{
    "type": "genome",
    "identifier": "GCA_027310225.1",
    "organism": "bacterium",
    "title": "bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "an eLibrary of Microbial Systematics and Genomics",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_027310225.1",
        "bioproject": "PRJNA834572",
        "biosample": "SAMN28081211",
        "wgs_master": "DAIDBG000000000.1",
        "refseq_category": "na",
        "taxid": "1869227",
        "species_taxid": "1869227",
        "organism_name": "bacterium",
        "infraspecific_name": "",
        "isolate": "clean1860",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/27",
        "asm_name": "ASM2731022v1",
        "submitter": "an eLibrary of Microbial Systematics and Genomics",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/027/310/225/GCA_027310225.1_ASM2731022v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-27",
    "dateModified": "2022-12-27",
    "datePublished": "2022-12-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "bacterium"
        ],
        "sample_taxid": [
            "1869227"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Canaa dos Carajas"
        ],
        "sample_host_location_id": [],
        "data_size": "0.929 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 76.85,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3339197",
        "Number of Sequences": "386",
        "Longest Sequences (bp)": "44173",
        "N50 (bp)": "12334",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.9",
        "Number of CDSs": "2923",
        "Average Protein Length": "290.8",
        "Coding Ratio (%)": "76.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "42",
        "Number of CRISPRs": "5"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Pelomicrobium methylotrophicum",
                "strain": "strain=SM250",
                "accession": "GCA_008014345.1",
                "taxid": 2602750,
                "species_taxid": 2602750,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0826,
                "matched_fragments": 139,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfuritortus calidifontis",
                "strain": "strain=J1A",
                "accession": "GCA_003967275.1",
                "taxid": 1914471,
                "species_taxid": 1914471,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9924,
                "matched_fragments": 131,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera aminoaromatica",
                "strain": "strain=S2",
                "accession": "GCA_000310185.1",
                "taxid": 164330,
                "species_taxid": 164330,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9663,
                "matched_fragments": 173,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfuritortus calidifontis",
                "strain": "strain=DSM 103923",
                "accession": "GCA_004346085.1",
                "taxid": 1914471,
                "species_taxid": 1914471,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9002,
                "matched_fragments": 129,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera phenylacetica",
                "strain": "strain=B4P",
                "accession": "GCA_000310225.1",
                "taxid": 164400,
                "species_taxid": 164400,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.791,
                "matched_fragments": 192,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Crenobacter luteus",
                "strain": "strain=DSM 27258",
                "accession": "GCA_004345725.1",
                "taxid": 1452487,
                "species_taxid": 1452487,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7057,
                "matched_fragments": 150,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ferrigenium kumadai",
                "strain": "strain=An22",
                "accession": "GCA_018324385.1",
                "taxid": 1682490,
                "species_taxid": 1682490,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6043,
                "matched_fragments": 95,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera chlorobenzoica",
                "strain": "strain=3CB-1",
                "accession": "GCA_900108255.1",
                "taxid": 96773,
                "species_taxid": 96773,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5382,
                "matched_fragments": 155,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azoarcus rhizosphaerae",
                "strain": "strain=CC-YHH848",
                "accession": "GCA_004801305.1",
                "taxid": 2565932,
                "species_taxid": 2565932,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4517,
                "matched_fragments": 173,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Methyloversatilis discipulorum",
                "strain": "strain=FAM1",
                "accession": "GCA_000527135.1",
                "taxid": 1119528,
                "species_taxid": 1119528,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.399,
                "matched_fragments": 155,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimicrobium lacus",
                "strain": "strain=skT11",
                "accession": "GCA_011764585.1",
                "taxid": 2715678,
                "species_taxid": 2715678,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3476,
                "matched_fragments": 100,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nitrogeniibacter mangrovi",
                "strain": "strain=M9-3-2",
                "accession": "GCA_010983895.1",
                "taxid": 2016596,
                "species_taxid": 2016596,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2914,
                "matched_fragments": 129,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vogesella alkaliphila",
                "strain": "strain=KCTC 32041",
                "accession": "GCA_014652475.1",
                "taxid": 1193621,
                "species_taxid": 1193621,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2874,
                "matched_fragments": 115,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fulvimonas soli",
                "strain": "strain=DSM 14263",
                "accession": "GCA_003148905.1",
