{ "type": "genome", "identifier": "GCA_027396295.1", "organism": "Acidimicrobiaceae bacterium", "title": "Acidimicrobiaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "an eLibrary of Microbial Systematics and Genomics", "publication": [ {} ], "properties": { "assembly_accession": "GCA_027396295.1", "bioproject": "PRJNA834572", "biosample": "SAMN28411300", "wgs_master": "DAHYJV000000000.1", "refseq_category": "na", "taxid": "2024894", "species_taxid": "2024894", "organism_name": "Acidimicrobiaceae bacterium", "infraspecific_name": "", "isolate": "clean4202", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/27", "asm_name": "ASM2739629v1", "submitter": "an eLibrary of Microbial Systematics and Genomics", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/027/396/295/GCA_027396295.1_ASM2739629v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-27", "dateModified": "2022-12-27", "datePublished": "2022-12-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Acidimicrobiaceae bacterium" ], "sample_taxid": [ "2024894" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Guangxi, Longshenao" ], "sample_host_location_id": [], "data_size": "0.917 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.45, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3373749", "Number of Sequences": "324", "Longest Sequences (bp)": "58982", "N50 (bp)": "18119", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "70.6", "Number of CDSs": "2882", "Average Protein Length": "316.1", "Coding Ratio (%)": "81.0", "Number of rRNAs": "1", "Number of tRNAs": "48", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Actinomarinicola tropica", "strain": "strain=SCSIO 58843", "accession": "GCA_009650215.1", "taxid": 2789776, "species_taxid": 2789776, "relation_to_type": "type", "validated": true, "ani": 76.0174, "matched_fragments": 156, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhabdothermincola salaria", "strain": "strain=EGI L10124", "accession": "GCA_021246445.1", "taxid": 2903142, "species_taxid": 2903142, "relation_to_type": "type", "validated": true, "ani": 75.9076, "matched_fragments": 147, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhabdothermincola sediminis", "strain": "strain=SYSU G02662", "accession": "GCA_014805525.1", "taxid": 2751370, "species_taxid": 2751370, "relation_to_type": "type", "validated": true, "ani": 75.8954, "matched_fragments": 113, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ilumatobacter fluminis", "strain": "strain=DSM 18936", "accession": "GCA_004364865.1", "taxid": 467091, "species_taxid": 467091, "relation_to_type": "type", "validated": true, "ani": 75.6917, "matched_fragments": 111, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desertimonas flava", "strain": "strain=SYSU D60003", "accession": "GCA_003426815.1", "taxid": 2064846, "species_taxid": 2064846, "relation_to_type": "type", "validated": true, "ani": 75.639, "matched_fragments": 173, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Janibacter anophelis", "strain": "strain=NBRC 107843", "accession": "GCA_001570945.1", "taxid": 319054, "species_taxid": 319054, "relation_to_type": "type", "validated": true, "ani": 75.3998, "matched_fragments": 95, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Georgenia muralis", "strain": "strain=DSM 14418", "accession": "GCA_003814705.1", "taxid": 154117, "species_taxid": 154117, "relation_to_type": "type", "validated": true, "ani": 75.3712, "matched_fragments": 108, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides eburneiflavus", "strain": "strain=MMS17-SY213", "accession": "GCA_004785795.1", "taxid": 2518372, "species_taxid": 2518372, "relation_to_type": "type", "validated": true, "ani": 75.324, "matched_fragments": 127, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomycetospora cinnamomea", "strain": "strain=DSM 45771", "accession": "GCA_003096675.1", "taxid": 663609, "species_taxid": 663609, "relation_to_type": "type", "validated": true, "ani": 75.3121, "matched_fragments": 171, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acrocarpospora corrugata", "strain": "strain=NBRC 13972", "accession": "GCA_009687845.1", "taxid": 35763, "species_taxid": 35763, "relation_to_type": "type", "validated": true, "ani": 75.214, "matched_fragments": 102, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kibdelosporangium banguiense", "strain": "strain=DSM 46670", "accession": "GCA_017876405.1", "taxid": 1365924, "species_taxid": 1365924, "relation_to_type": "type", "validated": true, "ani": 75.1607, "matched_fragments": 84, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas iranensis", "strain": "strain=NBRC 101100", "accession": "GCA_001552375.1", "taxid": 76862, "species_taxid": 76862, "relation_to_type": "type", "validated": true, "ani": 75.1573, "matched_fragments": 137, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Propioniciclava soli", "strain": "strain=YIM S02567", "accession": "GCA_014858005.1", "taxid": 2775081, "species_taxid": 2775081, "relation_to_type": "type", "validated": true, "ani": 75.0907, "matched_fragments": 74, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoclavibacter chungangensis", "strain": "strain=DSM 23821", "accession": "GCA_013410545.1", "taxid": 587635, "species_taxid": 587635, "relation_to_type": "type", "validated": true, "ani": 75.0337, "matched_fragments": 88, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces salentinus", "strain": "strain=JCM 14323", "accession": "GCA_009749395.1", "taxid": 269421, "species_taxid": 269421, "relation_to_type": "type", "validated": true, "ani": 75.0337, "matched_fragments": 94, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stackebrandtia nassauensis", "strain": "strain=DSM 44728", "accession": "GCA_000024545.1", "taxid": 283811, "species_taxid": 283811, "relation_to_type": "type", "validated": true, "ani": 74.9777, "matched_fragments": 91, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acrocarpospora macrocephala", "strain": "strain=NBRC 16266", "accession": "GCA_009687865.1", "taxid": 150177, "species_taxid": 150177, "relation_to_type": "type", "validated": true, "ani": 74.9742, "matched_fragments": 123, "total_fragments": 957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Conexibacter arvalis", "strain": "strain=DSM 23288", "accession": "GCA_014199525.1", "taxid": 912552, "species_taxid": 912552, 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