{
    "type": "genome",
    "identifier": "GCA_902727895.1",
    "organism": "uncultured Sulfurovum sp.",
    "title": "uncultured Sulfurovum sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "MPIBREMEN",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902727895.1",
        "bioproject": "PRJEB36085",
        "biosample": "SAMEA6463004",
        "wgs_master": "CACVAP000000000.1",
        "refseq_category": "na",
        "taxid": "269237",
        "species_taxid": "269237",
        "organism_name": "uncultured Sulfurovum sp.",
        "infraspecific_name": "",
        "isolate": "HLG_WM_MAG_06",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/21",
        "asm_name": "HLG_WM_MAG_06",
        "submitter": "MPIBREMEN",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/727/895/GCA_902727895.1_HLG_WM_MAG_06",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-21",
    "dateModified": "2020-07-21",
    "datePublished": "2020-07-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Sulfurovum sp."
        ],
        "sample_taxid": [
            "269237"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany"
        ],
        "sample_host_location_id": [],
        "data_size": "0.829 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.88,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2963167",
        "Number of Sequences": "105",
        "Longest Sequences (bp)": "188807",
        "N50 (bp)": "59970",
        "Gap Ratio (%)": "0.013499",
        "GCcontent (%)": "33.0",
        "Number of CDSs": "2824",
        "Average Protein Length": "309.2",
        "Coding Ratio (%)": "88.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "30",
        "Number of CRISPRs": "4"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Malaciobacter mytili",
                "strain": "strain=LMG 24559",
                "accession": "GCA_003346775.1",
                "taxid": 603050,
                "species_taxid": 603050,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7648,
                "matched_fragments": 50,
                "total_fragments": 934,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Malaciobacter mytili",
                "strain": "strain=CECT 7386",
                "accession": "GCA_004116555.1",
                "taxid": 603050,
                "species_taxid": 603050,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7392,
                "matched_fragments": 51,
                "total_fragments": 934,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Malaciobacter pacificus",
                "strain": "strain=CGMCC 1.11011",
                "accession": "GCA_014636355.1",
                "taxid": 1080223,
                "species_taxid": 1080223,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7263,
                "matched_fragments": 64,
                "total_fragments": 934,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Malaciobacter pacificus",
                "strain": "strain=LMG 26638",
                "accession": "GCA_004214795.1",
                "taxid": 1080223,
                "species_taxid": 1080223,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7089,
                "matched_fragments": 67,
                "total_fragments": 934,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 87.88,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_902727895.1",
                "gtdb_species": "s__UBA1140 sp902727895",
                "ani": 100.0,
                "matched_fragments": 930,
                "total_fragments": 934,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_902727905.1",
                "gtdb_species": "s__UBA1140 sp902727905",
                "ani": 82.861,
                "matched_fragments": 399,
                "total_fragments": 934,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902727915.1",
                "gtdb_species": "s__UBA1140 sp902727915",
                "ani": 82.5853,
                "matched_fragments": 498,
                "total_fragments": 934,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902727935.1",
                "gtdb_species": "s__UBA1140 sp902727935",
                "ani": 81.9906,
                "matched_fragments": 447,
                "total_fragments": 934,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902727995.1",
                "gtdb_species": "s__UBA1140 sp902727995",
                "ani": 81.9014,
                "matched_fragments": 408,
                "total_fragments": 934,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902727855.1",
                "gtdb_species": "s__Sulfurovum sp902727855",
                "ani": 78.2919,
                "matched_fragments": 128,
                "total_fragments": 934,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003978395.1",
                "gtdb_species": "s__UBA1140 sp003978395",
                "ani": 77.7495,
                "matched_fragments": 177,
                "total_fragments": 934,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.398,
        "cell_length": -0.302,
        "doubling_h": null,
        "growth_tmp": 31.666,
        "optimum_tmp": 29.0,
        "optimum_ph": 6.75,
        "genome_size": 2296291.375,
        "gc_content": 44.3,
        "coding_genes": 2127.333,
        "rRNA16S_genes": 3.0,
        "tRNA_genes": 44.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.5,
        "aerobic_respiration": 0.5,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 1.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurovaceae",
        "g__UBA1140",
        "s__UBA1140 sp902727895"
    ],
    "_genome_taxon": [
        "uncultured",
        "Sulfurovum",
        "sp.",
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurovaceae",
        "g__UBA1140",
        "s__UBA1140 sp902727895",
        "Bacteria",
        "Campylobacterota",
        "Campylobacteria",
        "Campylobacterales",
        "Sulfurovaceae",
        "UBA1140",
        "UBA1140",
        "sp902727895"
    ],
    "_meo": [
        {
            "id": "MEO_0000116",
            "label": "biofilm"
        },
        {
            "id": "MEO_0000023",
            "label": "sea"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}