{
    "type": "genome",
    "identifier": "GCA_027326445.1",
    "organism": "Acetobacteraceae bacterium",
    "title": "Acetobacteraceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "an eLibrary of Microbial Systematics and Genomics",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_027326445.1",
        "bioproject": "PRJNA834572",
        "biosample": "SAMN28404484",
        "wgs_master": "DAHWEI000000000.1",
        "refseq_category": "na",
        "taxid": "1909293",
        "species_taxid": "1909293",
        "organism_name": "Acetobacteraceae bacterium",
        "infraspecific_name": "",
        "isolate": "clean905",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/27",
        "asm_name": "ASM2732644v1",
        "submitter": "an eLibrary of Microbial Systematics and Genomics",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/027/326/445/GCA_027326445.1_ASM2732644v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-27",
    "dateModified": "2022-12-27",
    "datePublished": "2022-12-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acetobacteraceae bacterium"
        ],
        "sample_taxid": [
            "1909293"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Guizhou, Zhijin"
        ],
        "sample_host_location_id": [],
        "data_size": "0.944 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 58.33,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3469846",
        "Number of Sequences": "323",
        "Longest Sequences (bp)": "63516",
        "N50 (bp)": "12764",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "69.4",
        "Number of CDSs": "2960",
        "Average Protein Length": "324.9",
        "Coding Ratio (%)": "83.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Rhodovastum atsumiense",
                "strain": "strain=G2-11",
                "accession": "GCA_937425535.1",
                "taxid": 504468,
                "species_taxid": 504468,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2514,
                "matched_fragments": 397,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acidisphaera rubrifaciens",
                "strain": "strain=HS-AP3",
                "accession": "GCA_000964365.1",
                "taxid": 50715,
                "species_taxid": 50715,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.961,
                "matched_fragments": 228,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodopila globiformis",
                "strain": "strain=DSM 161",
                "accession": "GCA_002937115.1",
                "taxid": 1071,
                "species_taxid": 1071,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.644,
                "matched_fragments": 365,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas gilardii subsp. rosea",
                "strain": "strain=NCTC13290",
                "accession": "GCA_900455865.1",
                "taxid": 243956,
                "species_taxid": 257708,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9994,
                "matched_fragments": 264,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas coralli",
                "strain": "strain=M0104",
                "accession": "GCA_009829925.1",
                "taxid": 2545983,
                "species_taxid": 2545983,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9707,
                "matched_fragments": 315,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas mucosa",
                "strain": "strain=ATCC BAA-692",
                "accession": "GCA_000622225.1",
                "taxid": 207340,
                "species_taxid": 207340,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9623,
                "matched_fragments": 274,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas gilardii subsp. rosea",
                "strain": "strain=ATCC BAA-691",
                "accession": "GCA_000518625.1",
                "taxid": 243956,
                "species_taxid": 257708,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.947,
                "matched_fragments": 274,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas mucosa",
                "strain": "strain=NCTC13291",
                "accession": "GCA_900455935.1",
                "taxid": 207340,
                "species_taxid": 207340,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9029,
                "matched_fragments": 276,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Siccirubricoccus deserti",
                "strain": "strain=CGMCC 1.15936",
                "accession": "GCA_014644195.1",
                "taxid": 2013562,
                "species_taxid": 2013562,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7027,
                "matched_fragments": 319,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas haemaphysalidis",
                "strain": "strain=546",
                "accession": "GCA_017355405.1",
                "taxid": 2768162,
                "species_taxid": 2768162,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6939,
                "matched_fragments": 294,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Siccirubricoccus deserti",
                "strain": "strain=SYSU D8009",
                "accession": "GCA_014283215.1",
                "taxid": 2013562,
                "species_taxid": 2013562,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6921,
                "matched_fragments": 322,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas oryzicola",
                "strain": "strain=KCTC 22478",
                "accession": "GCA_012163135.1",
                "taxid": 535904,
                "species_taxid": 535904,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6845,
                "matched_fragments": 320,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas rubea",
                "strain": "strain=MO17",
                "accession": "GCA_016106015.1",
                "taxid": 2748666,
                "species_taxid": 2748666,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6164,
                "matched_fragments": 253,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseococcus pinisoli",
                "strain": "strain=XZZS9",
                "accession": "GCA_018413645.1",
                "taxid": 2835040,
                "species_taxid": 2835040,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6154,
                "matched_fragments": 214,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseococcus microcysteis",
                "strain": "strain=NIBR12",
                "accession": "GCA_014764365.1",
                "taxid": 2771361,
