{ "type": "genome", "identifier": "GCA_027352875.1", "organism": "Gryllotalpicola sp.", "title": "Gryllotalpicola sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "an eLibrary of Microbial Systematics and Genomics", "publication": [ {} ], "properties": { "assembly_accession": "GCA_027352875.1", "bioproject": "PRJNA834572", "biosample": "SAMN28404626", "wgs_master": "DAIEII000000000.1", "refseq_category": "na", "taxid": "1932787", "species_taxid": "1932787", "organism_name": "Gryllotalpicola sp.", "infraspecific_name": "", "isolate": "clean133", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/27", "asm_name": "ASM2735287v1", "submitter": "an eLibrary of Microbial Systematics and Genomics", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/027/352/875/GCA_027352875.1_ASM2735287v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-27", "dateModified": "2022-12-27", "datePublished": "2022-12-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Gryllotalpicola sp." ], "sample_taxid": [ "1932787" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Guizhou, Banpo" ], "sample_host_location_id": [], "data_size": "0.525 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1928704", "Number of Sequences": "80", "Longest Sequences (bp)": "105587", "N50 (bp)": "36913", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "69.3", "Number of CDSs": "1838", "Average Protein Length": "309.4", "Coding Ratio (%)": "88.5", "Number of rRNAs": "1", "Number of tRNAs": "47", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Gryllotalpicola ginsengisoli", "strain": "strain=DSM 22003", "accession": "GCA_000419445.1", "taxid": 444608, "species_taxid": 444608, "relation_to_type": "type", "validated": true, "ani": 80.3251, "matched_fragments": 349, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gryllotalpicola protaetiae", "strain": "strain=2DFW10M-5", "accession": "GCA_003627055.1", "taxid": 2419771, "species_taxid": 2419771, "relation_to_type": "type", "validated": true, "ani": 80.0674, "matched_fragments": 354, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces mediolanus", "strain": "strain=JCM 3346", "accession": "GCA_014648575.1", "taxid": 41986, "species_taxid": 41986, "relation_to_type": "type", "validated": true, "ani": 79.2505, "matched_fragments": 308, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leifsonia aquatica", "strain": "strain=ATCC 14665", "accession": "GCA_000469485.1", "taxid": 144185, "species_taxid": 144185, "relation_to_type": "type", "validated": true, "ani": 79.2336, "matched_fragments": 239, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces agglutinans", "strain": "strain=CFH 90414", "accession": "GCA_009647605.1", "taxid": 2662258, "species_taxid": 2662258, "relation_to_type": "type", "validated": true, "ani": 79.1061, "matched_fragments": 273, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leifsonia naganoensis", "strain": "strain=DSM 15166", "accession": "GCA_013410615.1", "taxid": 150025, "species_taxid": 150025, "relation_to_type": "type", "validated": true, "ani": 79.0605, "matched_fragments": 299, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces luteolus", "strain": "strain=JCM 11431", "accession": "GCA_009729855.1", "taxid": 88373, "species_taxid": 88373, "relation_to_type": "type", "validated": true, "ani": 79.0373, "matched_fragments": 300, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces mariniharenae", "strain": "strain=NEAU-184", "accession": "GCA_008122505.1", "taxid": 2604423, "species_taxid": 2604423, "relation_to_type": "type", "validated": true, "ani": 79.0159, "matched_fragments": 306, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces bracchium", "strain": "strain=JCM 11433", "accession": "GCA_009709675.1", "taxid": 88376, "species_taxid": 88376, "relation_to_type": "type", "validated": true, "ani": 79.0159, "matched_fragments": 303, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leifsonia aquatica", "strain": "strain=DSM 20146", "accession": "GCA_014190775.1", "taxid": 144185, "species_taxid": 144185, "relation_to_type": "type", "validated": true, "ani": 78.9784, "matched_fragments": 303, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces subbeticus", "strain": "strain=DSM 16689", "accession": "GCA_000421565.1", "taxid": 293890, "species_taxid": 293890, "relation_to_type": "type", "validated": true, "ani": 78.8272, "matched_fragments": 278, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces salentinus", "strain": "strain=JCM 14323", "accession": "GCA_009749395.1", "taxid": 269421, "species_taxid": 269421, "relation_to_type": "type", "validated": true, "ani": 78.8076, "matched_fragments": 271, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces cavernae", "strain": "strain=SYSU K20354", "accession": "GCA_021044935.1", "taxid": 2898659, "species_taxid": 2898659, "relation_to_type": "type", "validated": true, "ani": 78.7971, "matched_fragments": 282, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces ramosus", "strain": "strain=DSM 43045", "accession": "GCA_004216665.1", "taxid": 