{
    "type": "genome",
    "identifier": "GCA_029623655.1",
    "organism": "Elizabethkingia anophelis",
    "title": "Elizabethkingia anophelis",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "QIMR Berghofer MRI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_029623655.1",
        "bioproject": "PRJNA930912",
        "biosample": "SAMN33037595",
        "wgs_master": "",
        "refseq_category": "na",
        "taxid": "1117645",
        "species_taxid": "1117645",
        "organism_name": "Elizabethkingia anophelis",
        "infraspecific_name": "",
        "isolate": "T02",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/04/08",
        "asm_name": "ASM2962365v1",
        "submitter": "QIMR Berghofer MRI",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/029/623/655/GCA_029623655.1_ASM2962365v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-04-08",
    "dateModified": "2023-04-08",
    "datePublished": "2023-04-08",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Elizabethkingia anophelis"
        ],
        "sample_taxid": [
            "1117645"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia:Queensland"
        ],
        "sample_host_location_id": [],
        "data_size": "1.169 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4182272",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "4182272",
        "N50 (bp)": "4182272",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "35.4",
        "Number of CDSs": "3789",
        "Average Protein Length": "323.7",
        "Coding Ratio (%)": "88.0",
        "Number of rRNAs": "15",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Elizabethkingia anophelis",
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                "accession": "GCA_002023665.2",
                "taxid": 1117645,
                "species_taxid": 1117645,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.2025,
                "matched_fragments": 1224,
                "total_fragments": 1394,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Elizabethkingia anophelis",
                "strain": "",
                "accession": "GCA_017124975.1",
                "taxid": 1117645,
                "species_taxid": 1117645,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.1874,
                "matched_fragments": 1205,
                "total_fragments": 1394,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Elizabethkingia anophelis",
                "strain": "strain=R26",
                "accession": "GCA_000331815.1",
                "taxid": 1117645,
                "species_taxid": 1117645,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.1499,
                "matched_fragments": 1200,
                "total_fragments": 1394,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Elizabethkingia miricola",
                "strain": "strain=DSM 14571",
                "accession": "GCA_008124555.1",
                "taxid": 172045,
                "species_taxid": 172045,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.2687,
                "matched_fragments": 1150,
                "total_fragments": 1394,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Elizabethkingia miricola",
                "strain": "strain=GTC_862",
                "accession": "GCA_001675285.1",
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                "species_taxid": 172045,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.2455,
                "matched_fragments": 1155,
                "total_fragments": 1394,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Elizabethkingia bruuniana",
                "strain": "strain=G0146",
                "accession": "GCA_002023205.1",
                "taxid": 1756149,
                "species_taxid": 1756149,
                "relation_to_type": "type",
                "validated": true,
                "ani": 91.7991,
                "matched_fragments": 1130,
                "total_fragments": 1394,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Elizabethkingia bruuniana",
                "strain": "strain=G0146",
                "accession": "GCA_002024805.1",
                "taxid": 1756149,
                "species_taxid": 1756149,
                "relation_to_type": "type",
                "validated": true,
                "ani": 91.7391,
                "matched_fragments": 1152,
                "total_fragments": 1394,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Elizabethkingia occulta",
                "strain": "strain=G4070",
                "accession": "GCA_002023715.1",
                "taxid": 1867263,
                "species_taxid": 1867263,
                "relation_to_type": "type",
                "validated": true,
                "ani": 90.5051,
                "matched_fragments": 1118,
                "total_fragments": 1394,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chryseobacterium ginsenosidimutans",
                "strain": "strain=THG 15",
                "accession": "GCA_024807225.1",
                "taxid": 687846,
                "species_taxid": 687846,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5573,
                "matched_fragments": 193,
                "total_fragments": 1394,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chryseobacterium schmidteae",
                "strain": "strain=Marseille-P9602",
                "accession": "GCA_903166575.1",
                "taxid": 2730404,
                "species_taxid": 2730404,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3066,
                "matched_fragments": 172,
                "total_fragments": 1394,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_002023665.2",
                "gtdb_species": "s__Elizabethkingia anophelis",
                "ani": 98.2025,
                "matched_fragments": 1224,
                "total_fragments": 1394,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Elizabethkingia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.27",
                "min_intra_species_ani": "97.37",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 104,
                "status": "conclusive"
            },
            {
                "accession": "GCF_001675285.1",
                "gtdb_species": "s__Elizabethkingia miricola",
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                "total_fragments": 1394,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Elizabethkingia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.66",
                "min_intra_species_ani": "96.19",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 23,
                "status": "-"
            },
            {
                "accession": "GCF_002024805.1",
                "gtdb_species": "s__Elizabethkingia bruuniana",
                "ani": 91.7535,
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                "total_fragments": 1394,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Elizabethkingia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.72",
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                "num_clustered_genomes": 13,
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            },
            {
                "accession": "GCF_002023715.1",
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                "total_fragments": 1394,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Elizabethkingia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.55",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_001521765.1",
                "gtdb_species": "s__Elizabethkingia ursingii",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Elizabethkingia",
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                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCF_003058195.1",
                "gtdb_species": "s__Elizabethkingia sp003058195",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Elizabethkingia",
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                "mean_intra_species_ani": "100.00",
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                "mean_intra_species_af": "1.00",
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            },
            {
                "accession": "GCF_900101995.1",
                "gtdb_species": "s__Riemerella columbipharyngis",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Riemerella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.302,
        "cell_length": null,
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        "mesophilic_range_tmp": 1.0,
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        "bacillus_cell_shape": 1.0,
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        "coccobacillus_cell_shape": 0.0,
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    },
    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
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        "f__Weeksellaceae",
        "g__Elizabethkingia",
        "s__Elizabethkingia anophelis"
    ],
    "_genome_taxon": [
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        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Weeksellaceae",
        "g__Elizabethkingia",
        "s__Elizabethkingia anophelis",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Weeksellaceae",
        "Elizabethkingia",
        "Elizabethkingia",
        "anophelis"
    ],
    "_meo": [
        {
            "id": "MEO_0000058",
            "label": "insecta associated"
        }
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}