{ "tc_result": [ { "organism_name": "Phreatobacter oligotrophus", "strain": "strain=DSM 25521", "accession": "GCA_003046185.1", "taxid": 1122261, "species_taxid": 1122261, "relation_to_type": "type", "validated": true, "ani": 77.5867, "matched_fragments": 219, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga ossetica", "strain": "strain=V5/3M", "accession": "GCA_002741015.1", "taxid": 1882682, "species_taxid": 1882682, "relation_to_type": "type", "validated": true, "ani": 77.5422, "matched_fragments": 210, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium ajmalii", "strain": "strain=IF7SW-B2", "accession": "GCA_016613415.1", "taxid": 2738439, "species_taxid": 2738439, "relation_to_type": "type", "validated": true, "ani": 77.414, "matched_fragments": 234, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phreatobacter 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"GCA_003258765.1", "taxid": 1074, "species_taxid": 1074, "relation_to_type": "suspected-type", "validated": true, "ani": 77.3578, "matched_fragments": 219, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodoblastus acidophilus", "strain": "strain=DSM 137", "accession": "GCA_002937135.1", "taxid": 1074, "species_taxid": 1074, "relation_to_type": "suspected-type", "validated": true, "ani": 77.3274, "matched_fragments": 223, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylovirgula ligni", "strain": "strain=BW863", "accession": "GCA_003387225.1", "taxid": 569860, "species_taxid": 569860, "relation_to_type": "type", "validated": true, "ani": 77.3199, "matched_fragments": 129, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylocystis parvus", "strain": "strain=OBBP", "accession": "GCA_000283235.1", "taxid": 134, "species_taxid": 134, 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1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Candidatus Rhodoblastus alkanivorans", "strain": "", "accession": "GCA_022760755.1", "taxid": 2954117, "species_taxid": 2954117, "relation_to_type": "type", "validated": true, "ani": 77.1461, "matched_fragments": 183, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium currus", "strain": "strain=PR1016A", "accession": "GCA_003058325.1", "taxid": 2051553, "species_taxid": 2051553, "relation_to_type": "type", "validated": true, "ani": 77.1394, "matched_fragments": 252, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ancylobacter dichloromethanicus", "strain": "strain=VKM B-2484", "accession": "GCA_018390645.1", "taxid": 518825, "species_taxid": 518825, "relation_to_type": "type", "validated": true, "ani": 77.1364, "matched_fragments": 202, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium aeschynomenes", "strain": "strain=83002", "accession": "GCA_013178945.1", "taxid": 2734909, "species_taxid": 2734909, "relation_to_type": "type", "validated": true, "ani": 77.1303, "matched_fragments": 200, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinarimonas ramus", "strain": "strain=CGMCC 1.9161", "accession": "GCA_014645695.1", "taxid": 690164, "species_taxid": 690164, "relation_to_type": "type", "validated": true, "ani": 77.1247, "matched_fragments": 251, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lichenibacterium ramalinae", "strain": "strain=RmlP001", "accession": "GCA_004137085.1", "taxid": 2316527, "species_taxid": 2316527, "relation_to_type": "type", "validated": true, "ani": 77.1227, "matched_fragments": 227, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylosinus trichosporium", "strain": "strain=OB3b", "accession": "GCA_000178815.2", "taxid": 426, "species_taxid": 426, "relation_to_type": "type", "validated": true, "ani": 77.116, "matched_fragments": 213, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylosinus trichosporium", "strain": "strain=OB3b", "accession": "GCA_002752655.1", "taxid": 426, "species_taxid": 426, "relation_to_type": "type", "validated": true, "ani": 77.1108, "matched_fragments": 213, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium gregans", "strain": "strain=NBRC 103626", "accession": "GCA_022179245.1", "taxid": 374424, "species_taxid": 374424, "relation_to_type": "type", "validated": true, "ani": 77.0902, "matched_fragments": 217, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylosinus sporium", "strain": "strain=DSM 17706", "accession": 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1141884, "relation_to_type": "type", "validated": true, "ani": 76.9376, "matched_fragments": 255, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium anhuiense", "strain": "strain=CGMCC 1.12621", "accession": "GCA_014638185.1", "taxid": 1184720, "species_taxid": 1184720, "relation_to_type": "type", "validated": true, "ani": 76.5661, "matched_fragments": 121, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium anhuiense", "strain": "strain=CCBAU 23252", "accession": "GCA_003985145.1", "taxid": 1184720, "species_taxid": 1184720, "relation_to_type": "type", "validated": true, "ani": 76.5615, "matched_fragments": 119, "total_fragments": 1158, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_903918155.1", "gtdb_species": "s__28-YEA-48 sp903918155", 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylosinus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000427445.1", "gtdb_species": "s__Methylocella acidiphila", "ani": 76.6767, "matched_fragments": 116, "total_fragments": 1158, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylocella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }