{
    "type": "genome",
    "identifier": "GCA_026989575.1",
    "organism": "Marinosulfonomonas sp.",
    "title": "Marinosulfonomonas sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Portland State University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026989575.1",
        "bioproject": "PRJNA821212",
        "biosample": "SAMN27357724",
        "wgs_master": "JALSIZ000000000.1",
        "refseq_category": "na",
        "taxid": "2030815",
        "species_taxid": "2030815",
        "organism_name": "Marinosulfonomonas sp.",
        "infraspecific_name": "",
        "isolate": "354-166_metabat2_scaf2bin.060",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/19",
        "asm_name": "ASM2698957v1",
        "submitter": "Portland State University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/989/575/GCA_026989575.1_ASM2698957v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-19",
    "dateModified": "2022-12-19",
    "datePublished": "2022-12-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Marinosulfonomonas sp."
        ],
        "sample_taxid": [
            "2030815"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Atlantic Ocean: Mid Atlantic Ridge"
        ],
        "sample_host_location_id": [],
        "data_size": "0.945 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 94.44,
        "contamination": 22.32,
        "strain_heterogeneity": 42.86,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3333943",
        "Number of Sequences": "749",
        "Longest Sequences (bp)": "20155",
        "N50 (bp)": "5203",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "58.0",
        "Number of CDSs": "2720",
        "Average Protein Length": "271.1",
        "Coding Ratio (%)": "66.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Profundibacter amoris",
                "strain": "strain=BAR1",
                "accession": "GCA_003544895.1",
                "taxid": 2171755,
                "species_taxid": 2171755,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.6163,
                "matched_fragments": 625,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Pseudosulfitobacter pseudonitzschiae",
                "strain": "strain=H3",
                "accession": "GCA_000712315.1",
                "taxid": 1402135,
                "species_taxid": 1402135,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6791,
                "matched_fragments": 222,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thalassobius mangrovi",
                "strain": "strain=GS-10",
                "accession": "GCA_009857745.1",
                "taxid": 2692236,
                "species_taxid": 2692236,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5802,
                "matched_fragments": 231,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thalassobius mediterraneus",
                "strain": "strain=DSM 16398",
                "accession": "GCA_900156595.1",
                "taxid": 340021,
                "species_taxid": 340021,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4234,
                "matched_fragments": 163,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actibacterium pelagium",
                "strain": "strain=JN33",
                "accession": "GCA_002285415.1",
                "taxid": 2029103,
                "species_taxid": 2029103,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3754,
                "matched_fragments": 125,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actibacterium pelagium",
                "strain": "strain=CGMCC 1.16012",
                "accession": "GCA_014644355.1",
                "taxid": 2029103,
                "species_taxid": 2029103,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3515,
                "matched_fragments": 121,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aestuariivita boseongensis",
                "strain": "strain=BS-B2",
                "accession": "GCA_001262635.1",
                "taxid": 1470562,
                "species_taxid": 1470562,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2768,
                "matched_fragments": 180,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovulum adriaticum",
                "strain": "strain=DSM 2781",
                "accession": "GCA_004345735.1",
                "taxid": 35804,
                "species_taxid": 35804,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2699,
                "matched_fragments": 177,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovulum adriaticum",
                "strain": "strain=DSM 2781",
                "accession": "GCA_016583705.1",
                "taxid": 35804,
                "species_taxid": 35804,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2687,
                "matched_fragments": 178,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Litoreibacter arenae",
                "strain": "strain=DSM 19593",
                "accession": "GCA_000442275.2",
                "taxid": 491388,
                "species_taxid": 491388,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2497,
                "matched_fragments": 152,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thalassobius aquimarinus",
                "strain": "strain=KMM 8518",
                "accession": "GCA_018219815.1",
                "taxid": 2785917,
                "species_taxid": 2785917,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2146,
                "matched_fragments": 224,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovulum marinum",
                "strain": "strain=DSM 18063",
                "accession": "GCA_004343075.1",
                "taxid": 320662,
                "species_taxid": 320662,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1287,
                "matched_fragments": 175,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gemmobacter fulva",
                "strain": "strain=con5",
                "accession": "GCA_018798885.1",
                "taxid": 2840474,
                "species_taxid": 2840474,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1049,
