{
    "type": "genome",
    "identifier": "GCA_900772145.1",
    "organism": "Clostridia bacterium",
    "title": "Clostridia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE JGI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_900772145.1",
        "bioproject": "PRJEB31003",
        "biosample": "SAMEA5279567",
        "wgs_master": "CAAGQO000000000.1",
        "refseq_category": "na",
        "taxid": "2044939",
        "species_taxid": "2044939",
        "organism_name": "Clostridia bacterium",
        "infraspecific_name": "",
        "isolate": "HGM13630",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/06/26",
        "asm_name": "SRS820617_51",
        "submitter": "DOE JGI",
        "gbrs_paired_asm": "GCF_900772145.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/772/145/GCA_900772145.1_SRS820617_51",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-06-26",
    "dateModified": "2020-06-26",
    "datePublished": "2020-06-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Clostridia bacterium"
        ],
        "sample_taxid": [
            "2044939"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Peru"
        ],
        "sample_host_location_id": [],
        "data_size": "0.358 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 14.25,
        "strain_heterogeneity": 6.25,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1304836",
        "Number of Sequences": "126",
        "Longest Sequences (bp)": "86291",
        "N50 (bp)": "20283",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "28.7",
        "Number of CDSs": "1257",
        "Average Protein Length": "275.4",
        "Coding Ratio (%)": "79.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "20",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 14.25,
            "strain_heterogeneity": 6.25
        },
        "gtdb_result": [
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                "total_fragments": 372,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__UMGS1781",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.58",
                "min_intra_species_ani": "99.24",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_004554705.1",
                "gtdb_species": "s__UMGS1781 sp004554705",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900553365.1",
                "gtdb_species": "s__UMGS1781 sp900553365",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__UMGS1781",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.19",
                "min_intra_species_ani": "99.04",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900553695.1",
                "gtdb_species": "s__UMGS1781 sp900553695",
                "ani": 81.6174,
                "matched_fragments": 209,
                "total_fragments": 372,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__UMGS1781",
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                "mean_intra_species_ani": "98.77",
                "min_intra_species_ani": "98.67",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900554635.1",
                "gtdb_species": "s__UMGS1781 sp900554635",
                "ani": 80.9347,
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                "total_fragments": 372,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__UMGS1781",
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                "mean_intra_species_ani": "99.19",
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                "mean_intra_species_af": "0.82",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCA_004553715.1",
                "gtdb_species": "s__SFKP01 sp004553715",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__SFKP01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "status": "-"
            },
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                "accession": "GCA_900556455.1",
                "gtdb_species": "s__UMGS1933 sp900556455",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__UMGS1933",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900754085.1",
                "gtdb_species": "s__Merdicola sp900754085",
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                "total_fragments": 372,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__Merdicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.92",
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                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_904420285.1",
                "gtdb_species": "s__CAG-273 sp904420285",
                "ani": 76.4475,
                "matched_fragments": 65,
                "total_fragments": 372,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__CAG-273",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__TANB77",
        "f__CAG-508",
        "g__UMGS1781",
        "s__UMGS1781 sp900555075"
    ],
    "_genome_taxon": [
        "Clostridia",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__TANB77",
        "f__CAG-508",
        "g__UMGS1781",
        "s__UMGS1781 sp900555075",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "TANB77",
        "CAG-508",
        "UMGS1781",
        "UMGS1781",
        "sp900555075"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}