{
    "type": "genome",
    "identifier": "GCA_026998065.1",
    "organism": "Anaerolineae bacterium",
    "title": "Anaerolineae bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Portland State University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026998065.1",
        "bioproject": "PRJNA821212",
        "biosample": "SAMN27358891",
        "wgs_master": "JALTRI000000000.1",
        "refseq_category": "na",
        "taxid": "2052143",
        "species_taxid": "2052143",
        "organism_name": "Anaerolineae bacterium",
        "infraspecific_name": "",
        "isolate": "S140_maxbin2_scaf2bin.264",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/19",
        "asm_name": "ASM2699806v1",
        "submitter": "Portland State University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/998/065/GCA_026998065.1_ASM2699806v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-19",
    "dateModified": "2022-12-19",
    "datePublished": "2022-12-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Anaerolineae bacterium"
        ],
        "sample_taxid": [
            "2052143"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: Brothers volcano"
        ],
        "sample_host_location_id": [],
        "data_size": "1.386 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.15,
        "contamination": 8.13,
        "strain_heterogeneity": 40.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4869753",
        "Number of Sequences": "1568",
        "Longest Sequences (bp)": "51755",
        "N50 (bp)": "4115",
        "Gap Ratio (%)": "0.021767",
        "GCcontent (%)": "65.7",
        "Number of CDSs": "3048",
        "Average Protein Length": "291.3",
        "Coding Ratio (%)": "54.7",
        "Number of rRNAs": "1",
        "Number of tRNAs": "54",
        "Number of CRISPRs": "15"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Litorilinea aerophila",
                "strain": "strain=ATCC BAA-2444",
                "accession": "GCA_006569185.2",
                "taxid": 1204385,
                "species_taxid": 1204385,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9245,
                "matched_fragments": 80,
                "total_fragments": 841,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptacidiphilus albus",
                "strain": "strain=NBRC 100918",
                "accession": "GCA_000787755.1",
                "taxid": 105425,
                "species_taxid": 105425,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7312,
                "matched_fragments": 62,
                "total_fragments": 841,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.15,
            "contamination": 8.13,
            "strain_heterogeneity": 40.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_015484715.1",
                "gtdb_species": "s__S140-20 sp015484715",
                "ani": 99.0002,
                "matched_fragments": 526,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__S140-20;f__S140-20;g__S140-20",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_015491235.1",
                "gtdb_species": "s__WFWG01 sp015491235",
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                "matched_fragments": 70,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Ardenticatenales;f__Ardenticatenaceae;g__WFWG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.02",
                "min_intra_species_ani": "98.95",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_011192125.1",
                "gtdb_species": "s__DUEL01 sp011192125",
                "ani": 76.9738,
                "matched_fragments": 138,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__B4-G1;f__DUEL01;g__DUEL01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015494005.1",
                "gtdb_species": "s__S144-5 sp015494005",
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                "matched_fragments": 87,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__S144-5",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003648085.1",
                "gtdb_species": "s__B30-G15 sp003648085",
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                "matched_fragments": 74,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__B4-G1;f__B4-G1;g__B30-G15",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.10",
                "min_intra_species_ani": "98.10",
                "mean_intra_species_af": "0.72",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_011362935.1",
                "gtdb_species": "s__SpSt-77 sp011362935",
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                "matched_fragments": 100,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__B4-G1;f__DUEL01;g__SpSt-77",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014360895.1",
                "gtdb_species": "s__SpSt-77 sp014360895",
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                "matched_fragments": 98,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__B4-G1;f__DUEL01;g__SpSt-77",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011334325.1",
                "gtdb_species": "s__DTPP01 sp011334325",
                "ani": 76.0971,
                "matched_fragments": 87,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__DTPP01;f__DTPP01;g__DTPP01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011048175.1",
                "gtdb_species": "s__DSLN01 sp011048175",
                "ani": 76.0583,
                "matched_fragments": 69,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__DSLN01;f__DSLN01;g__DSLN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.86",
                "min_intra_species_ani": "99.86",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_006569185.1",
                "gtdb_species": "s__Litorilinea aerophila",
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                "matched_fragments": 80,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Litorilinea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.85",
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                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_011046405.1",
                "gtdb_species": "s__DSAR01 sp011046405",
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                "matched_fragments": 57,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__B4-G1;f__B4-G1;g__DSAR01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016783285.1",
                "gtdb_species": "s__BS750m-G37 sp016783285",
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                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__B4-G1;f__B4-G1;g__BS750m-G37",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017999235.1",
                "gtdb_species": "s__SpSt-583 sp017999235",
                "ani": 75.6464,
                "matched_fragments": 51,
                "total_fragments": 841,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA6663;g__SpSt-583",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011192155.1",
                "gtdb_species": "s__B4-G1 sp003648025",
                "ani": 75.4246,
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                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__B4-G1;f__B4-G1;g__B4-G1",
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                "mean_intra_species_ani": "99.00",
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                "mean_intra_species_af": "0.73",
                "min_intra_species_af": "0.71",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
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        "f__S140-20",
        "g__S140-20",
        "s__S140-20 sp015484715"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__S140-20",
        "f__S140-20",
        "g__S140-20",
        "s__S140-20 sp015484715",
        "Bacteria",
        "Chloroflexota",
        "Anaerolineae",
        "S140-20",
        "S140-20",
        "S140-20",
        "S140-20",
        "sp015484715"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}