                "matched_fragments": 198,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudoprimorskyibacter insulae",
                "strain": "strain=CECT 8871",
                "accession": "GCA_900302505.1",
                "taxid": 1695997,
                "species_taxid": 1695997,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0469,
                "matched_fragments": 169,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovulum visakhapatnamense",
                "strain": "strain=JA181",
                "accession": "GCA_004365965.1",
                "taxid": 364297,
                "species_taxid": 364297,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9252,
                "matched_fragments": 171,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gemmobacter lutimaris",
                "strain": "strain=YJ-T1-11",
                "accession": "GCA_003570715.1",
                "taxid": 2306023,
                "species_taxid": 2306023,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8925,
                "matched_fragments": 180,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovulum euryhalinum",
                "strain": "strain=DSM 4868",
                "accession": "GCA_004342445.1",
                "taxid": 35805,
                "species_taxid": 35805,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.849,
                "matched_fragments": 153,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovulum robiginosum",
                "strain": "strain=DSM 12329",
                "accession": "GCA_003944755.1",
                "taxid": 68292,
                "species_taxid": 68292,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8322,
                "matched_fragments": 182,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aliiroseovarius halocynthiae",
                "strain": "strain=MA1-10",
                "accession": "GCA_007004645.1",
                "taxid": 985055,
                "species_taxid": 985055,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7793,
                "matched_fragments": 131,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paracoccus versutus",
                "strain": "strain=DSM 582",
                "accession": "GCA_000763885.1",
                "taxid": 34007,
                "species_taxid": 34007,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6244,
                "matched_fragments": 145,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aliishimia ponticola",
                "strain": "strain=MYP11",
                "accession": "GCA_004803475.1",
                "taxid": 2499833,
                "species_taxid": 2499833,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6011,
                "matched_fragments": 152,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Salipiger bermudensis",
                "strain": "strain=HTCC2601",
                "accession": "GCA_000153725.1",
                "taxid": 344736,
                "species_taxid": 344736,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5569,
                "matched_fragments": 139,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 94.44,
            "contamination": 22.32,
            "strain_heterogeneity": 42.86
        },
        "gtdb_result": [
            {
                "accession": "GCF_003544895.1",
                "gtdb_species": "s__Profundibacter amoris",
                "ani": 95.5823,
                "matched_fragments": 626,
                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Profundibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_015494385.1",
                "gtdb_species": "s__Profundibacter sp015494385",
                "ani": 89.7602,
                "matched_fragments": 488,
                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Profundibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015488685.1",
                "gtdb_species": "s__Profundibacter sp015488685",
                "ani": 88.9546,
                "matched_fragments": 574,
                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Profundibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002732995.1",
                "gtdb_species": "s__Profundibacter sp002732995",
                "ani": 80.4856,
                "matched_fragments": 366,
                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Profundibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002352425.1",
                "gtdb_species": "s__Profundibacter sp002352425",
                "ani": 78.5179,
                "matched_fragments": 316,
                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Profundibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002748285.1",
                "gtdb_species": "s__Profundibacter sp002748285",
                "ani": 78.3271,
                "matched_fragments": 271,
                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Profundibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004343075.1",
                "gtdb_species": "s__Rhodovulum marinum",
                "ani": 77.1266,
                "matched_fragments": 176,
                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodovulum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_017743735.1",
                "gtdb_species": "s__Shimia sp017743735",
                "ani": 76.8493,
                "matched_fragments": 133,
                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Shimia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.87",
                "min_intra_species_ani": "95.63",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Rhodobacterales",
        "f__Rhodobacteraceae",
        "g__Profundibacter",
        "s__Profundibacter amoris"
    ],
    "_genome_taxon": [
        "Marinosulfonomonas",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Rhodobacterales",
        "f__Rhodobacteraceae",
        "g__Profundibacter",
        "s__Profundibacter amoris",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Rhodobacterales",
        "Rhodobacteraceae",
        "Profundibacter",
        "Profundibacter",
        "amoris"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}