{
    "type": "genome",
    "identifier": "GCA_027448845.1",
    "organism": "Sulfurimonas sp.",
    "title": "Sulfurimonas sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "an eLibrary of Microbial Systematics and Genomics",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_027448845.1",
        "bioproject": "PRJNA834572",
        "biosample": "SAMN28929121",
        "wgs_master": "DAIDMT000000000.1",
        "refseq_category": "na",
        "taxid": "2022749",
        "species_taxid": "2022749",
        "organism_name": "Sulfurimonas sp.",
        "infraspecific_name": "",
        "isolate": "clean458",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/27",
        "asm_name": "ASM2744884v1",
        "submitter": "an eLibrary of Microbial Systematics and Genomics",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/027/448/845/GCA_027448845.1_ASM2744884v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-27",
    "dateModified": "2022-12-27",
    "datePublished": "2022-12-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sulfurimonas sp."
        ],
        "sample_taxid": [
            "2022749"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Hunan"
        ],
        "sample_host_location_id": [],
        "data_size": "0.448 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 58.14,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1585822",
        "Number of Sequences": "136",
        "Longest Sequences (bp)": "78851",
        "N50 (bp)": "19431",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "40.3",
        "Number of CDSs": "1504",
        "Average Protein Length": "306.0",
        "Coding Ratio (%)": "87.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Sulfurimonas xiamenensis",
                "strain": "strain=1-1N",
                "accession": "GCA_009258045.1",
                "taxid": 2590021,
                "species_taxid": 2590021,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.7603,
                "matched_fragments": 150,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas denitrificans",
                "strain": "strain=DSM 1251",
                "accession": "GCA_000012965.1",
                "taxid": 39766,
                "species_taxid": 39766,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.7533,
                "matched_fragments": 204,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas crateris",
                "strain": "strain=SN118",
                "accession": "GCA_005217605.1",
                "taxid": 2574727,
                "species_taxid": 2574727,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.6151,
                "matched_fragments": 211,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Candidatus Sulfurimonas marisnigri",
                "strain": "strain=SoZ1",
                "accession": "GCA_015265475.1",
                "taxid": 2740405,
                "species_taxid": 2740405,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7813,
                "matched_fragments": 89,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas indica",
                "strain": "strain=NW8N",
                "accession": "GCA_009192995.1",
                "taxid": 2508707,
                "species_taxid": 2508707,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5316,
                "matched_fragments": 89,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas gotlandica",
                "strain": "strain=GD 1",
                "accession": "GCA_000156095.1",
                "taxid": 1176482,
                "species_taxid": 1176482,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5062,
                "matched_fragments": 93,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Candidatus Sulfurimonas baltica",
                "strain": "strain=GD2",
                "accession": "GCA_015265455.1",
                "taxid": 2740404,
                "species_taxid": 2740404,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4508,
                "matched_fragments": 105,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas hongkongensis",
                "strain": "strain=AST-10",
                "accession": "GCA_000445475.1",
                "taxid": 1172190,
                "species_taxid": 1172190,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.227,
                "matched_fragments": 86,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas lithotrophica",
                "strain": "strain=GYSZ_1",
                "accession": "GCA_009258225.1",
                "taxid": 2590022,
                "species_taxid": 2590022,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0682,
                "matched_fragments": 64,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas autotrophica",
                "strain": "strain=DSM 16294",
                "accession": "GCA_000147355.1",
                "taxid": 202747,
                "species_taxid": 202747,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9467,
                "matched_fragments": 74,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas paralvinellae",
                "strain": "strain=GO25",
                "accession": "GCA_014905135.1",
                "taxid": 317658,
                "species_taxid": 317658,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8014,
                "matched_fragments": 70,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 58.14,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002452425.1",
                "gtdb_species": "s__Sulfurimonas sp002452425",
                "ani": 95.943,
                "matched_fragments": 290,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.33",
                "min_intra_species_ani": "99.33",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_001829715.1",
                "gtdb_species": "s__Sulfurimonas sp001829715",
                "ani": 79.7305,
                "matched_fragments": 211,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.65",
                "min_intra_species_ani": "98.65",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903903705.1",
                "gtdb_species": "s__Sulfurimonas sp903903705",
                "ani": 79.6434,
                "matched_fragments": 128,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001829675.1",
                "gtdb_species": "s__Sulfurimonas sp001829675",
                "ani": 79.0295,
                "matched_fragments": 223,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.77",
                "min_intra_species_ani": "99.75",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_000012965.1",
                "gtdb_species": "s__Sulfurimonas denitrificans",
                "ani": 78.7434,
                "matched_fragments": 205,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_009883775.1",
                "gtdb_species": "s__Sulfurimonas sp002452895",
                "ani": 78.549,
                "matched_fragments": 154,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
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                "mean_intra_species_ani": "98.89",
                "min_intra_species_ani": "98.30",
                "mean_intra_species_af": "0.92",
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                "num_clustered_genomes": 4,
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            },
            {
                "accession": "GCA_014859695.1",
                "gtdb_species": "s__Sulfurimonas sp014859695",
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                "matched_fragments": 204,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_001829785.1",
                "gtdb_species": "s__Sulfurimonas sp001829785",
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                "matched_fragments": 180,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.93",
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                "mean_intra_species_af": "1.00",
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                "num_clustered_genomes": 4,
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            },
            {
                "accession": "GCA_002781365.1",
                "gtdb_species": "s__Sulfurimonas sp002781365",
                "ani": 77.1841,
                "matched_fragments": 104,
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                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
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                "mean_intra_species_ani": "99.99",
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                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 19,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.262,
        "cell_length": 0.176,
        "doubling_h": 1.211,
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        "optimum_ph": 6.425,
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        "gc_content": 34.843,
        "coding_genes": 2129.166,
        "rRNA16S_genes": 4.0,
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        "gram_stain": 0.0,
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        "range_salinity": null,
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        "mesophilic_range_tmp": 1.0,
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        "bacillus_cell_shape": 0.666,
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    "_gtdb_taxon": [
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        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
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    ],
    "_genome_taxon": [
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        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurimonadaceae",
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        "s__Sulfurimonas sp002452425",
        "Bacteria",
        "Campylobacterota",
        "Campylobacteria",
        "Campylobacterales",
        "Sulfurimonadaceae",
        "Sulfurimonas",
        "Sulfurimonas",
        "sp002452425"
    ],
    "_meo": [
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}