{
    "type": "genome",
    "identifier": "GCA_900753975.1",
    "organism": "Clostridia bacterium",
    "title": "Clostridia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE JGI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_900753975.1",
        "bioproject": "PRJEB31003",
        "biosample": "SAMEA5279864",
        "wgs_master": "CAAEBC000000000.1",
        "refseq_category": "na",
        "taxid": "2044939",
        "species_taxid": "2044939",
        "organism_name": "Clostridia bacterium",
        "infraspecific_name": "",
        "isolate": "HGM13618",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/06/26",
        "asm_name": "ERS396401_11",
        "submitter": "DOE JGI",
        "gbrs_paired_asm": "GCF_900753975.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/753/975/GCA_900753975.1_ERS396401_11",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-06-26",
    "dateModified": "2020-06-26",
    "datePublished": "2020-06-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Clostridia bacterium"
        ],
        "sample_taxid": [
            "2044939"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark"
        ],
        "sample_host_location_id": [],
        "data_size": "0.369 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 99.54,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1320494",
        "Number of Sequences": "79",
        "Longest Sequences (bp)": "80030",
        "N50 (bp)": "36297",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "31.2",
        "Number of CDSs": "1214",
        "Average Protein Length": "304.7",
        "Coding Ratio (%)": "84.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 99.54,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_900753975.1",
                "gtdb_species": "s__HGM13618 sp900753975",
                "ani": 100.0,
                "matched_fragments": 396,
                "total_fragments": 401,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__UBA1234;g__HGM13618",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.81",
                "min_intra_species_ani": "99.81",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900765095.1",
                "gtdb_species": "s__UBA1234 sp900765095",
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                "total_fragments": 401,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__UBA1234;g__UBA1234",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.96",
                "min_intra_species_ani": "99.96",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017469465.1",
                "gtdb_species": "s__HGM13618 sp017469465",
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                "matched_fragments": 130,
                "total_fragments": 401,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__UBA1234;g__HGM13618",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002404755.1",
                "gtdb_species": "s__UBA1234 sp002404755",
                "ani": 78.212,
                "matched_fragments": 75,
                "total_fragments": 401,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__UBA1234;g__UBA1234",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017462965.1",
                "gtdb_species": "s__UBA1234 sp017462965",
                "ani": 77.7112,
                "matched_fragments": 86,
                "total_fragments": 401,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__UBA1234;g__UBA1234",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017522765.1",
                "gtdb_species": "s__UBA1234 sp017522765",
                "ani": 77.6214,
                "matched_fragments": 90,
                "total_fragments": 401,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__UBA1234;g__UBA1234",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017521465.1",
                "gtdb_species": "s__RGIG6291 sp017521465",
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                "matched_fragments": 88,
                "total_fragments": 401,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__UBA1234;g__RGIG6291",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017539905.1",
                "gtdb_species": "s__RGIG6105 sp017539905",
                "ani": 77.1126,
                "matched_fragments": 50,
                "total_fragments": 401,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__UBA1234;g__RGIG6105",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015056545.1",
                "gtdb_species": "s__SIG350 sp015056545",
                "ani": 76.657,
                "matched_fragments": 51,
                "total_fragments": 401,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__SIG350;g__SIG350",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__TANB77",
        "f__UBA1234",
        "g__HGM13618",
        "s__HGM13618 sp900753975"
    ],
    "_genome_taxon": [
        "Clostridia",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__TANB77",
        "f__UBA1234",
        "g__HGM13618",
        "s__HGM13618 sp900753975",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "TANB77",
        "UBA1234",
        "HGM13618",
        "HGM13618",
        "sp900753975"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}