{
    "type": "genome",
    "identifier": "GCA_902752695.1",
    "organism": "uncultured prokaryote",
    "title": "uncultured prokaryote",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "KTH",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902752695.1",
        "bioproject": "PRJEB34883",
        "biosample": "SAMEA6513319",
        "wgs_master": "CADDOC000000000.1",
        "refseq_category": "na",
        "taxid": "198431",
        "species_taxid": "198431",
        "organism_name": "uncultured prokaryote",
        "infraspecific_name": "",
        "isolate": "",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/03/05",
        "asm_name": "P2236_112_bin33_mag_fasta",
        "submitter": "KTH",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/752/695/GCA_902752695.1_P2236_112_bin33_mag_fasta",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-03-05",
    "dateModified": "2020-03-05",
    "datePublished": "2020-03-05",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured prokaryote"
        ],
        "sample_taxid": [
            "198431"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Baltic Sea"
        ],
        "sample_host_location_id": [],
        "data_size": "0.648 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2274692",
        "Number of Sequences": "174",
        "Longest Sequences (bp)": "124310",
        "N50 (bp)": "22514",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "57.9",
        "Number of CDSs": "2122",
        "Average Protein Length": "305.3",
        "Coding Ratio (%)": "85.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Rhabdothermincola salaria",
                "strain": "strain=EGI L10124",
                "accession": "GCA_021246445.1",
                "taxid": 2903142,
                "species_taxid": 2903142,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.977,
                "matched_fragments": 96,
                "total_fragments": 670,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomarinicola tropica",
                "strain": "strain=SCSIO 58843",
                "accession": "GCA_009650215.1",
                "taxid": 2789776,
                "species_taxid": 2789776,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8382,
                "matched_fragments": 50,
                "total_fragments": 670,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_005787345.1",
                "gtdb_species": "s__F1-20-MAGs160 sp005787345",
                "ani": 91.5504,
                "matched_fragments": 529,
                "total_fragments": 670,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA8139;g__F1-20-MAGs160",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.08",
                "min_intra_species_ani": "96.08",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_009703275.1",
                "gtdb_species": "s__F1-20-MAGs160 sp009703275",
                "ani": 90.4994,
                "matched_fragments": 424,
                "total_fragments": 670,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA8139;g__F1-20-MAGs160",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.87",
                "min_intra_species_ani": "98.58",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_903827085.1",
                "gtdb_species": "s__F1-20-MAGs160 sp903827085",
                "ani": 89.9124,
                "matched_fragments": 387,
                "total_fragments": 670,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA8139;g__F1-20-MAGs160",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009699125.1",
                "gtdb_species": "s__F1-20-MAGs160 sp009699125",
                "ani": 84.698,
                "matched_fragments": 434,
                "total_fragments": 670,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA8139;g__F1-20-MAGs160",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.35",
                "min_intra_species_ani": "99.30",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_016462055.1",
                "gtdb_species": "s__F1-20-MAGs160 sp016462055",
                "ani": 81.1341,
                "matched_fragments": 312,
                "total_fragments": 670,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA8139;g__F1-20-MAGs160",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903867185.1",
                "gtdb_species": "s__F1-20-MAGs160 sp903867185",
                "ani": 80.9068,
                "matched_fragments": 354,
                "total_fragments": 670,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA8139;g__F1-20-MAGs160",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009700115.1",
                "gtdb_species": "s__F1-20-MAGs160 sp009700115",
                "ani": 80.6918,
                "matched_fragments": 326,
                "total_fragments": 670,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA8139;g__F1-20-MAGs160",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.37",
                "min_intra_species_ani": "98.87",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 10,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Acidimicrobiales",
        "f__UBA8139",
        "g__F1-20-MAGs160",
        "s__F1-20-MAGs160 sp937876315"
    ],
    "_genome_taxon": [
        "uncultured",
        "prokaryote",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Acidimicrobiales",
        "f__UBA8139",
        "g__F1-20-MAGs160",
        "s__F1-20-MAGs160 sp937876315",
        "Bacteria",
        "Actinomycetota",
        "Acidimicrobiia",
        "Acidimicrobiales",
        "UBA8139",
        "F1-20-MAGs160",
        "F1-20-MAGs160",
        "sp937876315"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}