{
    "type": "genome",
    "identifier": "GCA_026706735.1",
    "organism": "Nitrospinota bacterium",
    "title": "Nitrospinota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Australian Centre for Ecogenomics",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026706735.1",
        "bioproject": "PRJNA602572",
        "biosample": "SAMN15855161",
        "wgs_master": "JAPOYD000000000.1",
        "refseq_category": "na",
        "taxid": "2026769",
        "species_taxid": "2026769",
        "organism_name": "Nitrospinota bacterium",
        "infraspecific_name": "",
        "isolate": "COS4_bin_23",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/06",
        "asm_name": "ASM2670673v1",
        "submitter": "Australian Centre for Ecogenomics",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/706/735/GCA_026706735.1_ASM2670673v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-06",
    "dateModified": "2022-12-06",
    "datePublished": "2022-12-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Nitrospinota bacterium"
        ],
        "sample_taxid": [
            "2026769"
        ],
        "sample_host_organism": [
            "Coscinoderma mathewsi"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Davies Reef"
        ],
        "sample_host_location_id": [],
        "data_size": "1.079 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3793180",
        "Number of Sequences": "191",
        "Longest Sequences (bp)": "82168",
        "N50 (bp)": "33134",
        "Gap Ratio (%)": "0.010044",
        "GCcontent (%)": "59.9",
        "Number of CDSs": "3393",
        "Average Protein Length": "306.1",
        "Coding Ratio (%)": "82.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Anaeromyxobacter dehalogenans",
                "strain": "strain=2CP-1",
                "accession": "GCA_000022145.1",
                "taxid": 161493,
                "species_taxid": 161493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9871,
                "matched_fragments": 54,
                "total_fragments": 1167,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_011523725.1",
                "gtdb_species": "s__Bin107 sp011523725",
                "ani": 89.6784,
                "matched_fragments": 761,
                "total_fragments": 1167,
                "gtdb_taxonomy": "d__Bacteria;p__UBA8248;c__UBA8248;o__UBA8248;f__UBA8248;g__Bin107",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009839615.1",
                "gtdb_species": "s__Bin107 sp009839615",
                "ani": 89.6137,
                "matched_fragments": 890,
                "total_fragments": 1167,
                "gtdb_taxonomy": "d__Bacteria;p__UBA8248;c__UBA8248;o__UBA8248;f__UBA8248;g__Bin107",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002238965.1",
                "gtdb_species": "s__Bin107 sp002238965",
                "ani": 88.333,
                "matched_fragments": 1053,
                "total_fragments": 1167,
                "gtdb_taxonomy": "d__Bacteria;p__UBA8248;c__UBA8248;o__UBA8248;f__UBA8248;g__Bin107",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016192135.1",
                "gtdb_species": "s__2-12-FULL-69-37 sp016192135",
                "ani": 76.9261,
                "matched_fragments": 195,
                "total_fragments": 1167,
                "gtdb_taxonomy": "d__Bacteria;p__UBA8248;c__UBA8248;o__UBA8248;f__UBA8248;g__2-12-FULL-69-37",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001790955.1",
                "gtdb_species": "s__2-12-FULL-69-37 sp001790955",
                "ani": 76.8733,
                "matched_fragments": 196,
                "total_fragments": 1167,
                "gtdb_taxonomy": "d__Bacteria;p__UBA8248;c__UBA8248;o__UBA8248;f__UBA8248;g__2-12-FULL-69-37",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.54",
                "min_intra_species_ani": "99.54",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__UBA8248",
        "c__UBA8248",
        "o__UBA8248",
        "f__UBA8248",
        "g__Bin107",
        "s__Bin107 sp026706735"
    ],
    "_genome_taxon": [
        "Nitrospinota",
        "bacterium",
        "d__Bacteria",
        "p__UBA8248",
        "c__UBA8248",
        "o__UBA8248",
        "f__UBA8248",
        "g__Bin107",
        "s__Bin107 sp026706735",
        "Bacteria",
        "UBA8248",
        "UBA8248",
        "UBA8248",
        "UBA8248",
        "Bin107",
        "Bin107",
        "sp026706735"
    ],
    "_meo": [
        {
            "id": "MEO_0002677",
            "label": "sponge"
        },
        {
            "id": "MEO_0000023",
            "label": "sea"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}