{ "type": "genome", "identifier": "GCA_026786145.1", "organism": "Spirochaetaceae bacterium", "title": "Spirochaetaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "University of Colorado at Boulder", "publication": [ {} ], "properties": { "assembly_accession": "GCA_026786145.1", "bioproject": "PRJNA764737", "biosample": "SAMN22183898", "wgs_master": "JAJAYQ000000000.1", "refseq_category": "na", "taxid": "1898206", "species_taxid": "1898206", "organism_name": "Spirochaetaceae bacterium", "infraspecific_name": "", "isolate": "CAN_BIN15", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/09", "asm_name": "ASM2678614v1", "submitter": "University of Colorado at Boulder", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/786/145/GCA_026786145.1_ASM2678614v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-09", "dateModified": "2022-12-09", "datePublished": "2022-12-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Spirochaetaceae bacterium" ], "sample_taxid": [ "1898206" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Antarctica: Taylor Valley, Canada Glacier" ], "sample_host_location_id": [], "data_size": "0.602 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 42.71, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2225103", "Number of Sequences": "264", "Longest Sequences (bp)": "44554", "N50 (bp)": "13374", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "71.3", "Number of CDSs": "1970", "Average Protein Length": "302.8", "Coding Ratio (%)": "80.4", "Number of rRNAs": "1", "Number of tRNAs": "32", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Nocardioides okcheonensis", "strain": "strain=MMS20-HV4-12", "accession": "GCA_020991065.1", "taxid": 2894081, "species_taxid": 2894081, "relation_to_type": "type", "validated": true, "ani": 77.1167, "matched_fragments": 208, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella alba", "strain": "strain=YIM 61503", "accession": "GCA_001708125.1", "taxid": 561176, "species_taxid": 561176, "relation_to_type": "type", "validated": true, "ani": 77.0314, "matched_fragments": 239, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Janibacter melonis", "strain": "strain=NBRC107855", "accession": "GCA_020567375.1", "taxid": 262209, "species_taxid": 262209, "relation_to_type": "type", "validated": true, "ani": 76.99, "matched_fragments": 179, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella alba", "strain": "strain=DSM 45237", "accession": "GCA_900106035.1", "taxid": 561176, "species_taxid": 561176, "relation_to_type": "type", "validated": true, "ani": 76.9883, "matched_fragments": 243, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella muralis", "strain": "strain=DSM 45357", "accession": "GCA_001270745.1", "taxid": 702383, "species_taxid": 702383, "relation_to_type": "type", "validated": true, "ani": 76.912, "matched_fragments": 223, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces glomeratus", "strain": "strain=DSM 41457", "accession": "GCA_021462825.1", 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76.6062, "matched_fragments": 204, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces vinaceus", "strain": "strain=JCM 4849", "accession": "GCA_014656155.1", "taxid": 1960, "species_taxid": 1960, "relation_to_type": "type", "validated": true, "ani": 76.5807, "matched_fragments": 203, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Haloactinopolyspora alba", "strain": "strain=DSM 45211", "accession": "GCA_003014555.1", "taxid": 648780, "species_taxid": 648780, "relation_to_type": "type", "validated": true, "ani": 76.4968, "matched_fragments": 190, "total_fragments": 612, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Haloactinopolyspora alba", "strain": "strain=YIM 93246", "accession": "GCA_004138525.1", "taxid": 648780, "species_taxid": 648780, "relation_to_type": "type", "validated": true, "ani": 76.4782, "matched_fragments": 192, "total_fragments": 612, 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