{ "type": "genome", "identifier": "GCA_902755765.1", "organism": "uncultured Eubacteriales bacterium", "title": "uncultured Eubacteriales bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "THE ROSLIN INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCA_902755765.1", "bioproject": "PRJEB31266", "biosample": "SAMEA6148220", "wgs_master": "CACVOO000000000.1", "refseq_category": "na", "taxid": "172733", "species_taxid": "172733", "organism_name": "uncultured Eubacteriales bacterium", "infraspecific_name": "", "isolate": "RUG10087", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/02/17", "asm_name": "Rumen uncultured genome RUG10087", "submitter": "THE ROSLIN INSTITUTE", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/755/765/GCA_902755765.1_Rumen_uncultured_genome_RUG10087", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-02-17", "dateModified": "2020-02-17", "datePublished": "2020-02-17", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Eubacteriales bacterium" ], "sample_taxid": [ "172733" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "United Kingdom" ], "sample_host_location_id": [], "data_size": "0.766 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 87.5, "contamination": 7.2, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2757535", "Number of Sequences": "290", "Longest Sequences (bp)": "81780", "N50 (bp)": "14420", "Gap Ratio (%)": "0.012294", "GCcontent (%)": "63.3", "Number of CDSs": "2215", "Average Protein Length": "322.6", "Coding Ratio (%)": "77.7", "Number of rRNAs": "0", "Number of tRNAs": "39", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Dysosmobacter welbionis", "strain": "strain=J115", "accession": "GCA_005121165.3", "taxid": 2093857, "species_taxid": 2093857, "relation_to_type": "type", "validated": true, "ani": 76.9502, "matched_fragments": 78, "total_fragments": 774, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium phoceensis", "strain": "strain=GD3", "accession": "GCA_001244495.1", "taxid": 1650661, "species_taxid": 1650661, "relation_to_type": "type", "validated": true, "ani": 76.3783, "matched_fragments": 73, 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