{
    "type": "genome",
    "identifier": "GCA_026709535.1",
    "organism": "Rhodospirillaceae bacterium",
    "title": "Rhodospirillaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Australian Centre for Ecogenomics",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026709535.1",
        "bioproject": "PRJNA602572",
        "biosample": "SAMN15855014",
        "wgs_master": "JAPOST000000000.1",
        "refseq_category": "na",
        "taxid": "1898112",
        "species_taxid": "1898112",
        "organism_name": "Rhodospirillaceae bacterium",
        "infraspecific_name": "",
        "isolate": "CAR2_bin_5",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/06",
        "asm_name": "ASM2670953v1",
        "submitter": "Australian Centre for Ecogenomics",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/709/535/GCA_026709535.1_ASM2670953v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-06",
    "dateModified": "2022-12-06",
    "datePublished": "2022-12-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Rhodospirillaceae bacterium"
        ],
        "sample_taxid": [
            "1898112"
        ],
        "sample_host_organism": [
            "Carteriospongia foliascens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Davies Reef"
        ],
        "sample_host_location_id": [],
        "data_size": "1.051 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3671940",
        "Number of Sequences": "203",
        "Longest Sequences (bp)": "82544",
        "N50 (bp)": "29039",
        "Gap Ratio (%)": "0.149594",
        "GCcontent (%)": "58.6",
        "Number of CDSs": "3306",
        "Average Protein Length": "297.3",
        "Coding Ratio (%)": "80.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Oceanibaculum indicum",
                "strain": "strain=P24",
                "accession": "GCA_000299935.1",
                "taxid": 526216,
                "species_taxid": 526216,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9925,
                "matched_fragments": 59,
                "total_fragments": 1122,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum humicireducens",
                "strain": "strain=SgZ-5",
                "accession": "GCA_001639105.2",
                "taxid": 1226968,
                "species_taxid": 1226968,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7156,
                "matched_fragments": 52,
                "total_fragments": 1122,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Stella humosa",
                "strain": "strain=ATCC 43930",
                "accession": "GCA_006738645.1",
                "taxid": 94,
                "species_taxid": 94,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7079,
                "matched_fragments": 50,
                "total_fragments": 1122,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseiarcus fermentans",
                "strain": "strain=DSM 24875",
                "accession": "GCA_003315135.1",
                "taxid": 1473586,
                "species_taxid": 1473586,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2411,
                "matched_fragments": 51,
                "total_fragments": 1122,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_009840595.1",
                "gtdb_species": "s__Bin65 sp009840595",
                "ani": 77.3768,
                "matched_fragments": 261,
                "total_fragments": 1122,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Bin65;f__Bin65;g__Bin65",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.91",
                "min_intra_species_ani": "96.90",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_900197615.1",
                "gtdb_species": "s__Bin65 sp900197615",
                "ani": 77.0475,
                "matched_fragments": 249,
                "total_fragments": 1122,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Bin65;f__Bin65;g__Bin65",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011523655.1",
                "gtdb_species": "s__Bin65 sp011523655",
                "ani": 77.0058,
                "matched_fragments": 276,
                "total_fragments": 1122,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Bin65;f__Bin65;g__Bin65",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.25",
                "min_intra_species_ani": "95.16",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_002238725.1",
                "gtdb_species": "s__Bin65 sp002238725",
                "ani": 77.001,
                "matched_fragments": 255,
                "total_fragments": 1122,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Bin65;f__Bin65;g__Bin65",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000299935.1",
                "gtdb_species": "s__Oceanibaculum indicum",
                "ani": 75.9925,
                "matched_fragments": 59,
                "total_fragments": 1122,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Oceanibaculales;f__Oceanibaculaceae;g__Oceanibaculum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.37",
                "min_intra_species_ani": "97.37",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_001639105.2",
                "gtdb_species": "s__Azospirillum humicireducens",
                "ani": 75.7156,
                "matched_fragments": 52,
                "total_fragments": 1122,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Azospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016869645.1",
                "gtdb_species": "s__SHVW01 sp016869645",
                "ani": 75.5503,
                "matched_fragments": 51,
                "total_fragments": 1122,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__SHVW01;f__SHVW01;g__SHVW01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.124,
        "cell_length": 0.412,
        "doubling_h": 0.931,
        "growth_tmp": 29.068,
        "optimum_tmp": 30.167,
        "optimum_ph": 7.012,
        "genome_size": 4958622.479,
        "gc_content": 62.84,
        "coding_genes": 4573.287,
        "rRNA16S_genes": 4.82,
        "tRNA_genes": 64.75,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.839,
        "range_salinity": 0.666,
        "facultative_respiration": 0.174,
        "anaerobic_respiration": 0.158,
        "aerobic_respiration": 0.666,
        "mesophilic_range_tmp": 0.916,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.083,
        "bacillus_cell_shape": 0.509,
        "coccus_cell_shape": 0.018,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.036,
        "spiral_cell_shape": 0.436
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Bin65",
        "f__Bin65",
        "g__Bin65",
        "s__Bin65 sp026709535"
    ],
    "_genome_taxon": [
        "Rhodospirillaceae",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Bin65",
        "f__Bin65",
        "g__Bin65",
        "s__Bin65 sp026709535",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Bin65",
        "Bin65",
        "Bin65",
        "Bin65",
        "sp026709535"
    ],
    "_meo": [
        {
            "id": "MEO_0002677",
            "label": "sponge"
        },
        {
            "id": "MEO_0000023",
            "label": "sea"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}