{
    "type": "genome",
    "identifier": "GCA_902757145.1",
    "organism": "uncultured Prevotellaceae bacterium",
    "title": "uncultured Prevotellaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "THE ROSLIN INSTITUTE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902757145.1",
        "bioproject": "PRJEB31266",
        "biosample": "SAMEA6148370",
        "wgs_master": "CACVUA000000000.1",
        "refseq_category": "na",
        "taxid": "370804",
        "species_taxid": "370804",
        "organism_name": "uncultured Prevotellaceae bacterium",
        "infraspecific_name": "",
        "isolate": "RUG10237",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/02/15",
        "asm_name": "Rumen uncultured genome RUG10237",
        "submitter": "THE ROSLIN INSTITUTE",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/757/145/GCA_902757145.1_Rumen_uncultured_genome_RUG10237",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-02-15",
    "dateModified": "2020-02-15",
    "datePublished": "2020-02-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Prevotellaceae bacterium"
        ],
        "sample_taxid": [
            "370804"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "0.556 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1940277",
        "Number of Sequences": "244",
        "Longest Sequences (bp)": "37392",
        "N50 (bp)": "10308",
        "Gap Ratio (%)": "0.020358",
        "GCcontent (%)": "49.1",
        "Number of CDSs": "1509",
        "Average Protein Length": "329.4",
        "Coding Ratio (%)": "76.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Prevotella pectinovora",
                "strain": "strain=P4-76",
                "accession": "GCA_000834015.1",
                "taxid": 1602169,
                "species_taxid": 1602169,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9048,
                "matched_fragments": 65,
                "total_fragments": 519,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Xylanibacter rodentium",
                "strain": "strain=PROD",
                "accession": "GCA_013166575.1",
                "taxid": 2736289,
                "species_taxid": 2736289,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9046,
                "matched_fragments": 61,
                "total_fragments": 519,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella lascolaii",
                "strain": "strain=khD1",
                "accession": "GCA_900079775.1",
                "taxid": 1776379,
                "species_taxid": 1776379,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6015,
                "matched_fragments": 66,
                "total_fragments": 519,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella baroniae",
                "strain": "strain=DSM 16972",
                "accession": "GCA_000426585.1",
                "taxid": 305719,
                "species_taxid": 305719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3769,
                "matched_fragments": 64,
                "total_fragments": 519,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella baroniae",
                "strain": "strain=JCM 13447",
                "accession": "GCA_000613565.1",
                "taxid": 305719,
                "species_taxid": 305719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3356,
                "matched_fragments": 63,
                "total_fragments": 519,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hallella faecis",
                "strain": "strain=CLA-AA-H145",
                "accession": "GCA_018789675.1",
                "taxid": 2841596,
                "species_taxid": 2841596,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1803,
                "matched_fragments": 62,
                "total_fragments": 519,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
            {
                "accession": "GCA_900314915.1",
                "gtdb_species": "s__Prevotella sp900314915",
                "ani": 98.8252,
                "matched_fragments": 486,
                "total_fragments": 519,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.86",
                "min_intra_species_ani": "97.07",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 19,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017471245.1",
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                "matched_fragments": 73,
                "total_fragments": 519,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.04",
                "min_intra_species_ani": "98.04",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902776685.1",
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                "matched_fragments": 90,
                "total_fragments": 519,
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002353555.1",
                "gtdb_species": "s__Prevotella sp002353555",
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                "matched_fragments": 70,
                "total_fragments": 519,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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                "mean_intra_species_ani": "97.61",
                "min_intra_species_ani": "97.57",
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                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017635615.1",
                "gtdb_species": "s__Prevotella sp017635615",
                "ani": 76.8313,
                "matched_fragments": 61,
                "total_fragments": 519,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902792685.1",
                "gtdb_species": "s__Prevotella sp902792685",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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                "mean_intra_species_ani": "96.79",
                "min_intra_species_ani": "96.68",
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                "min_intra_species_af": "0.71",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_902801375.1",
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                "mean_intra_species_ani": "97.75",
                "min_intra_species_ani": "97.75",
                "mean_intra_species_af": "0.82",
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                "status": "-"
            },
            {
                "accession": "GCA_902762325.1",
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                "mean_intra_species_ani": "98.14",
                "min_intra_species_ani": "98.03",
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            },
            {
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                "matched_fragments": 79,
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                "mean_intra_species_ani": "98.50",
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            {
                "accession": "GCA_902783625.1",
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            {
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                "num_clustered_genomes": 6,
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            {
                "accession": "GCA_905198745.1",
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                "matched_fragments": 50,
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.225,
        "cell_length": 0.118,
        "doubling_h": null,
        "growth_tmp": 36.775,
        "optimum_tmp": 35.358,
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        "gc_content": 45.298,
        "coding_genes": 2508.172,
        "rRNA16S_genes": 4.0,
        "tRNA_genes": 50.875,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
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        "mesophilic_range_tmp": 1.0,
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        "bacillus_cell_shape": 0.976,
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        "coccobacillus_cell_shape": 0.023,
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    "_gtdb_taxon": [
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        "c__Bacteroidia",
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        "g__Prevotella",
        "s__Prevotella sp900314915"
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    "_genome_taxon": [
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        "Prevotellaceae",
        "bacterium",
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        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
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        "Bacteroidales",
        "Bacteroidaceae",
        "Prevotella",
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    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}