{ "type": "genome", "identifier": "GCA_027404635.1", "organism": "Desulfatitalea sp.", "title": "Desulfatitalea sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "an eLibrary of Microbial Systematics and Genomics", "publication": [ {} ], "properties": { "assembly_accession": "GCA_027404635.1", "bioproject": "PRJNA834572", "biosample": "SAMN28412099", "wgs_master": "DAHZBK000000000.1", "refseq_category": "na", "taxid": "2724616", "species_taxid": "2724616", "organism_name": "Desulfatitalea sp.", "infraspecific_name": "", "isolate": "clean4704", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/27", "asm_name": "ASM2740463v1", "submitter": "an eLibrary of Microbial Systematics and Genomics", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/027/404/635/GCA_027404635.1_ASM2740463v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-27", "dateModified": "2022-12-27", "datePublished": "2022-12-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Desulfatitalea sp." ], "sample_taxid": [ "2724616" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Guangdong, Daobaoshan" ], "sample_host_location_id": [], "data_size": "1.660 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 58.33, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5836474", "Number of Sequences": "65", "Longest Sequences (bp)": "305530", "N50 (bp)": "148446", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "55.0", "Number of CDSs": "4919", "Average Protein Length": "338.1", "Coding Ratio (%)": "85.5", "Number of rRNAs": "1", "Number of tRNAs": "52", "Number of CRISPRs": "4" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Desulfatitalea tepidiphila", "strain": "strain=S28bF", "accession": "GCA_001293685.1", "taxid": 1185843, "species_taxid": 1185843, "relation_to_type": "type", "validated": true, "ani": 77.575, "matched_fragments": 291, "total_fragments": 1913, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfosarcina widdelii", "strain": "strain=PP31", "accession": "GCA_009688965.1", "taxid": 947919, "species_taxid": 947919, "relation_to_type": "type", "validated": true, "ani": 76.775, "matched_fragments": 147, "total_fragments": 1913, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfosarcina alkanivorans", "strain": "strain=PL12", "accession": "GCA_009688945.1", "taxid": 571177, "species_taxid": 571177, "relation_to_type": "type", "validated": true, "ani": 76.6276, "matched_fragments": 159, "total_fragments": 1913, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfosarcina ovata subsp. ovata", "strain": "strain=oXyS1", "accession": "GCA_009689005.1", "taxid": 2752305, "species_taxid": 83564, "relation_to_type": "type", "validated": true, "ani": 76.4651, "matched_fragments": 159, "total_fragments": 1913, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfonema ishimotonii", "strain": "strain=Tokyo 01", "accession": "GCA_003851005.1", "taxid": 45657, "species_taxid": 45657, "relation_to_type": "type", "validated": true, "ani": 76.3458, "matched_fragments": 81, "total_fragments": 1913, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfosudis oleivorans", "strain": "strain=Hxd3", "accession": "GCA_000018405.1", "taxid": 181663, "species_taxid": 181663, "relation_to_type": "type", "validated": true, "ani": 76.2639, "matched_fragments": 104, "total_fragments": 1913, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfosarcina ovata subsp. sediminis", "strain": "strain=28bB2T", "accession": "GCA_009688985.1", "taxid": 885957, "species_taxid": 83564, "relation_to_type": "type", "validated": true, "ani": 76.2326, "matched_fragments": 179, "total_fragments": 1913, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfatibacillum alkenivorans", "strain": "strain=DSM 16219", "accession": "GCA_900142135.1", "taxid": 259354, "species_taxid": 259354, "relation_to_type": "type", "validated": true, "ani": 76.0676, "matched_fragments": 83, "total_fragments": 1913, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfospira joergensenii", "strain": "strain=DSM 10085", "accession": "GCA_000420085.1", "taxid": 53329, "species_taxid": 53329, 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