{
    "type": "genome",
    "identifier": "GCA_026982575.1",
    "organism": "Paracoccaceae bacterium",
    "title": "Paracoccaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Portland State University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026982575.1",
        "bioproject": "PRJNA821212",
        "biosample": "SAMN27357667",
        "wgs_master": "JALSGU000000000.1",
        "refseq_category": "na",
        "taxid": "1904441",
        "species_taxid": "1904441",
        "organism_name": "Paracoccaceae bacterium",
        "infraspecific_name": "",
        "isolate": "354-166_maxbin2_scaf2bin.140",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/19",
        "asm_name": "ASM2698257v1",
        "submitter": "Portland State University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/982/575/GCA_026982575.1_ASM2698257v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-19",
    "dateModified": "2022-12-19",
    "datePublished": "2022-12-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Paracoccaceae bacterium"
        ],
        "sample_taxid": [
            "1904441"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Atlantic Ocean: Mid Atlantic Ridge"
        ],
        "sample_host_location_id": [],
        "data_size": "0.672 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 4.63,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2378300",
        "Number of Sequences": "397",
        "Longest Sequences (bp)": "45126",
        "N50 (bp)": "12257",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "52.9",
        "Number of CDSs": "2041",
        "Average Protein Length": "295.0",
        "Coding Ratio (%)": "75.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Pseudorhodobacter ferrugineus",
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                "accession": "GCA_000420745.1",
                "taxid": 77008,
                "species_taxid": 77008,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 59,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseinatronobacter thiooxidans",
                "strain": "strain=ALG1",
                "accession": "GCA_001870675.1",
                "taxid": 121821,
                "species_taxid": 121821,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7364,
                "matched_fragments": 64,
                "total_fragments": 595,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseinatronobacter thiooxidans",
                "strain": "strain=DSM 13087",
                "accession": "GCA_003254005.1",
                "taxid": 121821,
                "species_taxid": 121821,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7176,
                "matched_fragments": 65,
                "total_fragments": 595,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tabrizicola alkalilacus",
                "strain": "strain=DJC",
                "accession": "GCA_003443995.1",
                "taxid": 2305252,
                "species_taxid": 2305252,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6149,
                "matched_fragments": 51,
                "total_fragments": 595,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.63,
            "strain_heterogeneity": 100.0
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        "gtdb_result": [
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                "gtdb_species": "s__UBA3077 sp003228875",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA3077",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
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            {
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA3077",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_015485015.1",
                "gtdb_species": "s__UBA3077 sp015485015",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA3077",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_015487255.1",
                "gtdb_species": "s__UBA3077 sp015487255",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA3077",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCA_002366685.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_002732995.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_016744015.1",
                "gtdb_species": "s__UBA3077 sp016744015",
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                "matched_fragments": 151,
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            },
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            },
            {
                "accession": "GCF_900182725.1",
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            {
                "accession": "GCA_016764475.1",
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            },
            {
                "accession": "GCA_002748285.1",
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            },
            {
                "accession": "GCA_002732955.1",
                "gtdb_species": "s__NORP110 sp002732955",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Rhodobacterales",
        "f__Rhodobacteraceae",
        "g__UBA3077",
        "s__UBA3077 sp026982575"
    ],
    "_genome_taxon": [
        "Paracoccaceae",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Rhodobacterales",
        "f__Rhodobacteraceae",
        "g__UBA3077",
        "s__UBA3077 sp026982575",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Rhodobacterales",
        "Rhodobacteraceae",
        "UBA3077",
        "UBA3077",
        "sp026982575"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}