{ "type": "genome", "identifier": "GCA_026992495.1", "organism": "Flavobacteriaceae bacterium", "title": "Flavobacteriaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Portland State University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_026992495.1", "bioproject": "PRJNA821212", "biosample": "SAMN27361147", "wgs_master": "JALXAD000000000.1", "refseq_category": "na", "taxid": "1871037", "species_taxid": "1871037", "organism_name": "Flavobacteriaceae bacterium", "infraspecific_name": "", "isolate": "T2_metabat1_scaf2bin.232", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/19", "asm_name": "ASM2699249v1", "submitter": "Portland State University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/992/495/GCA_026992495.1_ASM2699249v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-19", "dateModified": "2022-12-19", "datePublished": "2022-12-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Flavobacteriaceae bacterium" ], "sample_taxid": [ "1871037" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Pacific Ocean: Lau Basin" ], "sample_host_location_id": [], "data_size": "0.959 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 89.24, "contamination": 0.38, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3346622", "Number of Sequences": "797", "Longest Sequences (bp)": "21827", "N50 (bp)": "5109", "Gap Ratio (%)": "0.005677", "GCcontent (%)": "35.6", "Number of CDSs": "2318", "Average Protein Length": "291.6", "Coding Ratio (%)": "60.6", "Number of rRNAs": "2", "Number of tRNAs": "24", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Aureibaculum algae", "strain": "strain=10Alg 115", "accession": "GCA_006065315.1", "taxid": 2584122, "species_taxid": 2584122, "relation_to_type": "type", "validated": true, "ani": 76.8749, "matched_fragments": 96, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aureibaculum luteum", "strain": "strain=SM1352", "accession": "GCA_003449015.1", "taxid": 1548456, "species_taxid": 1548456, "relation_to_type": "type", "validated": true, "ani": 76.833, "matched_fragments": 102, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aureibaculum flavum", "strain": "strain=A20", "accession": "GCA_016406085.1", "taxid": 2795986, "species_taxid": 2795986, "relation_to_type": "type", "validated": true, "ani": 76.6969, "matched_fragments": 99, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lutibacter flavus", "strain": "strain=DSM 27993", "accession": "GCA_900188355.1", "taxid": 691689, "species_taxid": 691689, "relation_to_type": "type", "validated": true, "ani": 76.3948, "matched_fragments": 64, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tenacibaculum haliotis", "strain": "strain=KCTC 52419", "accession": "GCA_025215075.1", "taxid": 1888914, "species_taxid": 1888914, "relation_to_type": "type", "validated": true, "ani": 76.2986, "matched_fragments": 51, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lutibacter profundi", "strain": "strain=LP1", "accession": "GCA_001543325.1", "taxid": 1622118, "species_taxid": 1622118, "relation_to_type": "type", "validated": true, "ani": 76.2602, "matched_fragments": 89, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polaribacter reichenbachii", "strain": "strain=KCTC 23969", "accession": "GCA_001680875.1", "taxid": 996801, "species_taxid": 996801, "relation_to_type": "type", "validated": true, "ani": 76.0942, "matched_fragments": 59, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polaribacter aestuariivivens", "strain": "strain=DBTF-3", "accession": "GCA_005885675.1", "taxid": 2304626, "species_taxid": 2304626, "relation_to_type": "type", "validated": true, "ani": 76.0846, "matched_fragments": 51, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lutibacter maritimus", "strain": "strain=DSM 24450", "accession": "GCA_900116115.1", "taxid": 593133, "species_taxid": 593133, "relation_to_type": "type", "validated": true, "ani": 76.0676, "matched_fragments": 70, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polaribacter aquimarinus", "strain": "strain=ZY113", "accession": "GCA_003129485.1", "taxid": 2100726, "species_taxid": 2100726, "relation_to_type": "type", "validated": true, "ani": 76.0426, "matched_fragments": 54, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polaribacter gangjinensis", "strain": "strain=JCM 16152", "accession": "GCA_020532765.1", "taxid": 574710, "species_taxid": 574710, "relation_to_type": "type", "validated": true, "ani": 75.9197, "matched_fragments": 59, "total_fragments": 681, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polaribacter gangjinensis", "strain": "strain=KCTC 22729", "accession": "GCA_002954645.1", "taxid": 574710, 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