{
    "type": "genome",
    "identifier": "GCA_900752915.1",
    "organism": "uncultured Parasutterella sp.",
    "title": "uncultured Parasutterella sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE JGI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_900752915.1",
        "bioproject": "PRJEB31003",
        "biosample": "SAMEA5278647",
        "wgs_master": "CAADWY000000000.1",
        "refseq_category": "na",
        "taxid": "1263098",
        "species_taxid": "1263098",
        "organism_name": "uncultured Parasutterella sp.",
        "infraspecific_name": "",
        "isolate": "HGM19319",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/06/25",
        "asm_name": "ERS396310_57",
        "submitter": "DOE JGI",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/752/915/GCA_900752915.1_ERS396310_57",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-06-25",
    "dateModified": "2020-06-25",
    "datePublished": "2020-06-25",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Parasutterella sp."
        ],
        "sample_taxid": [
            "1263098"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark"
        ],
        "sample_host_location_id": [],
        "data_size": "0.460 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 51.04,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1592705",
        "Number of Sequences": "290",
        "Longest Sequences (bp)": "24760",
        "N50 (bp)": "6154",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "50.1",
        "Number of CDSs": "1239",
        "Average Protein Length": "293.6",
        "Coding Ratio (%)": "68.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "29",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Parasutterella excrementihominis",
                "strain": "strain=YIT 11859",
                "accession": "GCA_000205025.1",
                "taxid": 487175,
                "species_taxid": 487175,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.6969,
                "matched_fragments": 118,
                "total_fragments": 382,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 51.04,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_009767915.1",
                "gtdb_species": "s__Parasutterella sp009767915",
                "ani": 98.6928,
                "matched_fragments": 347,
                "total_fragments": 382,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Parasutterella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.92",
                "min_intra_species_ani": "98.38",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900552195.1",
                "gtdb_species": "s__Parasutterella sp900552195",
                "ani": 79.1322,
                "matched_fragments": 72,
                "total_fragments": 382,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Parasutterella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.66",
                "min_intra_species_ani": "98.32",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.67",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_000205025.1",
                "gtdb_species": "s__Parasutterella excrementihominis",
                "ani": 78.6969,
                "matched_fragments": 118,
                "total_fragments": 382,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Parasutterella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.19",
                "min_intra_species_ani": "97.92",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 25,
                "status": "-"
            },
            {
                "accession": "GCA_000980495.1",
                "gtdb_species": "s__Parasutterella gallistercoris",
                "ani": 78.5495,
                "matched_fragments": 111,
                "total_fragments": 382,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Parasutterella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.26",
                "min_intra_species_ani": "98.76",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCA_900766055.1",
                "gtdb_species": "s__Parasutterella sp900766055",
                "ani": 78.4371,
                "matched_fragments": 115,
                "total_fragments": 382,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Parasutterella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.97",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900554375.1",
                "gtdb_species": "s__Parasutterella sp900554375",
                "ani": 78.2153,
                "matched_fragments": 56,
                "total_fragments": 382,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Parasutterella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.098,
        "cell_length": 0.151,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 2831860.0,
        "gc_content": 48.14,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 0.5,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.5,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__Parasutterella",
        "s__Parasutterella muris"
    ],
    "_genome_taxon": [
        "uncultured",
        "Parasutterella",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__Parasutterella",
        "s__Parasutterella muris",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "Burkholderiaceae",
        "Parasutterella",
        "Parasutterella",
        "muris"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}