{ "tc_result": [ { "organism_name": "Thiogranum longum", "strain": "strain=DSM 19610", "accession": "GCA_004339085.1", "taxid": 1537524, "species_taxid": 1537524, "relation_to_type": "type", "validated": true, "ani": 76.7852, "matched_fragments": 59, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidihalobacter prosperus", "strain": "strain=DSM 5130", "accession": "GCA_000754095.2", "taxid": 160660, "species_taxid": 160660, "relation_to_type": "type", "validated": true, "ani": 76.7788, "matched_fragments": 50, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfuricaulis limicola", "strain": "strain=HA5", "accession": "GCA_002355735.1", "taxid": 1620215, "species_taxid": 1620215, "relation_to_type": "type", "validated": true, "ani": 76.4928, "matched_fragments": 71, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas sagittaria", "strain": "strain=JCM 18195", "accession": "GCA_900115715.1", "taxid": 1135990, "species_taxid": 1135990, "relation_to_type": "type", "validated": true, "ani": 76.4291, "matched_fragments": 69, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiohalocapsa marina", "strain": "strain=DSM 19078", "accession": "GCA_008632335.1", "taxid": 424902, "species_taxid": 424902, "relation_to_type": "type", "validated": true, "ani": 76.4183, "matched_fragments": 82, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiohalophilus thiocyanatoxydans", "strain": "strain=DSM 16326", "accession": "GCA_004366735.1", "taxid": 381308, "species_taxid": 381308, "relation_to_type": "type", "validated": true, "ani": 76.3964, "matched_fragments": 67, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas aromaticivorans", "strain": "strain=MAP12", "accession": "GCA_019097855.1", "taxid": 2849492, "species_taxid": 2849492, "relation_to_type": "type", "validated": true, "ani": 76.1801, "matched_fragments": 68, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylogaea oryzae", "strain": "strain=E10", "accession": "GCA_019669985.1", "taxid": 1295382, "species_taxid": 1295382, "relation_to_type": "type", "validated": true, "ani": 76.0397, "matched_fragments": 79, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio versutus", "strain": "strain=AL 2", "accession": "GCA_001999325.1", "taxid": 106634, "species_taxid": 106634, "relation_to_type": "type", "validated": true, "ani": 76.0233, "matched_fragments": 60, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Plasticicumulans acidivorans", "strain": "strain=DSM 23606", "accession": "GCA_003182095.1", "taxid": 886464, "species_taxid": 886464, "relation_to_type": "type", "validated": true, "ani": 75.9383, "matched_fragments": 63, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lysobacter capsici", "strain": "strain=VKM B-2533", "accession": "GCA_014779555.2", "taxid": 435897, "species_taxid": 435897, "relation_to_type": "type", "validated": true, "ani": 75.7572, "matched_fragments": 67, "total_fragments": 950, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 63.64, "contamination": 5.73, "strain_heterogeneity": 25.0 }, "gtdb_result": [ { "accession": "GCA_011051475.1", "gtdb_species": "s__GCA-2746365 sp011051475", "ani": 77.6675, "matched_fragments": 150, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SZUA-229;f__SZUA-229;g__GCA-2746365", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_015494295.1", "gtdb_species": "s__Thiogranum sp015494295", "ani": 77.2977, "matched_fragments": 126, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__DSM-19610;f__DSM-19610;g__Thiogranum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.47", "min_intra_species_ani": "99.47", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_015488295.1", "gtdb_species": "s__GCA-2746365 sp015488295", "ani": 77.0959, "matched_fragments": 144, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SZUA-229;f__SZUA-229;g__GCA-2746365", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011371455.1", "gtdb_species": "s__DRQN01 sp011371455", "ani": 76.9521, "matched_fragments": 74, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SZUA-152;f__SZUA-152;g__DRQN01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.38", "min_intra_species_ani": "97.35", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.88", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_002356355.1", "gtdb_species": "s__Thiohalobacter thiocyanaticus_A", "ani": 76.9459, "matched_fragments": 111, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalobacterales;f__Thiohalobacteraceae;g__Thiohalobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.53", "min_intra_species_ani": "98.53", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004339085.1", "gtdb_species": "s__Thiogranum longum", "ani": 76.7869, "matched_fragments": 58, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__DSM-19610;f__DSM-19610;g__Thiogranum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000754095.2", "gtdb_species": "s__Acidihalobacter prosperus", "ani": 76.7788, "matched_fragments": 50, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Acidihalobacteraceae;g__Acidihalobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_015484935.1", "gtdb_species": "s__S139-92 sp015484935", "ani": 76.7742, "matched_fragments": 85, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SZUA-229;f__SZUA-229;g__S139-92", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_005240065.1", "gtdb_species": "s__Ga0077554 sp005240065", "ani": 76.6513, "matched_fragments": 63, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ga0077554;f__Ga007554;g__Ga0077554", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008632335.1", "gtdb_species": "s__Thiohalocapsa marina", "ani": 76.4183, "matched_fragments": 82, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiohalocapsa", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_015484945.1", "gtdb_species": "s__WFUO01 sp015484945", "ani": 76.3364, "matched_fragments": 63, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__WFUO01;f__WFUO01;g__WFUO01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011389885.1", "gtdb_species": "s__JABBTK01 sp011389885", "ani": 76.1806, "matched_fragments": 63, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__JABBTK01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900107375.1", "gtdb_species": "s__Lysobacter sp900107375", "ani": 75.9832, "matched_fragments": 72, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_007695245.1", "gtdb_species": "s__REEE01 sp007695245", "ani": 75.9678, "matched_fragments": 67, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Competibacterales;f__Competibacteraceae;g__REEE01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013178375.1", "gtdb_species": "s__Ch67 sp013178375", "ani": 75.964, "matched_fragments": 68, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Ketobacteraceae;g__Ch67", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_015485125.1", "gtdb_species": "s__S139-57 sp015485125", "ani": 75.9173, "matched_fragments": 60, "total_fragments": 950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__S139-57;g__S139-57", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }