{
    "type": "genome",
    "identifier": "GCA_026626905.1",
    "organism": "Desulfurococcus sp.",
    "title": "Desulfurococcus sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Rutgers University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026626905.1",
        "bioproject": "PRJNA889931",
        "biosample": "SAMN31719902",
        "wgs_master": "JAPNUX000000000.1",
        "refseq_category": "na",
        "taxid": "51678",
        "species_taxid": "51678",
        "organism_name": "Desulfurococcus sp.",
        "infraspecific_name": "",
        "isolate": "CF.Pisc.bin.12",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/04",
        "asm_name": "ASM2662690v1",
        "submitter": "Rutgers University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/626/905/GCA_026626905.1_ASM2662690v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-04",
    "dateModified": "2022-12-04",
    "datePublished": "2022-12-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Desulfurococcus sp."
        ],
        "sample_taxid": [
            "51678"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Italy: Naples, Campi Flegrei, Pisciarelli hydrothermal system"
        ],
        "sample_host_location_id": [],
        "data_size": "0.361 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1272001",
        "Number of Sequences": "8",
        "Longest Sequences (bp)": "341757",
        "N50 (bp)": "189743",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "46.8",
        "Number of CDSs": "1356",
        "Average Protein Length": "278.0",
        "Coding Ratio (%)": "88.9",
        "Number of rRNAs": "2",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Desulfurococcus mucosus",
                "strain": "strain=DSM 2162",
                "accession": "GCA_000186365.1",
                "taxid": 2275,
                "species_taxid": 2275,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4899,
                "matched_fragments": 70,
                "total_fragments": 419,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000186365.1",
                "gtdb_species": "s__Desulfurococcus mucosus",
                "ani": 77.5307,
                "matched_fragments": 69,
                "total_fragments": 419,
                "gtdb_taxonomy": "d__Archaea;p__Thermoproteota;c__Thermoproteia;o__Sulfolobales;f__Desulfurococcaceae;g__Desulfurococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.75",
                "min_intra_species_ani": "99.75",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.0,
        "cell_length": 0.0,
        "doubling_h": null,
        "growth_tmp": 81.0,
        "optimum_tmp": 83.571,
        "optimum_ph": 6.25,
        "genome_size": 1368526.818,
        "gc_content": 45.05,
        "coding_genes": 1417.167,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 46.5,
        "gram_stain": 0.0,
        "sporulation": null,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 0.0,
        "thermophilic_range_tmp": 1.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Archaea",
        "p__Thermoproteota",
        "c__Thermoprotei_A",
        "o__Sulfolobales",
        "f__Desulfurococcaceae",
        "g__Desulfurococcus",
        "s__Desulfurococcus sp026626905"
    ],
    "_genome_taxon": [
        "Desulfurococcus",
        "sp.",
        "d__Archaea",
        "p__Thermoproteota",
        "c__Thermoprotei_A",
        "o__Sulfolobales",
        "f__Desulfurococcaceae",
        "g__Desulfurococcus",
        "s__Desulfurococcus sp026626905",
        "Archaea",
        "Thermoproteota",
        "Thermoprotei",
        "A",
        "Sulfolobales",
        "Desulfurococcaceae",
        "Desulfurococcus",
        "Desulfurococcus",
        "sp026626905"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}