{
    "type": "genome",
    "identifier": "GCA_900758945.1",
    "organism": "Lachnospiraceae bacterium",
    "title": "Lachnospiraceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE JGI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_900758945.1",
        "bioproject": "PRJEB31003",
        "biosample": "SAMEA5279833",
        "wgs_master": "CAAETI000000000.1",
        "refseq_category": "na",
        "taxid": "1898203",
        "species_taxid": "1898203",
        "organism_name": "Lachnospiraceae bacterium",
        "infraspecific_name": "",
        "isolate": "HGM12017",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/06/26",
        "asm_name": "ERS608570_26",
        "submitter": "DOE JGI",
        "gbrs_paired_asm": "GCF_900758945.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/758/945/GCA_900758945.1_ERS608570_26",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-06-26",
    "dateModified": "2020-06-26",
    "datePublished": "2020-06-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Lachnospiraceae bacterium"
        ],
        "sample_taxid": [
            "1898203"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Austria"
        ],
        "sample_host_location_id": [],
        "data_size": "0.545 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 25.38,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1925728",
        "Number of Sequences": "177",
        "Longest Sequences (bp)": "95998",
        "N50 (bp)": "27369",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "42.4",
        "Number of CDSs": "1560",
        "Average Protein Length": "343.5",
        "Coding Ratio (%)": "83.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "17",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Blautia obeum",
                "strain": "strain=ATCC 29174",
                "accession": "GCA_000153905.1",
                "taxid": 40520,
                "species_taxid": 40520,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.118,
                "matched_fragments": 270,
                "total_fragments": 553,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia obeum",
                "strain": "strain=ATCC 29174",
                "accession": "GCA_025147765.1",
                "taxid": 40520,
                "species_taxid": 40520,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.0171,
                "matched_fragments": 280,
                "total_fragments": 553,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia intestinalis",
                "strain": "strain=27-44",
                "accession": "GCA_014297355.1",
                "taxid": 2763028,
                "species_taxid": 2763028,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.5401,
                "matched_fragments": 257,
                "total_fragments": 553,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia wexlerae",
                "strain": "strain=DSM 19850",
                "accession": "GCA_000484655.1",
                "taxid": 418240,
                "species_taxid": 418240,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 79.6883,
                "matched_fragments": 188,
                "total_fragments": 553,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia luti",
                "strain": "strain=DSM 14534",
                "accession": "GCA_009707925.1",
                "taxid": 89014,
                "species_taxid": 89014,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 78.9818,
                "matched_fragments": 193,
                "total_fragments": 553,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia massiliensis",
                "strain": "strain=GD9",
                "accession": "GCA_001487165.1",
                "taxid": 1737424,
                "species_taxid": 1737424,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8231,
                "matched_fragments": 180,
                "total_fragments": 553,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia caecimuris",
                "strain": "strain=DSM 29492",
                "accession": "GCA_024622975.1",
                "taxid": 1796615,
                "species_taxid": 1796615,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2901,
                "matched_fragments": 166,
                "total_fragments": 553,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 25.38,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900551715.1",
                "gtdb_species": "s__Blautia_A sp900551715",
                "ani": 98.2248,
                "matched_fragments": 412,
                "total_fragments": 553,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000153905.1",
                "gtdb_species": "s__Blautia_A obeum",
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                "matched_fragments": 270,
                "total_fragments": 553,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.25",
                "min_intra_species_ani": "97.20",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.75",
                "num_clustered_genomes": 45,
                "status": "-"
            },
            {
                "accession": "GCF_000210015.1",
                "gtdb_species": "s__Blautia_A obeum_B",
                "ani": 80.5654,
                "matched_fragments": 267,
                "total_fragments": 553,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.64",
                "min_intra_species_ani": "98.44",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_900120195.1",
                "gtdb_species": "s__Blautia_A sp900120195",
                "ani": 80.5537,
                "matched_fragments": 260,
                "total_fragments": 553,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.52",
                "min_intra_species_ani": "98.42",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCF_003461245.1",
                "gtdb_species": "s__Blautia_A sp000436615",
                "ani": 80.4377,
                "matched_fragments": 278,
                "total_fragments": 553,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.75",
                "min_intra_species_ani": "98.36",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCA_900066355.1",
                "gtdb_species": "s__Blautia_A sp900066355",
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                "matched_fragments": 267,
                "total_fragments": 553,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.38",
                "min_intra_species_ani": "98.38",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_009883055.1",
                "gtdb_species": "s__Blautia_A sp900548245",
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                "matched_fragments": 265,
                "total_fragments": 553,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.63",
                "min_intra_species_ani": "98.37",
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                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 5,
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            },
            {
                "accession": "GCF_018918125.1",
                "gtdb_species": "s__Blautia_A sp018918125",
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                "matched_fragments": 277,
                "total_fragments": 553,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_900751995.1",
                "gtdb_species": "s__Blautia_A sp900751995",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A",
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                "mean_intra_species_ani": "95.05",
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                "min_intra_species_af": "0.55",
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            },
            {
                "accession": "GCF_003477525.1",
                "gtdb_species": "s__Blautia_A sp003477525",
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                "matched_fragments": 207,
                "total_fragments": 553,
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                "mean_intra_species_ani": "99.30",
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            },
            {
                "accession": "GCF_013302405.1",
                "gtdb_species": "s__Blautia_A caecimuris",
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                "matched_fragments": 165,
                "total_fragments": 553,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A",
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                "mean_intra_species_ani": "97.97",
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                "mean_intra_species_af": "0.87",
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                "num_clustered_genomes": 11,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.239,
        "cell_length": 0.277,
        "doubling_h": 0.394,
        "growth_tmp": 37.0,
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        "gc_content": 42.852,
        "coding_genes": 3283.347,
        "rRNA16S_genes": 6.0,
        "tRNA_genes": 63.727,
        "gram_stain": 0.885,
        "sporulation": 0.414,
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        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.988,
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        "mesophilic_range_tmp": 1.0,
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        "bacillus_cell_shape": 0.8,
        "coccus_cell_shape": 0.133,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.033,
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    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
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        "f__Lachnospiraceae",
        "g__Blautia_A",
        "s__Blautia_A sp900551715"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Blautia_A",
        "s__Blautia_A sp900551715",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Lachnospiraceae",
        "Blautia",
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        "Blautia",
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        "sp900551715"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}