{
    "type": "genome",
    "identifier": "GCA_026996165.1",
    "organism": "Campylobacteraceae bacterium",
    "title": "Campylobacteraceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Portland State University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026996165.1",
        "bioproject": "PRJNA821212",
        "biosample": "SAMN27360551",
        "wgs_master": "JALWMP000000000.1",
        "refseq_category": "na",
        "taxid": "2268179",
        "species_taxid": "2268179",
        "organism_name": "Campylobacteraceae bacterium",
        "infraspecific_name": "",
        "isolate": "M17_metabat2_scaf2bin.170",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/19",
        "asm_name": "ASM2699616v1",
        "submitter": "Portland State University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/996/165/GCA_026996165.1_ASM2699616v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-19",
    "dateModified": "2022-12-19",
    "datePublished": "2022-12-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Campylobacteraceae bacterium"
        ],
        "sample_taxid": [
            "2268179"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: Lau Basin"
        ],
        "sample_host_location_id": [],
        "data_size": "0.521 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 69.56,
        "contamination": 2.27,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1863977",
        "Number of Sequences": "192",
        "Longest Sequences (bp)": "57089",
        "N50 (bp)": "14839",
        "Gap Ratio (%)": "0.012339",
        "GCcontent (%)": "32.7",
        "Number of CDSs": "1720",
        "Average Protein Length": "293.9",
        "Coding Ratio (%)": "81.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "32",
        "Number of CRISPRs": "4"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 69.56,
            "contamination": 2.27,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_003978395.1",
                "gtdb_species": "s__UBA1140 sp003978395",
                "ani": 78.2152,
                "matched_fragments": 163,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902727905.1",
                "gtdb_species": "s__UBA1140 sp902727905",
                "ani": 78.0576,
                "matched_fragments": 146,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902727995.1",
                "gtdb_species": "s__UBA1140 sp902727995",
                "ani": 77.9606,
                "matched_fragments": 157,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902727895.1",
                "gtdb_species": "s__UBA1140 sp902727895",
                "ani": 77.9446,
                "matched_fragments": 167,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015494795.1",
                "gtdb_species": "s__UBA1140 sp015494795",
                "ani": 77.8117,
                "matched_fragments": 152,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902727915.1",
                "gtdb_species": "s__UBA1140 sp902727915",
                "ani": 77.7996,
                "matched_fragments": 176,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018822805.1",
                "gtdb_species": "s__UBA1140 sp018822805",
                "ani": 77.7699,
                "matched_fragments": 182,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_010892395.1",
                "gtdb_species": "s__UBA1140 sp010892395",
                "ani": 77.7678,
                "matched_fragments": 77,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902727935.1",
                "gtdb_species": "s__UBA1140 sp902727935",
                "ani": 77.7287,
                "matched_fragments": 168,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013153055.1",
                "gtdb_species": "s__UBA1140 sp013153055",
                "ani": 77.2355,
                "matched_fragments": 132,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016744805.1",
                "gtdb_species": "s__SZUA-451 sp016744805",
                "ani": 76.3963,
                "matched_fragments": 69,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__SZUA-451",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.448,
        "cell_length": 0.144,
        "doubling_h": 0.072,
        "growth_tmp": 34.13,
        "optimum_tmp": 32.939,
        "optimum_ph": 6.669,
        "genome_size": 2164812.451,
        "gc_content": 33.135,
        "coding_genes": 2055.634,
        "rRNA16S_genes": 2.909,
        "tRNA_genes": 46.061,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.904,
        "range_salinity": 0.75,
        "facultative_respiration": 0.06,
        "anaerobic_respiration": 0.12,
        "aerobic_respiration": 0.82,
        "mesophilic_range_tmp": 0.947,
        "thermophilic_range_tmp": 0.052,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.444,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.027,
        "vibrio_cell_shape": 0.138,
        "spiral_cell_shape": 0.388
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurovaceae",
        "g__UBA1140",
        "s__UBA1140 sp026996165"
    ],
    "_genome_taxon": [
        "Campylobacteraceae",
        "bacterium",
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurovaceae",
        "g__UBA1140",
        "s__UBA1140 sp026996165",
        "Bacteria",
        "Campylobacterota",
        "Campylobacteria",
        "Campylobacterales",
        "Sulfurovaceae",
        "UBA1140",
        "UBA1140",
        "sp026996165"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}