{
    "type": "genome",
    "identifier": "GCA_026705225.1",
    "organism": "Rhodospirillales bacterium",
    "title": "Rhodospirillales bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Australian Centre for Ecogenomics",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026705225.1",
        "bioproject": "PRJNA602572",
        "biosample": "SAMN15855244",
        "wgs_master": "JAPPBC000000000.1",
        "refseq_category": "na",
        "taxid": "2026786",
        "species_taxid": "2026786",
        "organism_name": "Rhodospirillales bacterium",
        "infraspecific_name": "",
        "isolate": "IRC2_bin_15",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/06",
        "asm_name": "ASM2670522v1",
        "submitter": "Australian Centre for Ecogenomics",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/705/225/GCA_026705225.1_ASM2670522v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-06",
    "dateModified": "2022-12-06",
    "datePublished": "2022-12-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Rhodospirillales bacterium"
        ],
        "sample_taxid": [
            "2026786"
        ],
        "sample_host_organism": [
            "Ircinia ramosa"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Davies Reef"
        ],
        "sample_host_location_id": [],
        "data_size": "0.721 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 82.58,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2532020",
        "Number of Sequences": "577",
        "Longest Sequences (bp)": "25280",
        "N50 (bp)": "4884",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "66.1",
        "Number of CDSs": "1911",
        "Average Protein Length": "284.3",
        "Coding Ratio (%)": "64.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "30",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Tistlia consotensis",
                "strain": "strain=USBA 355",
                "accession": "GCA_900177295.1",
                "taxid": 1321365,
                "species_taxid": 1321365,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5381,
                "matched_fragments": 76,
                "total_fragments": 502,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tistlia consotensis",
                "strain": "strain=DSM 21585",
                "accession": "GCA_900188055.1",
                "taxid": 1321365,
                "species_taxid": 1321365,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5234,
                "matched_fragments": 77,
                "total_fragments": 502,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 82.58,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_009839325.1",
                "gtdb_species": "s__VXPW01 sp009839325",
                "ani": 98.2097,
                "matched_fragments": 392,
                "total_fragments": 502,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__VXPW01;f__VXPW01;g__VXPW01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.26",
                "min_intra_species_ani": "99.26",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCF_900177295.1",
                "gtdb_species": "s__Tistlia consotensis",
                "ani": 75.5234,
                "matched_fragments": 77,
                "total_fragments": 502,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Kiloniellales;f__DSM-21159;g__Tistlia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.149,
        "cell_length": 0.277,
        "doubling_h": 0.851,
        "growth_tmp": 29.223,
        "optimum_tmp": 29.873,
        "optimum_ph": 6.714,
        "genome_size": 4309033.9,
        "gc_content": 61.073,
        "coding_genes": 3753.536,
        "rRNA16S_genes": 4.275,
        "tRNA_genes": 58.848,
        "gram_stain": 0.0,
        "sporulation": 0.027,
        "motility": 0.719,
        "range_salinity": 0.444,
        "facultative_respiration": 0.083,
        "anaerobic_respiration": 0.064,
        "aerobic_respiration": 0.852,
        "mesophilic_range_tmp": 0.942,
        "thermophilic_range_tmp": 0.028,
        "psychrophilic_range_tmp": 0.028,
        "bacillus_cell_shape": 0.623,
        "coccus_cell_shape": 0.085,
        "filament_cell_shape": 0.008,
        "coccobacillus_cell_shape": 0.059,
        "vibrio_cell_shape": 0.017,
        "spiral_cell_shape": 0.205
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__VXPW01",
        "f__VXPW01",
        "g__VXPW01",
        "s__VXPW01 sp009839325"
    ],
    "_genome_taxon": [
        "Rhodospirillales",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__VXPW01",
        "f__VXPW01",
        "g__VXPW01",
        "s__VXPW01 sp009839325",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "VXPW01",
        "VXPW01",
        "VXPW01",
        "VXPW01",
        "sp009839325"
    ],
    "_meo": [
        {
            "id": "MEO_0002677",
            "label": "sponge"
        },
        {
            "id": "MEO_0000023",
            "label": "sea"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}