                "species_taxid": 2771361,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5765,
                "matched_fragments": 243,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Belnapia arida",
                "strain": "strain=T18",
                "accession": "GCA_016773205.1",
                "taxid": 2804533,
                "species_taxid": 2804533,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5644,
                "matched_fragments": 304,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseococcus thiosulfatophilus",
                "strain": "strain=RB-3",
                "accession": "GCA_017311575.1",
                "taxid": 35813,
                "species_taxid": 35813,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.403,
                "matched_fragments": 247,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovarius crocodyli",
                "strain": "strain=CCP-6",
                "accession": "GCA_004005855.1",
                "taxid": 1979269,
                "species_taxid": 1979269,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4027,
                "matched_fragments": 267,
                "total_fragments": 995,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 58.33,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903970625.1",
                "gtdb_species": "s__CAJCJG01 sp903970625",
                "ani": 80.6878,
                "matched_fragments": 554,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__CAJCJG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903864895.1",
                "gtdb_species": "s__CAIPHQ01 sp903864895",
                "ani": 79.6147,
                "matched_fragments": 482,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__CAIPHQ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017307335.1",
                "gtdb_species": "s__JAFKFJ01 sp017307335",
                "ani": 78.9896,
                "matched_fragments": 398,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__JAFKFJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001899585.1",
                "gtdb_species": "s__70-18 sp001899585",
                "ani": 78.9873,
                "matched_fragments": 441,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__70-18",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.94",
                "min_intra_species_ani": "99.94",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003133265.1",
                "gtdb_species": "s__PALSA-911 sp003133265",
                "ani": 78.6993,
                "matched_fragments": 266,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__PALSA-911",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903918195.1",
                "gtdb_species": "s__BOG-930 sp903918195",
                "ani": 78.5035,
                "matched_fragments": 343,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__BOG-930",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.84",
                "min_intra_species_ani": "99.84",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903907955.1",
                "gtdb_species": "s__BOG-930 sp903907955",
                "ani": 78.4811,
                "matched_fragments": 347,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__BOG-930",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.93",
                "min_intra_species_ani": "99.75",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCF_008630155.1",
                "gtdb_species": "s__Rhodovastum atsumiense",
                "ani": 78.2602,
                "matched_fragments": 395,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Rhodovastum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017304945.1",
                "gtdb_species": "s__69-11 sp017304945",
                "ani": 77.8066,
                "matched_fragments": 348,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__69-11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019240395.1",
                "gtdb_species": "s__JAFAYA01 sp019240395",
                "ani": 77.6593,
                "matched_fragments": 308,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__JAFAYA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002937115.1",
                "gtdb_species": "s__Rhodopila globiformis",
                "ani": 77.657,
                "matched_fragments": 363,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Rhodopila",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001898425.1",
                "gtdb_species": "s__69-11 sp001898425",
                "ani": 77.4995,
                "matched_fragments": 342,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__69-11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.84",
                "min_intra_species_ani": "99.84",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_014644455.1",
                "gtdb_species": "s__Caldovatus sediminis",
                "ani": 76.8977,
                "matched_fragments": 367,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Caldovatus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_006704265.1",
                "gtdb_species": "s__Elioraea sp006704265",
                "ani": 76.5907,
                "matched_fragments": 252,
                "total_fragments": 995,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Elioraea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.17,
        "cell_length": 0.155,
        "doubling_h": 0.614,
        "growth_tmp": 28.985,
        "optimum_tmp": 29.179,
        "optimum_ph": 6.239,
        "genome_size": 3819566.29,
        "gc_content": 59.366,
        "coding_genes": 3194.615,
        "rRNA16S_genes": 3.921,
        "tRNA_genes": 55.256,
        "gram_stain": 0.0,
        "sporulation": 0.046,
        "motility": 0.618,
        "range_salinity": 0.0,
        "facultative_respiration": 0.011,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.988,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.711,
        "coccus_cell_shape": 0.152,
        "filament_cell_shape": 0.016,
        "coccobacillus_cell_shape": 0.118,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Acetobacterales",
        "f__Acetobacteraceae",
        "g__CAJCJG01",
        "s__CAJCJG01 sp021808185"
    ],
    "_genome_taxon": [
        "Acetobacteraceae",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Acetobacterales",
        "f__Acetobacteraceae",
        "g__CAJCJG01",
        "s__CAJCJG01 sp021808185",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Acetobacterales",
        "Acetobacteraceae",
        "CAJCJG01",
        "CAJCJG01",
        "sp021808185"
    ],
    "_meo": [
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}