{
    "type": "genome",
    "identifier": "GCA_900758025.1",
    "organism": "uncultured Thomasclavelia sp.",
    "title": "uncultured Thomasclavelia sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE JGI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_900758025.1",
        "bioproject": "PRJEB31003",
        "biosample": "SAMEA5279230",
        "wgs_master": "CAAEQC000000000.1",
        "refseq_category": "na",
        "taxid": "3025759",
        "species_taxid": "3025759",
        "organism_name": "uncultured Thomasclavelia sp.",
        "infraspecific_name": "",
        "isolate": "HGM09805",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/06/26",
        "asm_name": "ERS608477_44",
        "submitter": "DOE JGI",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/758/025/GCA_900758025.1_ERS608477_44",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-06-26",
    "dateModified": "2020-06-26",
    "datePublished": "2020-06-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Thomasclavelia sp."
        ],
        "sample_taxid": [
            "3025759"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Austria"
        ],
        "sample_host_location_id": [],
        "data_size": "0.738 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 6.06,
        "strain_heterogeneity": 50.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2691744",
        "Number of Sequences": "235",
        "Longest Sequences (bp)": "68731",
        "N50 (bp)": "15645",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "28.9",
        "Number of CDSs": "2667",
        "Average Protein Length": "290.6",
        "Coding Ratio (%)": "86.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Faecalibacillus intestinalis",
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                "ani_threshold": 95,
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            },
            {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Erysipelatoclostridium ramosum",
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                "accession": "GCA_014131695.1",
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                "species_taxid": 1547,
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] cocleatum",
                "strain": "strain=I50",
                "accession": "GCA_010206155.1",
                "taxid": 69824,
                "species_taxid": 69824,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "[Clostridium] spiroforme",
                "strain": "strain=DSM 1552",
                "accession": "GCA_000154805.1",
                "taxid": 29348,
                "species_taxid": 29348,
                "relation_to_type": "type",
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                "ani": 78.323,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] spiroforme",
                "strain": "strain=DSM 1552",
                "accession": "GCA_025149465.1",
                "taxid": 29348,
                "species_taxid": 29348,
                "relation_to_type": "type",
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                "ani": 78.2866,
                "matched_fragments": 215,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Coprobacillus cateniformis",
                "strain": "strain=RCA1-24",
                "accession": "GCA_009767585.1",
                "taxid": 100884,
                "species_taxid": 100884,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4982,
                "matched_fragments": 187,
                "total_fragments": 785,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 6.06,
            "strain_heterogeneity": 50.0
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        "gtdb_result": [
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                "accession": "GCA_900544435.1",
                "gtdb_species": "s__Faecalibacillus sp900544435",
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                "matched_fragments": 487,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Faecalibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.05",
                "min_intra_species_ani": "98.83",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.74",
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            },
            {
                "accession": "GCF_003024685.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Faecalibacillus",
                "ani_circumscription_radius": 95.0,
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                "mean_intra_species_af": "0.85",
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                "status": "-"
            },
            {
                "accession": "GCF_003024675.1",
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                "matched_fragments": 533,
                "total_fragments": 785,
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                "mean_intra_species_ani": "97.99",
                "min_intra_species_ani": "96.95",
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                "num_clustered_genomes": 14,
                "status": "-"
            },
            {
                "accession": "GCF_003480255.1",
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                "matched_fragments": 332,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Faecalibacillus",
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                "mean_intra_species_ani": "99.06",
                "min_intra_species_ani": "98.20",
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                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCF_016901755.1",
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                "matched_fragments": 231,
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                "num_clustered_genomes": 3,
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            {
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Erysipelatoclostridium",
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                "num_clustered_genomes": 13,
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            },
            {
                "accession": "GCF_002160495.1",
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                "matched_fragments": 262,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Erysipelatoclostridium",
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                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_002359025.1",
                "gtdb_species": "s__UBA3379 sp002359025",
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                "matched_fragments": 132,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__UBA3379",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__Erysipelotrichales",
        "f__Coprobacillaceae",
        "g__Faecalibacillus",
        "s__Faecalibacillus sp900544435"
    ],
    "_genome_taxon": [
        "uncultured",
        "Thomasclavelia",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__Erysipelotrichales",
        "f__Coprobacillaceae",
        "g__Faecalibacillus",
        "s__Faecalibacillus sp900544435",
        "Bacteria",
        "Bacillota",
        "I",
        "Bacilli",
        "A",
        "Erysipelotrichales",
        "Coprobacillaceae",
        "Faecalibacillus",
        "Faecalibacillus",
        "sp900544435"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}