{ "type": "genome", "identifier": "GCA_900758225.1", "organism": "uncultured Slackia sp.", "title": "uncultured Slackia sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "DOE JGI", "publication": [ {} ], "properties": { "assembly_accession": "GCA_900758225.1", "bioproject": "PRJEB31003", "biosample": "SAMEA5279734", "wgs_master": "CAAEQV000000000.1", "refseq_category": "na", "taxid": "665903", "species_taxid": "665903", "organism_name": "uncultured Slackia sp.", "infraspecific_name": "", "isolate": "HGM04378", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/06/26", "asm_name": "ERS608495_107", "submitter": "DOE JGI", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/758/225/GCA_900758225.1_ERS608495_107", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-06-26", "dateModified": "2020-06-26", "datePublished": "2020-06-26", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Slackia sp." ], "sample_taxid": [ "665903" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Austria" ], "sample_host_location_id": [], "data_size": "0.516 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1819443", "Number of Sequences": "59", "Longest Sequences (bp)": "134512", "N50 (bp)": "39890", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "57.7", "Number of CDSs": "1524", "Average Protein Length": "335.0", "Coding Ratio (%)": "84.2", "Number of rRNAs": "0", "Number of tRNAs": "46", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Slackia isoflavoniconvertens", "strain": "strain=DSM 22006", "accession": "GCA_014192995.1", "taxid": 572010, "species_taxid": 572010, "relation_to_type": "type", "validated": true, "ani": 96.9973, "matched_fragments": 533, "total_fragments": 577, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Slackia isoflavoniconvertens", "strain": "strain=DSM 22006", "accession": "GCA_003725955.1", "taxid": 572010, "species_taxid": 572010, "relation_to_type": "type", "validated": true, "ani": 96.9536, "matched_fragments": 534, "total_fragments": 577, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Slackia equolifaciens", "strain": "strain=DSM 24851", "accession": "GCA_003725995.1", "taxid": 498718, "species_taxid": 498718, "relation_to_type": "type", "validated": true, "ani": 78.5502, "matched_fragments": 159, "total_fragments": 577, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Senegalimassilia anaerobia", "strain": "strain=type strain: JC110", "accession": "GCA_000236865.1", "taxid": 1473216, "species_taxid": 1473216, "relation_to_type": "type", "validated": true, "ani": 78.505, "matched_fragments": 139, "total_fragments": 577, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Slackia faecicanis", "strain": "strain=DSM 17537", "accession": "GCA_003725295.1", "taxid": 255723, "species_taxid": 255723, "relation_to_type": "type", "validated": true, "ani": 78.46, "matched_fragments": 180, "total_fragments": 577, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Slackia piriformis", "strain": "strain=YIT 12062", "accession": "GCA_000296445.1", "taxid": 626934, "species_taxid": 626934, "relation_to_type": "type", "validated": true, "ani": 78.3452, "matched_fragments": 135, "total_fragments": 577, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Slackia heliotrinireducens", "strain": "strain=DSM 20476", "accession": "GCA_000023885.1", "taxid": 84110, "species_taxid": 84110, "relation_to_type": "type", "validated": true, "ani": 77.7755, "matched_fragments": 108, "total_fragments": 577, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Slackia heliotrinireducens", "strain": "strain=NCTC11029", "accession": "GCA_900637575.1", "taxid": 84110, "species_taxid": 84110, "relation_to_type": "type", "validated": true, "ani": 77.7427, "matched_fragments": 108, "total_fragments": 577, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Adlercreutzia muris", "strain": "strain=DSM 29508", "accession": "GCA_008831045.1", "taxid": 1796610, "species_taxid": 1796610, "relation_to_type": "type", "validated": true, 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