                "taxid": 155197,
                "species_taxid": 155197,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1192,
                "matched_fragments": 132,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thioalkalivibrio thiocyanodenitrificans",
                "strain": "strain=ARhD 1",
                "accession": "GCA_000378965.1",
                "taxid": 243063,
                "species_taxid": 243063,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0566,
                "matched_fragments": 59,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fulvimonas soli",
                "strain": "strain=LMG 19981",
                "accession": "GCA_006352285.1",
                "taxid": 155197,
                "species_taxid": 155197,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0517,
                "matched_fragments": 132,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vogesella fluminis",
                "strain": "strain=KCTC 23713",
                "accession": "GCA_014652335.1",
                "taxid": 1069161,
                "species_taxid": 1069161,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0059,
                "matched_fragments": 97,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vogesella urethralis",
                "strain": "strain=YM-1",
                "accession": "GCA_007644045.2",
                "taxid": 2592656,
                "species_taxid": 2592656,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9379,
                "matched_fragments": 69,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vogesella indigofera",
                "strain": "strain=DSM 3303",
                "accession": "GCA_003633895.1",
                "taxid": 45465,
                "species_taxid": 45465,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8611,
                "matched_fragments": 94,
                "total_fragments": 905,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 76.85,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016177355.1",
                "gtdb_species": "s__SG8-41 sp016177355",
                "ani": 81.5382,
                "matched_fragments": 306,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__SG8-41",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011330925.1",
                "gtdb_species": "s__SG8-41 sp011330925",
                "ani": 81.3425,
                "matched_fragments": 318,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__SG8-41",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016183675.1",
                "gtdb_species": "s__SG8-41 sp016183675",
                "ani": 81.0016,
                "matched_fragments": 469,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__SG8-41",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016192825.1",
                "gtdb_species": "s__SG8-41 sp016192825",
                "ani": 80.8616,
                "matched_fragments": 529,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__SG8-41",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001771935.1",
                "gtdb_species": "s__SG8-41 sp001771935",
                "ani": 80.8201,
                "matched_fragments": 477,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__SG8-41",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016868035.1",
                "gtdb_species": "s__SG8-41 sp016868035",
                "ani": 79.4493,
                "matched_fragments": 465,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__SG8-41",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001772005.1",
                "gtdb_species": "s__DSOT01 sp001772005",
                "ani": 78.8634,
                "matched_fragments": 430,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__DSOT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011046905.1",
                "gtdb_species": "s__DSOT01 sp011046905",
                "ani": 78.7981,
                "matched_fragments": 395,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__DSOT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001771985.1",
                "gtdb_species": "s__DSOT01 sp001771985",
                "ani": 78.5322,
                "matched_fragments": 352,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__DSOT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016202565.1",
                "gtdb_species": "s__DSOT01 sp016202565",
                "ani": 78.1638,
                "matched_fragments": 341,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__DSOT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001953215.1",
                "gtdb_species": "s__Usitatibacter sp001953215",
                "ani": 76.7,
                "matched_fragments": 166,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__Usitatibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019136105.1",
                "gtdb_species": "s__RPQJ01 sp019136105",
                "ani": 76.2815,
                "matched_fragments": 65,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__RPQJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005889025.1",
                "gtdb_species": "s__PALSA-1003 sp005889025",
                "ani": 75.8647,
                "matched_fragments": 71,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__PALSA-1003",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.27",
                "min_intra_species_ani": "98.27",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002995625.1",
                "gtdb_species": "s__UDEA-SF1 sp002995625",
                "ani": 75.7556,
                "matched_fragments": 91,
                "total_fragments": 905,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Ahniellaceae;g__UDEA-SF1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__SG8-41",
        "g__SG8-41",
        "s__SG8-41 sp027310225"
    ],
    "_genome_taxon": [
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__SG8-41",
        "g__SG8-41",
        "s__SG8-41 sp027310225",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "SG8-41",
        "SG8-41",
        "SG8-41",
        "sp027310225"
    ],
    "_meo": [
        {
            "id": "MEO_0000034",
            "label": "acid mine drainage"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}