397..399(-),220..222(-) WP_011262638.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH 82.3 38.3 33.8 MGA_536 LOCUS_4160 sequence122:1..1343(+) partial WP_012546043.1 ATP-dependent chaperone ClpB 93.5 47.6 48.0 MGA_539 LOCUS_4190 sequence124:290..568(-) internal_stop_codon 590..592(-),290..292(-),803..805(-) WP_033179107.1 leucine--tRNA ligase 89.1 10.4 41.4 MGA_540 LOCUS_4200 sequence124:590..748(-) internal_stop_codon 953..955(-),938..940(-),869..871(-),590..592(-),932..934(-),803..805(-) WP_015545302.1 leucine--tRNA ligase 88.5 5.7 65.2 MGA_541 LOCUS_4210 sequence124:953..1180(-) internal_stop_codon 1250..1252(-),953..955(-),938..940(-),869..871(-),1226..1228(-),932..934(-),803..805(-) WP_010933314.1 leucine--tRNA ligase 86.7 6.1 50.8 MGA_544 LOCUS_4220 sequence125:566..1141(-) internal_stop_codon 566..568(-),1157..1159(-) WP_011108085.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 98.4 40.8 34.6 MGA_545 LOCUS_4230 sequence125:1157..1351(-) internal_stop_codon 1157..1159(-) WP_011964114.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 100.0 14.9 43.1 MGA_546 LOCUS_4240 sequence126:125..508(-) internal_stop_codon 527..529(-) WP_000395259.1 TerC family protein 99.2 51.7 27.8 MGA_549 LOCUS_4250 sequence127:1..540(+) frameshift,internal_stop_codon 622..624(+) 504 WP_151756788.1 type IV secretion system DNA-binding domain-containing protein 84.4 15.3 32.5 MGA_550 LOCUS_4260 sequence127:714..1355(+) partial WP_052846540.1 type IV secretion system DNA-binding domain-containing protein 70.9 14.3 31.6 MGA_553 LOCUS_4280 sequence128:655..861(+) internal_stop_codon 859..861(+),952..954(+),1036..1038(+),1105..1107(+),907..909(+) WP_011837305.1 site-specific DNA-methyltransferase 89.7 22.8 52.5 MGA_556 LOCUS_4300 sequence129:548..>1349(-) internal_stop_codon 548..550(-) WP_012047859.1 DNA-processing protein DprA 85.3 63.2 40.5 MGA_557 LOCUS_4310 sequence130:60..674(-) partial WP_081447059.1 50S ribosomal protein L25/general stress protein Ctc 72.1 75.4 35.1 MGA_563 LOCUS_4340 sequence132:303..1001(+) partial WP_005811776.1 ABC transporter substrate-binding protein 96.1 64.8 40.4 MGA_567 LOCUS_4350 sequence134:881..1033(-) internal_stop_codon 704..706(-),713..715(-),881..883(-),755..757(-) WP_001199945.1 leucine--tRNA ligase 92.0 5.3 78.3 MGA_574 LOCUS_4390 sequence137:280..573(+) internal_stop_codon 571..573(+) WP_010932485.1 transketolase family protein 83.5 24.8 54.3 MGA_575 LOCUS_4400 sequence137:619..942(+) internal_stop_codon 940..942(+),571..573(+) WP_011462197.1 transketolase family protein 68.2 23.5 49.3 MGA_584 LOCUS_4440 sequence140:70..309(+) internal_stop_codon 412..414(+),58..60(+),385..387(+),307..309(+) WP_011962647.1 BRO family protein 100.0 27.5 55.7 MGA_585 LOCUS_4450 sequence140:427..867(+) internal_stop_codon 412..414(+),385..387(+),307..309(+) WP_016475763.1 BRO family protein 86.3 42.5 44.4 MGA_593 LOCUS_4500 sequence143:1..779(+) internal_stop_codon 924..926(+),777..779(+),792..794(+) WP_004522572.1 leucyl aminopeptidase 89.9 46.3 46.8 MGA_595 LOCUS_4510 sequence144:134..1087(+) internal_stop_codon 104..106(+) WP_011142923.1 penicillin-binding protein 2 99.4 51.9 33.8 MGA_600 LOCUS_4540 sequence146:73..579(-) internal_stop_codon 580..582(-),73..75(-) WP_003438222.