{
    "type": "genome",
    "identifier": "GCA_902528015.1",
    "organism": "uncultured Prochlorococcus sp.",
    "title": "uncultured Prochlorococcus sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "WOODS HOLE OCEANOGRAPHIC INSTITUTION",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902528015.1",
        "bioproject": "PRJEB33281",
        "biosample": "SAMEA6070568",
        "wgs_master": "CABZRB000000000.1",
        "refseq_category": "na",
        "taxid": "159733",
        "species_taxid": "159733",
        "organism_name": "uncultured Prochlorococcus sp.",
        "infraspecific_name": "",
        "isolate": "AG-896-I10",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/10/28",
        "asm_name": "AG-896-I10",
        "submitter": "WOODS HOLE OCEANOGRAPHIC INSTITUTION",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/528/015/GCA_902528015.1_AG-896-I10",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-10-28",
    "dateModified": "2019-10-28",
    "datePublished": "2019-10-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Prochlorococcus sp."
        ],
        "sample_taxid": [
            "159733"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.167 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 29.17,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "594502",
        "Number of Sequences": "53",
        "Longest Sequences (bp)": "41814",
        "N50 (bp)": "19225",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "31.8",
        "Number of CDSs": "592",
        "Average Protein Length": "277.3",
        "Coding Ratio (%)": "82.8",
        "Number of rRNAs": "3",
        "Number of tRNAs": "19",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 29.17,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_000635495.1",
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                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.33",
                "min_intra_species_ani": "95.15",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 73,
                "status": "conclusive"
            },
            {
                "accession": "GCA_000634215.1",
                "gtdb_species": "s__Prochlorococcus_A sp000634215",
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                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.63",
                "min_intra_species_ani": "98.32",
                "mean_intra_species_af": "0.87",
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                "num_clustered_genomes": 20,
                "status": "-"
            },
            {
                "accession": "GCA_902622625.1",
                "gtdb_species": "s__Prochlorococcus_A sp902622625",
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                "matched_fragments": 131,
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                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003209675.1",
                "gtdb_species": "s__Prochlorococcus_A sp003209675",
                "ani": 94.4719,
                "matched_fragments": 137,
                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003213375.1",
                "gtdb_species": "s__Prochlorococcus_A sp003213375",
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                "matched_fragments": 105,
                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.27",
                "min_intra_species_ani": "96.27",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003278855.1",
                "gtdb_species": "s__Prochlorococcus_A sp003278855",
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                "matched_fragments": 144,
                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002026005.1",
                "gtdb_species": "s__Prochlorococcus_A sp002026005",
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                "matched_fragments": 132,
                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.72",
                "min_intra_species_ani": "95.72",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902572395.1",
                "gtdb_species": "s__Prochlorococcus_A sp902572395",
                "ani": 94.279,
                "matched_fragments": 111,
                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003278955.1",
                "gtdb_species": "s__Prochlorococcus_A sp003278955",
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                "matched_fragments": 131,
                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
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                "mean_intra_species_ani": "99.80",
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                "mean_intra_species_af": "0.80",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003216915.1",
                "gtdb_species": "s__Prochlorococcus_A sp003216915",
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                "matched_fragments": 138,
                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003278765.1",
                "gtdb_species": "s__Prochlorococcus_A sp003278765",
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                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003211415.1",
                "gtdb_species": "s__Prochlorococcus_A sp003211415",
                "ani": 93.0835,
                "matched_fragments": 105,
                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.46",
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                "mean_intra_species_af": "0.66",
                "min_intra_species_af": "0.66",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003281385.1",
                "gtdb_species": "s__Prochlorococcus_A sp003281385",
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                "matched_fragments": 135,
                "total_fragments": 170,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Prochlorococcus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Cyanobacteriia",
        "o__PCC-6307",
        "f__Cyanobiaceae",
        "g__Prochlorococcus_A",
        "s__Prochlorococcus_A sp000635495"
    ],
    "_genome_taxon": [
        "uncultured",
        "Prochlorococcus",
        "sp.",
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Cyanobacteriia",
        "o__PCC-6307",
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        "g__Prochlorococcus_A",
        "s__Prochlorococcus_A sp000635495",
        "Bacteria",
        "Cyanobacteriota",
        "Cyanobacteriia",
        "PCC-6307",
        "Cyanobiaceae",
        "Prochlorococcus",
        "A",
        "Prochlorococcus",
        "A",
        "sp000635495"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}