{ "tc_result": [ { "organism_name": "Gemmatirosa kalamazoonensis", "strain": "strain=KBS708", "accession": "GCA_000522985.1", "taxid": 861299, "species_taxid": 861299, "relation_to_type": "type", "validated": true, "ani": 77.7515, "matched_fragments": 397, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmatimonas groenlandica", "strain": "strain=TET16", "accession": "GCA_013004105.1", "taxid": 2732249, "species_taxid": 2732249, "relation_to_type": "type", "validated": true, "ani": 76.387, "matched_fragments": 132, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmatimonas aurantiaca", "strain": "strain=T-27", "accession": "GCA_000010305.1", "taxid": 173480, "species_taxid": 173480, "relation_to_type": "type", "validated": true, "ani": 76.2567, "matched_fragments": 99, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmatimonas phototrophica", "strain": "strain=AP64", "accession": "GCA_000695095.2", "taxid": 1379270, "species_taxid": 1379270, "relation_to_type": "type", "validated": true, "ani": 76.0081, "matched_fragments": 93, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frateuria terrea", "strain": "strain=CGMCC 1.7053", "accession": "GCA_900115705.1", "taxid": 529704, "species_taxid": 529704, "relation_to_type": "type", "validated": true, "ani": 75.0922, "matched_fragments": 59, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum rugosum", "strain": "strain=IMMIB AFH-6", "accession": "GCA_017876155.1", "taxid": 416170, "species_taxid": 416170, "relation_to_type": "type", "validated": true, "ani": 74.8922, "matched_fragments": 117, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces kandeliae", "strain": "strain=Q22", "accession": "GCA_009674665.1", "taxid": 2666141, "species_taxid": 2666141, "relation_to_type": "type", "validated": true, "ani": 74.8882, "matched_fragments": 94, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kribbella sindirgiensis", "strain": "strain=DSM 27082", "accession": "GCA_004331435.1", "taxid": 1124744, "species_taxid": 1124744, "relation_to_type": "type", "validated": true, "ani": 74.8094, "matched_fragments": 87, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulosimicrobium funkei", "strain": "strain=NBRC 104118", "accession": "GCA_001570825.1", "taxid": 264251, "species_taxid": 264251, "relation_to_type": "suspected-type", "validated": true, "ani": 74.775, "matched_fragments": 135, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mangrovactinospora gilvigriseus", "strain": "strain=MUSC 26", "accession": "GCA_001879105.1", "taxid": 1428644, "species_taxid": 1428644, "relation_to_type": "type", "validated": true, "ani": 74.7647, "matched_fragments": 113, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalbus denitrificans", "strain": "strain=DSM 26407", "accession": "GCA_003337735.1", "taxid": 547122, "species_taxid": 547122, "relation_to_type": "type", "validated": true, "ani": 74.7644, "matched_fragments": 64, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 67.71, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_013361335.1", "gtdb_species": "s__AG11 sp013361335", "ani": 80.5533, "matched_fragments": 453, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__AG11", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.60", "min_intra_species_ani": "99.48", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.83", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCA_003223455.1", "gtdb_species": "s__AG11 sp003223455", "ani": 79.1401, "matched_fragments": 400, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__AG11", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_014378185.1", "gtdb_species": "s__AG11 sp014378185", "ani": 78.6024, "matched_fragments": 231, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__AG11", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002215645.1", "gtdb_species": "s__AG11 sp002215645", "ani": 78.4877, "matched_fragments": 270, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__AG11", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013361745.1", "gtdb_species": "s__JABFXC01 sp013361745", "ani": 78.2868, "matched_fragments": 185, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__JABFXC01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013361935.1", "gtdb_species": "s__JABFXC01 sp013361935", "ani": 78.2543, "matched_fragments": 299, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__JABFXC01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.88", "min_intra_species_ani": "99.88", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000522985.1", "gtdb_species": "s__Gemmatirosa kalamazoonesis", "ani": 77.7368, "matched_fragments": 398, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatirosa", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011390885.1", "gtdb_species": "s__JAABRT01 sp011390885", "ani": 77.4006, "matched_fragments": 237, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__JAABRT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001724275.1", "gtdb_species": "s__SCN-70-22 sp001724275", "ani": 77.2092, "matched_fragments": 231, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__SCN-70-22", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013360595.1", "gtdb_species": "s__JABWBJ01 sp013360595", "ani": 77.1446, "matched_fragments": 113, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__JABWBJ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016794735.1", "gtdb_species": "s__SCN-70-22 sp016794735", "ani": 76.865, "matched_fragments": 128, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__SCN-70-22", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002483225.1", "gtdb_species": "s__Gemmatimonas sp002483225", "ani": 76.789, "matched_fragments": 123, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.70", "min_intra_species_ani": "97.70", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_013697785.1", "gtdb_species": "s__FEN-1250 sp013697785", "ani": 76.684, "matched_fragments": 144, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__FEN-1250", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003222205.1", "gtdb_species": "s__40CM-2-70-7 sp003222205", "ani": 76.0935, "matched_fragments": 99, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__40CM-2-70-7", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.54", "min_intra_species_ani": "95.75", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.83", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCA_003221045.1", "gtdb_species": "s__AG41 sp003221045", "ani": 75.718, "matched_fragments": 67, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__AG41", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.20", "min_intra_species_ani": "98.20", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009674665.1", "gtdb_species": "s__Agromyces kandeliae", "ani": 74.8837, "matched_fragments": 95, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }