{
    "type": "genome",
    "identifier": "GCA_902593995.1",
    "organism": "uncultured SAR86 cluster bacterium",
    "title": "uncultured SAR86 cluster bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "WOODS HOLE OCEANOGRAPHIC INSTITUTION",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902593995.1",
        "bioproject": "PRJEB33281",
        "biosample": "SAMEA6076526",
        "wgs_master": "CACJKM000000000.1",
        "refseq_category": "na",
        "taxid": "648174",
        "species_taxid": "648174",
        "organism_name": "uncultured SAR86 cluster bacterium",
        "infraspecific_name": "",
        "isolate": "AG-447-G08",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/11/06",
        "asm_name": "AG-447-G08",
        "submitter": "WOODS HOLE OCEANOGRAPHIC INSTITUTION",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/593/995/GCA_902593995.1_AG-447-G08",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-11-06",
    "dateModified": "2019-11-06",
    "datePublished": "2019-11-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured SAR86 cluster bacterium"
        ],
        "sample_taxid": [
            "648174"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.354 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 54.17,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1243685",
        "Number of Sequences": "36",
        "Longest Sequences (bp)": "318674",
        "N50 (bp)": "52596",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "36.4",
        "Number of CDSs": "1195",
        "Average Protein Length": "319.1",
        "Coding Ratio (%)": "92.0",
        "Number of rRNAs": "3",
        "Number of tRNAs": "23",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 54.17,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_003212335.1",
                "gtdb_species": "s__GCA-2707915 sp003212335",
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                "matched_fragments": 327,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2707915",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.12",
                "min_intra_species_ani": "95.05",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 11,
                "status": "conclusive"
            },
            {
                "accession": "GCA_902630715.1",
                "gtdb_species": "s__GCA-2707915 sp902630715",
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                "matched_fragments": 106,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2707915",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902604855.1",
                "gtdb_species": "s__GCA-2707915 sp902604855",
                "ani": 78.9204,
                "matched_fragments": 153,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2707915",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902618945.1",
                "gtdb_species": "s__GCA-2707915 sp902618945",
                "ani": 78.7713,
                "matched_fragments": 130,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2707915",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.64",
                "min_intra_species_ani": "95.64",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902606175.1",
                "gtdb_species": "s__GCA-2707915 sp902606175",
                "ani": 78.7638,
                "matched_fragments": 123,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2707915",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.24",
                "min_intra_species_ani": "95.17",
                "mean_intra_species_af": "0.72",
                "min_intra_species_af": "0.71",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902574355.1",
                "gtdb_species": "s__GCA-2707915 sp902574355",
                "ani": 78.726,
                "matched_fragments": 129,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2707915",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902517565.1",
                "gtdb_species": "s__GCA-2707915 sp902517565",
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                "matched_fragments": 132,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2707915",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902542325.1",
                "gtdb_species": "s__GCA-2707915 sp902542325",
                "ani": 78.4373,
                "matched_fragments": 125,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2707915",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.62",
                "min_intra_species_ani": "99.62",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016777005.1",
                "gtdb_species": "s__GCA-2707915 sp016777005",
                "ani": 77.9774,
                "matched_fragments": 108,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2707915",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902532675.1",
                "gtdb_species": "s__GCA-2730855 sp902532675",
                "ani": 77.9548,
                "matched_fragments": 73,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2730855",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002707915.1",
                "gtdb_species": "s__GCA-2707915 sp002707915",
                "ani": 77.0495,
                "matched_fragments": 96,
                "total_fragments": 394,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__SAR86;g__GCA-2707915",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.24",
                "min_intra_species_ani": "96.30",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.75",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__SAR86",
        "f__SAR86",
        "g__GCA-2707915",
        "s__GCA-2707915 sp902559365"
    ],
    "_genome_taxon": [
        "uncultured",
        "SAR86",
        "cluster",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__SAR86",
        "f__SAR86",
        "g__GCA-2707915",
        "s__GCA-2707915 sp902559365",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "SAR86",
        "SAR86",
        "GCA-2707915",
        "GCA-2707915",
        "sp902559365"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}