{
    "type": "genome",
    "identifier": "GCA_027404175.1",
    "organism": "Geobacteraceae bacterium",
    "title": "Geobacteraceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "an eLibrary of Microbial Systematics and Genomics",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_027404175.1",
        "bioproject": "PRJNA834572",
        "biosample": "SAMN28412122",
        "wgs_master": "DAHZCH000000000.1",
        "refseq_category": "na",
        "taxid": "2282154",
        "species_taxid": "2282154",
        "organism_name": "Geobacteraceae bacterium",
        "infraspecific_name": "",
        "isolate": "clean4728",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/27",
        "asm_name": "ASM2740417v1",
        "submitter": "an eLibrary of Microbial Systematics and Genomics",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/027/404/175/GCA_027404175.1_ASM2740417v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-27",
    "dateModified": "2022-12-27",
    "datePublished": "2022-12-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Geobacteraceae bacterium"
        ],
        "sample_taxid": [
            "2282154"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Guizhou, Banpo"
        ],
        "sample_host_location_id": [],
        "data_size": "0.858 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 79.17,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3000930",
        "Number of Sequences": "20",
        "Longest Sequences (bp)": "529645",
        "N50 (bp)": "344655",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "51.5",
        "Number of CDSs": "2733",
        "Average Protein Length": "327.3",
        "Coding Ratio (%)": "89.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Oryzomonas rubra",
                "strain": "strain=Red88",
                "accession": "GCA_008369015.1",
                "taxid": 2509454,
                "species_taxid": 2509454,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2109,
                "matched_fragments": 126,
                "total_fragments": 987,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oryzomonas japonica",
                "strain": "strain=Red96",
                "accession": "GCA_008802365.1",
                "taxid": 2603858,
                "species_taxid": 2603858,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.955,
                "matched_fragments": 154,
                "total_fragments": 987,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oryzomonas sagensis",
                "strain": "strain=Red100",
                "accession": "GCA_008802355.1",
                "taxid": 2603857,
                "species_taxid": 2603857,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8654,
                "matched_fragments": 134,
                "total_fragments": 987,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geobacter chapellei",
                "strain": "strain=DSM 13688",
                "accession": "GCA_018531195.1",
                "taxid": 44671,
                "species_taxid": 44671,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8484,
                "matched_fragments": 100,
                "total_fragments": 987,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pelobacter propionicus",
                "strain": "strain=DSM 2379",
                "accession": "GCA_000015045.1",
                "taxid": 29543,
                "species_taxid": 29543,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5854,
                "matched_fragments": 110,
                "total_fragments": 987,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 79.17,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_009886055.1",
                "gtdb_species": "s__JACRCG01 sp009886055",
                "ani": 80.5086,
                "matched_fragments": 363,
                "total_fragments": 987,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Pseudopelobacteraceae;g__JACRCG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019162745.1",
                "gtdb_species": "s__JACRCG01 sp019162745",
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                "matched_fragments": 403,
                "total_fragments": 987,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Pseudopelobacteraceae;g__JACRCG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903925005.1",
                "gtdb_species": "s__JACRCG01 sp903925005",
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                "matched_fragments": 361,
                "total_fragments": 987,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Pseudopelobacteraceae;g__JACRCG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.76",
                "min_intra_species_ani": "99.70",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_013336525.1",
                "gtdb_species": "s__JACRCG01 sp013336525",
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                "matched_fragments": 396,
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                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Pseudopelobacteraceae;g__JACRCG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.96",
                "min_intra_species_ani": "99.96",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903930585.1",
                "gtdb_species": "s__JACRCG01 sp903930585",
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                "matched_fragments": 320,
                "total_fragments": 987,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Pseudopelobacteraceae;g__JACRCG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009885845.1",
                "gtdb_species": "s__JACRCG01 sp009885845",
                "ani": 78.4283,
                "matched_fragments": 263,
                "total_fragments": 987,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Pseudopelobacteraceae;g__JACRCG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001802645.1",
                "gtdb_species": "s__JACRCG01 sp001802645",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903862245.1",
                "gtdb_species": "s__JACRCG01 sp903862245",
                "ani": 78.29,
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                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Pseudopelobacteraceae;g__JACRCG01",
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                "mean_intra_species_ani": "99.89",
                "min_intra_species_ani": "99.85",
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                "num_clustered_genomes": 4,
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            },
            {
                "accession": "GCA_903852495.1",
                "gtdb_species": "s__JACRCG01 sp903852495",
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                "matched_fragments": 264,
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                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Pseudopelobacteraceae;g__JACRCG01",
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                "mean_intra_species_ani": "99.47",
                "min_intra_species_ani": "98.75",
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            {
                "accession": "GCA_903879825.1",
                "gtdb_species": "s__JACRCG01 sp903879825",
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                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Pseudopelobacteraceae;g__JACRCG01",
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            },
            {
                "accession": "GCA_903939115.1",
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            {
                "accession": "GCA_903958085.1",
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                "mean_intra_species_ani": "99.67",
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                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 2,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.351,
        "cell_length": 0.204,
        "doubling_h": 0.943,
        "growth_tmp": 30.647,
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        "coding_genes": 3393.261,
        "rRNA16S_genes": 2.571,
        "tRNA_genes": 50.214,
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        "mesophilic_range_tmp": 1.0,
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        "bacillus_cell_shape": 0.923,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "o__Geobacterales",
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        "s__JACRCG01 sp021781535"
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    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Desulfobacterota",
        "c__Desulfuromonadia",
        "o__Geobacterales",
        "f__Pseudopelobacteraceae",
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        "Geobacterales",
        "Pseudopelobacteraceae",
        "JACRCG01",
        "JACRCG01",
        "sp021781535"
    ],
    "_meo": [
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}