33879, "species_taxid": 33879, "relation_to_type": "type", "validated": true, "ani": 78.728, "matched_fragments": 281, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces humatus", "strain": "strain=JCM 14319", "accession": "GCA_021228295.1", "taxid": 279573, "species_taxid": 279573, "relation_to_type": "type", "validated": true, "ani": 78.6871, "matched_fragments": 279, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrococcus lahaulensis", "strain": "strain=DSM 17612", "accession": "GCA_000425105.1", "taxid": 341722, "species_taxid": 341722, "relation_to_type": "type", "validated": true, "ani": 78.6365, "matched_fragments": 265, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium gallinarum", "strain": "strain=Sa1CUA4", "accession": "GCA_014837165.1", "taxid": 2762209, "species_taxid": 2762209, "relation_to_type": "type", "validated": true, "ani": 78.6053, "matched_fragments": 245, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbiconiux solani", "strain": "strain=NBRC 106740", "accession": "GCA_001571005.1", "taxid": 661329, "species_taxid": 661329, "relation_to_type": "type", "validated": true, "ani": 78.5104, "matched_fragments": 273, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbiconiux moechotypicola", "strain": "strain=KCTC 19653", "accession": "GCA_024979255.1", "taxid": 637393, "species_taxid": 637393, "relation_to_type": "type", "validated": true, "ani": 78.4978, "matched_fragments": 266, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frigoribacterium faeni", "strain": "strain=DSM 10309", "accession": "GCA_014137965.1", "taxid": 145483, "species_taxid": 145483, "relation_to_type": "type", "validated": true, "ani": 78.3997, "matched_fragments": 236, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Labedella populi", "strain": "strain=8H24J-4-2", "accession": "GCA_004078655.1", "taxid": 2498850, "species_taxid": 2498850, "relation_to_type": "type", "validated": true, "ani": 78.3761, "matched_fragments": 202, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium ulmi", "strain": "strain=JCM 14282", "accession": "GCA_013004565.1", "taxid": 179095, "species_taxid": 179095, "relation_to_type": "type", "validated": true, "ani": 78.3194, "matched_fragments": 243, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frigoribacterium faeni", "strain": "strain=NBRC 103066", "accession": "GCA_007988805.1", "taxid": 145483, "species_taxid": 145483, "relation_to_type": "type", "validated": true, "ani": 78.3172, "matched_fragments": 245, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Labedella phragmitis", "strain": "strain=11W25H-1", "accession": "GCA_004078635.1", "taxid": 2498849, "species_taxid": 2498849, "relation_to_type": "type", "validated": true, "ani": 78.2679, "matched_fragments": 222, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Labedella endophytica", "strain": "strain=EGI 6500705", "accession": "GCA_003990045.1", "taxid": 1523160, "species_taxid": 1523160, "relation_to_type": "type", "validated": true, "ani": 78.2141, "matched_fragments": 226, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium allii", "strain": "strain=20TX0166", "accession": "GCA_021271025.1", "taxid": 2878384, "species_taxid": 2878384, "relation_to_type": "type", "validated": true, "ani": 78.1863, "matched_fragments": 239, "total_fragments": 603, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000419445.1", "gtdb_species": "s__Gryllotalpicola ginsengisoli", "ani": 80.3424, "matched_fragments": 348, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Gryllotalpicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009780695.1", "gtdb_species": "s__Gryllotalpicola sp009780695", "ani": 80.2731, "matched_fragments": 308, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Gryllotalpicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.84", "min_intra_species_ani": "99.84", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003627055.1", "gtdb_species": "s__Gryllotalpicola protaetiae", "ani": 80.0986, "matched_fragments": 352, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Gryllotalpicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009789225.1", "gtdb_species": "s__WSTA01 sp009789225", "ani": 79.4603, "matched_fragments": 286, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__WSTA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003627075.1", "gtdb_species": "s__Protaetiibacter intestinalis", "ani": 79.3625, "matched_fragments": 295, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Protaetiibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003852775.1", "gtdb_species": "s__Protaetiibacter sp003852775", "ani": 79.317, "matched_fragments": 274, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Protaetiibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014648575.1", "gtdb_species": "s__Agromyces mediolanus", "ani": 79.2347, "matched_fragments": 309, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001620055.1", "gtdb_species": "s__Agromyces sp001620055", "ani": 79.1816, "matched_fragments": 278, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003634985.1", "gtdb_species": "s__Agromyces sp003634985", "ani": 79.0863, "matched_fragments": 281, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009709675.1", "gtdb_species": "s__Agromyces bracchium", "ani": 79.0602, "matched_fragments": 300, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009729855.1", "gtdb_species": "s__Agromyces luteolus", "ani": 79.0535, "matched_fragments": 299, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013205055.1", "gtdb_species": "s__Rathayibacter sp013205055", "ani": 79.0235, "matched_fragments": 294, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rathayibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002797855.1", "gtdb_species": "s__Compostimonas suwonensis", "ani": 79.009, "matched_fragments": 284, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Compostimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001898805.1", "gtdb_species": "s__Leifsonia sp001898805", "ani": 78.9913, "matched_fragments": 291, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Leifsonia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014190775.1", "gtdb_species": "s__Leifsonia aquatica", "ani": 78.8957, "matched_fragments": 308, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Leifsonia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.62", "min_intra_species_ani": "97.25", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_004006235.1", "gtdb_species": "s__Agromyces sp004006235", "ani": 78.8804, "matched_fragments": 290, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003751785.1", "gtdb_species": "s__Frigoribacterium sp003751785", "ani": 78.83, "matched_fragments": 277, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Frigoribacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001280205.1", "gtdb_species": "s__Clavibacter capsici", "ani": 78.8228, "matched_fragments": 270, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Clavibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.16", "min_intra_species_ani": "95.31", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.91", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_004216665.1", "gtdb_species": "s__Agromyces ramosus", "ani": 78.7206, "matched_fragments": 282, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015351075.1", "gtdb_species": "s__Clavibacter sp015351075", "ani": 78.6976, "matched_fragments": 264, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Clavibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000069225.1", "gtdb_species": "s__Clavibacter sepedonicus", "ani": 78.6615, "matched_fragments": 254, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Clavibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.96", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_016907085.1", "gtdb_species": "s__Clavibacter michiganensis_O", "ani": 78.6481, "matched_fragments": 271, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Clavibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_010686705.1", "gtdb_species": "s__Diaminobutyricibacter tongyongensis", "ani": 78.5635, "matched_fragments": 232, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Diaminobutyricibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_900078385.1", "gtdb_species": "s__Microbacterium sp900078385", "ani": 78.4391, "matched_fragments": 230, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003097495.1", "gtdb_species": "s__Naasia flavum", "ani": 78.4106, "matched_fragments": 227, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Naasia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004078655.1", "gtdb_species": "s__Labedella populi", "ani": 78.35, "matched_fragments": 204, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Labedella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001423905.1", "gtdb_species": "s__Frigoribacterium sp001423905", "ani": 78.3157, "matched_fragments": 249, "total_fragments": 603, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Frigoribacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.23", "min_intra_species_ani": "96.23", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.35, "cell_length": 0.149, "doubling_h": null, "growth_tmp": 28.0, "optimum_tmp": 27.5, "optimum_ph": 6.666, "genome_size": null, "gc_content": null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": null, "sporulation": null, "motility": 1.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_gtdb_taxon": [ "d__Bacteria", "p__Actinomycetota", "c__Actinomycetes", "o__Actinomycetales", "f__Microbacteriaceae", "g__Gryllotalpicola", "s__Gryllotalpicola sp021779075" ], "_genome_taxon": [ "Gryllotalpicola", "sp.", "d__Bacteria", "p__Actinomycetota", "c__Actinomycetes", "o__Actinomycetales", "f__Microbacteriaceae", "g__Gryllotalpicola", "s__Gryllotalpicola sp021779075", "Bacteria", "Actinomycetota", "Actinomycetes", "Actinomycetales", "Microbacteriaceae", "Gryllotalpicola", "Gryllotalpicola", "sp021779075" ], "_meo": [ { "id": "MEO_0000066", "label": "sediment" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }