{
    "type": "genome",
    "identifier": "GCA_026706515.1",
    "organism": "Gammaproteobacteria bacterium",
    "title": "Gammaproteobacteria bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Australian Centre for Ecogenomics",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026706515.1",
        "bioproject": "PRJNA602572",
        "biosample": "SAMN15855175",
        "wgs_master": "JAPOYP000000000.1",
        "refseq_category": "na",
        "taxid": "1913989",
        "species_taxid": "1913989",
        "organism_name": "Gammaproteobacteria bacterium",
        "infraspecific_name": "",
        "isolate": "COS4_bin_37",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/06",
        "asm_name": "ASM2670651v1",
        "submitter": "Australian Centre for Ecogenomics",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/706/515/GCA_026706515.1_ASM2670651v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-06",
    "dateModified": "2022-12-06",
    "datePublished": "2022-12-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Gammaproteobacteria bacterium"
        ],
        "sample_taxid": [
            "1913989"
        ],
        "sample_host_organism": [
            "Coscinoderma mathewsi"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Davies Reef"
        ],
        "sample_host_location_id": [],
        "data_size": "0.917 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 80.98,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
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        "Number of Sequences": "728",
        "Longest Sequences (bp)": "17831",
        "N50 (bp)": "4893",
        "Gap Ratio (%)": "0.058084",
        "GCcontent (%)": "64.7",
        "Number of CDSs": "2450",
        "Average Protein Length": "294.8",
        "Coding Ratio (%)": "67.2",
        "Number of rRNAs": "1",
        "Number of tRNAs": "23",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Alcanivorax marinus",
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                "accession": "GCA_025532125.1",
                "taxid": 1177169,
                "species_taxid": 1177169,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 54,
                "total_fragments": 677,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Stutzerimonas azotifigens",
                "strain": "strain=DSM 17556",
                "accession": "GCA_000425625.1",
                "taxid": 291995,
                "species_taxid": 291995,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1707,
                "matched_fragments": 54,
                "total_fragments": 677,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas aromaticivorans",
                "strain": "strain=MAP12",
                "accession": "GCA_019097855.1",
                "taxid": 2849492,
                "species_taxid": 2849492,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1303,
                "matched_fragments": 56,
                "total_fragments": 677,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas lalucatii",
                "strain": "strain=R1b54",
                "accession": "GCA_018398425.1",
                "taxid": 1424203,
                "species_taxid": 1424203,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9804,
                "matched_fragments": 63,
                "total_fragments": 677,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas aeruginosa",
                "strain": "strain=JCM 5962",
                "accession": "GCA_022496575.1",
                "taxid": 287,
                "species_taxid": 287,
                "relation_to_type": "type",
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                "ani": 75.7028,
                "matched_fragments": 53,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "total_fragments": 677,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2168",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.76",
                "min_intra_species_ani": "96.95",
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                "num_clustered_genomes": 7,
                "status": "-"
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            {
                "accession": "GCA_002480525.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
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                "gtdb_species": "s__VXYL01 sp009839505",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__VXYL01",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_014192275.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002348385.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2965",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_004801855.1",
                "gtdb_species": "s__Pseudomonas_K sp004801855",
                "ani": 76.3494,
                "matched_fragments": 63,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_K",
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            },
            {
                "accession": "GCF_002549795.1",
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCF_002879645.1",
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            {
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                "mean_intra_species_ani": "N/A",
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            },
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            },
            {
                "accession": "GCF_000761545.1",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
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        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
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    },
    "_gtdb_taxon": [
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        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
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        "f__Azotimanducaceae_A",
        "g__Azophilus",
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    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
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        "g__Azophilus",
        "s__",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Pseudomonadales",
        "Azotimanducaceae",
        "A",
        "Azophilus",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0002677",
            "label": "sponge"
        },
        {
            "id": "MEO_0000023",
            "label": "sea"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}