{
    "type": "genome",
    "identifier": "GCA_900752175.1",
    "organism": "Bacteroidales bacterium",
    "title": "Bacteroidales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE JGI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_900752175.1",
        "bioproject": "PRJEB31003",
        "biosample": "SAMEA5279319",
        "wgs_master": "CAADUM000000000.1",
        "refseq_category": "na",
        "taxid": "2030927",
        "species_taxid": "2030927",
        "organism_name": "Bacteroidales bacterium",
        "infraspecific_name": "",
        "isolate": "HGM05238",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/06/26",
        "asm_name": "ERS235564_41",
        "submitter": "DOE JGI",
        "gbrs_paired_asm": "GCF_900752175.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/752/175/GCA_900752175.1_ERS235564_41",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-06-26",
    "dateModified": "2020-06-26",
    "datePublished": "2020-06-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidales bacterium"
        ],
        "sample_taxid": [
            "2030927"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Sweden"
        ],
        "sample_host_location_id": [],
        "data_size": "0.961 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3359263",
        "Number of Sequences": "37",
        "Longest Sequences (bp)": "527742",
        "N50 (bp)": "141636",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.2",
        "Number of CDSs": "2729",
        "Average Protein Length": "366.8",
        "Coding Ratio (%)": "89.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Paramuribaculum intestinale",
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                "accession": "GCA_003024925.1",
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                "species_taxid": 2094151,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 90,
                "total_fragments": 1100,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Muribaculum intestinale",
                "strain": "strain=YL27",
                "accession": "GCA_002201515.1",
                "taxid": 1796646,
                "species_taxid": 1796646,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7316,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Duncaniella muris",
                "strain": "strain=DSM 103720",
                "accession": "GCA_003024805.1",
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                "species_taxid": 2094150,
                "relation_to_type": "type",
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                "ani": 76.6558,
                "matched_fragments": 77,
                "total_fragments": 1100,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Muribaculum intestinale",
                "strain": "strain=YL27",
                "accession": "GCA_016696845.1",
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                "species_taxid": 1796646,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6522,
                "matched_fragments": 80,
                "total_fragments": 1100,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Muribaculum intestinale",
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                "accession": "GCA_001688845.2",
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                "species_taxid": 1796646,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6072,
                "matched_fragments": 81,
                "total_fragments": 1100,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sodaliphilus pleomorphus",
                "strain": "strain=Oil-RF-744-WCA-WT-10",
                "accession": "GCA_009696565.1",
                "taxid": 2606626,
                "species_taxid": 2606626,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4287,
                "matched_fragments": 67,
                "total_fragments": 1100,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sodaliphilus pleomorphus",
                "strain": "strain=Oil-RF-744-WCA-WT-10",
                "accession": "GCA_009676955.1",
                "taxid": 2606626,
                "species_taxid": 2606626,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3465,
                "matched_fragments": 69,
                "total_fragments": 1100,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Barnesiella viscericola",
                "strain": "strain=C46, DSM 18177",
                "accession": "GCA_000512915.1",
                "taxid": 397865,
                "species_taxid": 397865,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0881,
                "matched_fragments": 55,
                "total_fragments": 1100,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900760735.1",
                "gtdb_species": "s__CAG-485 sp900760735",
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                "total_fragments": 1100,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__CAG-485",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.21",
                "min_intra_species_ani": "95.16",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_905198125.1",
                "gtdb_species": "s__CAG-485 sp905198125",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__CAG-485",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900542185.1",
                "gtdb_species": "s__CAG-485 sp900542185",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__CAG-485",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002361235.1",
                "gtdb_species": "s__CAG-485 sp002361235",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__CAG-485",
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                "mean_intra_species_ani": "99.58",
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            },
            {
                "accession": "GCA_902796035.1",
                "gtdb_species": "s__CAG-485 sp900321585",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__CAG-485",
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                "mean_intra_species_ani": "98.23",
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                "min_intra_species_af": "0.76",
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            },
            {
                "accession": "GCA_900759795.1",
                "gtdb_species": "s__CAG-485 sp900759795",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__CAG-485",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.217,
        "cell_length": 0.157,
        "doubling_h": 0.206,
        "growth_tmp": 36.585,
        "optimum_tmp": 36.041,
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        "coding_genes": 3043.648,
        "rRNA16S_genes": 4.032,
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        "gram_stain": 0.014,
        "sporulation": 0.0,
        "motility": 0.04,
        "range_salinity": 0.0,
        "facultative_respiration": 0.006,
        "anaerobic_respiration": 0.958,
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        "mesophilic_range_tmp": 0.985,
        "thermophilic_range_tmp": 0.014,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.95,
        "coccus_cell_shape": 0.024,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.024,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Muribaculaceae",
        "g__Lepagella",
        "s__Lepagella sp902468245"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Muribaculaceae",
        "g__Lepagella",
        "s__Lepagella sp902468245",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Muribaculaceae",
        "Lepagella",
        "Lepagella",
        "sp902468245"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}