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD 77.4 50.2 47.0 MGA_601 LOCUS_4550 sequence146:580..819(-) internal_stop_codon 580..582(-) WP_012583884.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD 78.5 25.3 46.8 MGA_604 LOCUS_4570 sequence147:670..822(-) internal_stop_codon 829..831(-),826..828(-),997..999(-) WP_011022068.1 exodeoxyribonuclease III 100.0 19.2 48.0 MGA_607 LOCUS_4590 sequence148:282..1085(+) partial WP_010947342.1 ABC transporter ATP-binding protein 92.1 41.3 56.1 MGA_609 LOCUS_4610 sequence149:653..844(+) internal_stop_codon 935..937(+),842..844(+),896..898(+) WP_002986629.1 50S ribosomal protein L6 100.0 36.0 43.8 MGA_612 LOCUS_4630 sequence150:775..936(+) internal_stop_codon 934..936(+),721..723(+) WP_011403791.1 30S ribosomal protein S7 100.0 34.4 61.1 MGA_613 LOCUS_4640 sequence150:973..1095(+) internal_stop_codon 934..936(+),721..723(+) WP_004597175.1 30S ribosomal protein S7 100.0 25.0 75.0 MGA_614 LOCUS_4650 sequence151:277..>1172(-) internal_stop_codon 277..279(-) WP_012546178.1 transcription termination factor NusA 98.7 74.2 38.9 MGA_619 LOCUS_4670 sequence153:212..>1160(-) internal_stop_codon 212..214(-) WP_012869758.1 excinuclease ABC subunit UvrC 98.7 65.3 30.4 MGA_620 LOCUS_4680 sequence154:240..>1157(-) partial WP_011203101.1 TaqI-like C-terminal specificity domain-containing protein 99.3 25.9 37.8 MGA_630 LOCUS_4730 sequence159:71..934(+) internal_stop_codon 932..934(+) WP_003385808.1 ribonuclease J 83.3 41.8 28.0 MGA_641 LOCUS_4760 sequence164:456..>1091(-) partial WP_011166293.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD 92.9 58.9 42.9 MGA_653 LOCUS_4840 sequence168:179..565(-) internal_stop_codon 179..181(-) WP_011707700.1 DNA-directed RNA polymerase subunit beta' 93.0 8.3 41.2 MGA_657 LOCUS_4860 sequence169:619..786(-) internal_stop_codon 799..801(-) WP_010947360.1 phosphatase PAP2-related protein 100.0 25.2 43.6 MGA_661 LOCUS_4880 sequence171:399..788(+) internal_stop_codon 378..380(+),387..389(+) WP_010883201.1 single-stranded-DNA-specific exonuclease RecJ 93.0 20.6 36.4 MGA_663 LOCUS_4890 sequence172:117..902(+) internal_stop_codon 57..59(+) WP_003429290.1 ParB/RepB/Spo0J family partition protein 91.6 80.5 40.7 MGA_668 LOCUS_4920 sequence174:592..876(+) internal_stop_codon 580..582(+) WP_211204934.1 site-specific DNA-methyltransferase 78.7 14.4 62.2 MGA_670 LOCUS_4930 sequence175:1..546(+) internal_stop_codon 544..546(+) WP_005902269.1 ABC transporter substrate-binding protein 98.3 47.0 31.5 MGA_673 LOCUS_4940 sequence176:378..938(+) partial WP_003020716.1 carbohydrate kinase family protein 94.6 54.9 26.3 MGA_675 LOCUS_4950 sequence177:1..531(+) internal_stop_codon 529..531(+),808..810(+) WP_012048436.1 NAD(P)/FAD-dependent oxidoreductase 80.7 34.5 35.7 MGA_676 LOCUS_4960 sequence177:532..810(+) internal_stop_codon 529..531(+),808..810(+) WP_011986386.1 NAD(P)/FAD-dependent oxidoreductase 96.7 21.9 32.6 MGA_677 LOCUS_4970 sequence178:178..807(-) internal_stop_codon 148..150(-),178..180(-),871..873(-),832..834(-) WP_052846363.1 thioredoxin-disulfide reductase 99.0 62.5 36.8