{ "type": "genome", "identifier": "GCA_026645595.1", "organism": "Alloalcanivorax xenomutans", "title": "Alloalcanivorax xenomutans", "description": "derived from metagenome; incomplete metagenome", "data type": "Genome sequencing and assembly", "organization": "Stazione Zoologica Anton Dohrn", "publication": [ {} ], "properties": { "assembly_accession": "GCA_026645595.1", "bioproject": "PRJNA899357", "biosample": "SAMN31654591", "wgs_master": "JAPHNE000000000.1", "refseq_category": "na", "taxid": "1094342", "species_taxid": "1094342", "organism_name": "Alloalcanivorax xenomutans", "infraspecific_name": "", "isolate": "MAG2", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/05", "asm_name": "ASM2664559v1", "submitter": "Stazione Zoologica Anton Dohrn", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/645/595/GCA_026645595.1_ASM2664559v1", "excluded_from_refseq": "derived from metagenome; incomplete metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-05", "dateModified": "2022-12-05", "datePublished": "2022-12-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Alloalcanivorax xenomutans" ], "sample_taxid": [ "1094342" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Italy: Gulf of Naples" ], "sample_host_location_id": [], "data_size": "1.091 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 80.56, "contamination": 1.04, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3877966", "Number of Sequences": "56", "Longest Sequences (bp)": "374810", "N50 (bp)": "264015", "Gap Ratio (%)": "0.000387", "GCcontent (%)": "61.5", "Number of CDSs": "3519", "Average Protein Length": "326.0", "Coding Ratio (%)": "88.7", "Number of rRNAs": "1", "Number of tRNAs": "36", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Alcanivorax xenomutans", "strain": "strain=JC109", "accession": "GCA_900217905.1", "taxid": 1094342, "species_taxid": 1094342, "relation_to_type": "type", "validated": true, "ani": 98.5431, "matched_fragments": 1153, "total_fragments": 1263, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Alcanivorax balearicus", "strain": "strain=MACL04", "accession": "GCA_025532145.1", "taxid": 413232, "species_taxid": 413232, "relation_to_type": "type", "validated": true, "ani": 94.6449, "matched_fragments": 1135, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax dieselolei", "strain": "strain=CGMCC 1.3690", "accession": "GCA_014644575.1", "taxid": 285091, "species_taxid": 285091, "relation_to_type": "type", "validated": true, "ani": 93.683, "matched_fragments": 1126, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax dieselolei", "strain": "strain=B5", "accession": "GCA_000300005.1", "taxid": 285091, "species_taxid": 285091, "relation_to_type": "type", "validated": true, "ani": 93.6813, "matched_fragments": 1131, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax marinus", "strain": "strain=R8-12", "accession": "GCA_025532125.1", "taxid": 1177169, "species_taxid": 1177169, "relation_to_type": "type", "validated": true, "ani": 80.6781, "matched_fragments": 560, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax profundimaris", "strain": "strain=ST75FaO-1", "accession": "GCA_015265435.1", "taxid": 2735259, "species_taxid": 2735259, "relation_to_type": "type", "validated": true, "ani": 80.6692, "matched_fragments": 608, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_024448505.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 76.7446, "matched_fragments": 137, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=FDAARGOS_876", "accession": "GCA_016028635.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "suspected-type", "validated": true, "ani": 76.726, "matched_fragments": 136, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_002891015.1", "taxid": 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