{ "type": "genome", "identifier": "GCA_026705905.1", "organism": "Rhodospirillales bacterium", "title": "Rhodospirillales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Australian Centre for Ecogenomics", "publication": [ {} ], "properties": { "assembly_accession": "GCA_026705905.1", "bioproject": "PRJNA602572", "biosample": "SAMN15855210", "wgs_master": "JAPOZU000000000.1", "refseq_category": "na", "taxid": "2026786", "species_taxid": "2026786", "organism_name": "Rhodospirillales bacterium", "infraspecific_name": "", "isolate": "IRC1_bin_17", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/06", "asm_name": "ASM2670590v1", "submitter": "Australian Centre for Ecogenomics", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/705/905/GCA_026705905.1_ASM2670590v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-06", "dateModified": "2022-12-06", "datePublished": "2022-12-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodospirillales bacterium" ], "sample_taxid": [ "2026786" ], "sample_host_organism": [ "Ircinia ramosa" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Australia: Davies Reef" ], "sample_host_location_id": [], "data_size": "0.873 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3106898", "Number of Sequences": "50", "Longest Sequences (bp)": "388701", "N50 (bp)": "115600", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "64.8", "Number of CDSs": "2860", "Average Protein Length": "306.5", "Coding Ratio (%)": "84.7", "Number of rRNAs": "0", "Number of tRNAs": "42", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Lutibaculum baratangense", "strain": "strain=AMV1", "accession": "GCA_000496075.1", "taxid": 1358440, "species_taxid": 1358440, "relation_to_type": "type", "validated": true, "ani": 75.8126, "matched_fragments": 53, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Minwuia thermotolerans", "strain": "strain=SY3-15", "accession": "GCA_002924445.1", "taxid": 2056226, "species_taxid": 2056226, "relation_to_type": "type", "validated": true, "ani": 75.786, "matched_fragments": 61, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovibrio 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"GCA_900188055.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 75.5857, "matched_fragments": 95, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium frederickii", "strain": "strain=CNPSo 3426", "accession": "GCA_004570865.1", "taxid": 2560054, "species_taxid": 2560054, "relation_to_type": "type", "validated": true, "ani": 75.5564, "matched_fragments": 63, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanibacterium hippocampi", "strain": "strain=CECT 7691", "accession": "GCA_900172325.1", "taxid": 745714, "species_taxid": 745714, "relation_to_type": "type", "validated": true, "ani": 75.4624, "matched_fragments": 65, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum oleiclasticum", "strain": "strain=RWY-5-1-1", "accession": "GCA_013423485.1", "taxid": 2735135, 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