{
    "type": "genome",
    "identifier": "GCA_029050585.1",
    "organism": "Prevotella sp.",
    "title": "Prevotella sp.",
    "description": "derived from metagenome; fragmented assembly",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Queensland",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_029050585.1",
        "bioproject": "PRJNA725899",
        "biosample": "SAMN19956079",
        "wgs_master": "JAIDMJ000000000.1",
        "refseq_category": "na",
        "taxid": "59823",
        "species_taxid": "59823",
        "organism_name": "Prevotella sp.",
        "infraspecific_name": "",
        "isolate": "SC0340_S7_11",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/03/08",
        "asm_name": "ASM2905058v1",
        "submitter": "University of Queensland",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/029/050/585/GCA_029050585.1_ASM2905058v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-03-08",
    "dateModified": "2023-03-08",
    "datePublished": "2023-03-08",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Prevotella sp."
        ],
        "sample_taxid": [
            "59823"
        ],
        "sample_host_organism": [
            "Microtus arvalis"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Lithuania: Vilnius"
        ],
        "sample_host_location_id": [],
        "data_size": "0.458 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 41.76,
        "contamination": 4.17,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1572930",
        "Number of Sequences": "703",
        "Longest Sequences (bp)": "12882",
        "N50 (bp)": "2488",
        "Gap Ratio (%)": "0.002543",
        "GCcontent (%)": "51.3",
        "Number of CDSs": "813",
        "Average Protein Length": "281.4",
        "Coding Ratio (%)": "43.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "16",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 41.76,
            "contamination": 4.17,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_902782305.1",
                "gtdb_species": "s__Prevotella sp902782305",
                "ani": 78.8103,
                "matched_fragments": 57,
                "total_fragments": 166,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.21",
                "min_intra_species_ani": "96.08",
                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.67",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_017847725.1",
                "gtdb_species": "s__Prevotella sp017847725",
                "ani": 78.7638,
                "matched_fragments": 51,
                "total_fragments": 166,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900318795.1",
                "gtdb_species": "s__Prevotella sp900318795",
                "ani": 78.6007,
                "matched_fragments": 53,
                "total_fragments": 166,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.54",
                "min_intra_species_ani": "96.27",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 18,
                "status": "-"
            },
            {
                "accession": "GCA_015060535.1",
                "gtdb_species": "s__Prevotella sp015060535",
                "ani": 78.0327,
                "matched_fragments": 69,
                "total_fragments": 166,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.13",
                "min_intra_species_ani": "96.66",
                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.70",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_017389705.1",
                "gtdb_species": "s__Prevotella sp017389705",
                "ani": 77.9101,
                "matched_fragments": 54,
                "total_fragments": 166,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002342415.1",
                "gtdb_species": "s__Prevotella sp002342415",
                "ani": 77.8226,
                "matched_fragments": 59,
                "total_fragments": 166,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017458125.1",
                "gtdb_species": "s__Prevotella sp017458125",
                "ani": 77.7861,
                "matched_fragments": 59,
                "total_fragments": 166,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.42",
                "min_intra_species_ani": "97.42",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.226,
        "cell_length": 0.114,
        "doubling_h": null,
        "growth_tmp": 36.755,
        "optimum_tmp": 35.219,
        "optimum_ph": 7.109,
        "genome_size": 3037444.691,
        "gc_content": 45.137,
        "coding_genes": 2508.172,
        "rRNA16S_genes": 4.0,
        "tRNA_genes": 50.875,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.975,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.025,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Prevotella",
        "s__Prevotella sp947174945"
    ],
    "_genome_taxon": [
        "Prevotella",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Prevotella",
        "s__Prevotella sp947174945",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Bacteroidaceae",
        "Prevotella",
        "Prevotella",
        "sp947174945"
    ],
    "_meo": [
        {
            "id": "MEO_0000468",
            "label": "gut"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}