{ "type": "genome", "identifier": "GCA_027072425.1", "organism": "Sulfurimonas sp.", "title": "Sulfurimonas sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Portland State University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_027072425.1", "bioproject": "PRJNA821212", "biosample": "SAMN27358379", "wgs_master": "JALSXQ000000000.1", "refseq_category": "na", "taxid": "2022749", "species_taxid": "2022749", "organism_name": "Sulfurimonas sp.", "infraspecific_name": "", "isolate": "S012_maxbin2_scaf2bin.149", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/19", "asm_name": "ASM2707242v1", "submitter": "Portland State University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/027/072/425/GCA_027072425.1_ASM2707242v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-19", "dateModified": "2022-12-19", "datePublished": "2022-12-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Sulfurimonas sp." ], "sample_taxid": [ "2022749" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Pacific Ocean: Brothers volcano" ], "sample_host_location_id": [], "data_size": "0.529 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.38, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1881555", "Number of Sequences": "338", "Longest Sequences (bp)": "35970", "N50 (bp)": "8854", "Gap Ratio (%)": "0.006909", "GCcontent (%)": "31.2", "Number of CDSs": "1594", "Average Protein Length": "291.2", "Coding Ratio (%)": "74.0", "Number of rRNAs": "4", "Number of tRNAs": "48", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Candidatus Sulfurimonas marisnigri", "strain": "strain=SoZ1", "accession": "GCA_015265475.1", "taxid": 2740405, "species_taxid": 2740405, "relation_to_type": "type", "validated": true, "ani": 78.5266, "matched_fragments": 157, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas lithotrophica", "strain": "strain=GYSZ_1", "accession": "GCA_009258225.1", "taxid": 2590022, "species_taxid": 2590022, "relation_to_type": "type", "validated": true, "ani": 78.5074, "matched_fragments": 138, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas gotlandica", "strain": "strain=GD 1", "accession": "GCA_000156095.1", "taxid": 1176482, "species_taxid": 1176482, "relation_to_type": "type", "validated": true, "ani": 78.4062, "matched_fragments": 192, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas gotlandica", "strain": "strain=GD1", "accession": "GCA_000242915.2", "taxid": 1176482, "species_taxid": 1176482, "relation_to_type": "type", "validated": true, "ani": 78.3616, "matched_fragments": 198, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Candidatus Sulfurimonas baltica", "strain": "strain=GD2", "accession": "GCA_015265455.1", "taxid": 2740404, "species_taxid": 2740404, "relation_to_type": "type", "validated": true, "ani": 78.0551, "matched_fragments": 169, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas denitrificans", "strain": "strain=DSM 1251", "accession": "GCA_000012965.1", "taxid": 39766, "species_taxid": 39766, "relation_to_type": "type", "validated": true, "ani": 77.7668, "matched_fragments": 124, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas xiamenensis", "strain": "strain=1-1N", "accession": "GCA_009258045.1", "taxid": 2590021, "species_taxid": 2590021, "relation_to_type": "type", "validated": true, "ani": 77.7561, "matched_fragments": 113, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas indica", "strain": "strain=NW8N", "accession": "GCA_009192995.1", "taxid": 2508707, "species_taxid": 2508707, "relation_to_type": "type", "validated": true, "ani": 77.7325, "matched_fragments": 105, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas hongkongensis", "strain": "strain=AST-10", "accession": "GCA_000445475.1", "taxid": 1172190, "species_taxid": 1172190, "relation_to_type": "type", "validated": true, "ani": 77.7268, "matched_fragments": 139, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas autotrophica", "strain": "strain=DSM 16294", "accession": "GCA_000147355.1", "taxid": 202747, "species_taxid": 202747, "relation_to_type": "type", "validated": true, "ani": 77.0423, "matched_fragments": 121, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter defluvii", "strain": "strain=LMG 25694", "accession": "GCA_013201725.1", "taxid": 873191, "species_taxid": 873191, "relation_to_type": "type", "validated": true, "ani": 75.788, "matched_fragments": 53, "total_fragments": 452, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.38, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_015487435.1", "gtdb_species": "s__Sulfurimonas sp015487435", "ani": 99.3085, "matched_fragments": 385, "total_fragments": 452, 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