{
    "type": "genome",
    "identifier": "GCA_902758085.1",
    "organism": "uncultured Coriobacteriaceae bacterium",
    "title": "uncultured Coriobacteriaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "THE ROSLIN INSTITUTE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902758085.1",
        "bioproject": "PRJEB31266",
        "biosample": "SAMEA6148466",
        "wgs_master": "CACVXO000000000.1",
        "refseq_category": "na",
        "taxid": "331632",
        "species_taxid": "331632",
        "organism_name": "uncultured Coriobacteriaceae bacterium",
        "infraspecific_name": "",
        "isolate": "RUG10333",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/02/17",
        "asm_name": "Rumen uncultured genome RUG10333",
        "submitter": "THE ROSLIN INSTITUTE",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/758/085/GCA_902758085.1_Rumen_uncultured_genome_RUG10333",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-02-17",
    "dateModified": "2020-02-17",
    "datePublished": "2020-02-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Coriobacteriaceae bacterium"
        ],
        "sample_taxid": [
            "331632"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "0.857 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3036666",
        "Number of Sequences": "52",
        "Longest Sequences (bp)": "236999",
        "N50 (bp)": "101148",
        "Gap Ratio (%)": "0.001844",
        "GCcontent (%)": "61.3",
        "Number of CDSs": "2676",
        "Average Protein Length": "335.0",
        "Coding Ratio (%)": "88.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Thermophilibacter provencensis",
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                "accession": "GCA_900128445.1",
                "taxid": 1852386,
                "species_taxid": 1852386,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.12,
                "matched_fragments": 208,
                "total_fragments": 986,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Olsenella intestinalis",
                "strain": "strain=KCTC 25379",
                "accession": "GCA_023276655.1",
                "taxid": 2930083,
                "species_taxid": 2930083,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.0433,
                "matched_fragments": 231,
                "total_fragments": 986,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thermophilibacter mediterraneus",
                "strain": "strain=Marseille-P3256",
                "accession": "GCA_900119385.1",
                "taxid": 1871031,
                "species_taxid": 1871031,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.7677,
                "matched_fragments": 212,
                "total_fragments": 986,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Olsenella urininfantis",
                "strain": "strain=Marseille-P3197",
                "accession": "GCA_900155635.1",
                "taxid": 1871033,
                "species_taxid": 1871033,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.7533,
                "matched_fragments": 158,
                "total_fragments": 986,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Olsenella phocaeensis",
                "strain": "strain=Marseille-P2936",
                "accession": "GCA_900120385.1",
                "taxid": 1852385,
                "species_taxid": 1852385,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.4929,
                "matched_fragments": 206,
                "total_fragments": 986,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Olsenella uli",
                "strain": "strain=DSM 7084",
                "accession": "GCA_000143845.1",
                "taxid": 133926,
                "species_taxid": 133926,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 78.294,
                "matched_fragments": 185,
                "total_fragments": 986,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Olsenella uli",
                "strain": "strain=DSM 7084",
                "accession": "GCA_001437585.1",
                "taxid": 133926,
                "species_taxid": 133926,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 78.2289,
                "matched_fragments": 188,
                "total_fragments": 986,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Olsenella massiliensis",
                "strain": "strain=SIT9",
                "accession": "GCA_001457795.1",
                "taxid": 1622075,
                "species_taxid": 1622075,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2205,
                "matched_fragments": 176,
                "total_fragments": 986,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_900314645.1",
                "gtdb_species": "s__UBA1367 sp900314645",
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                "matched_fragments": 984,
                "total_fragments": 986,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__UBA1367",
                "ani_circumscription_radius": 95.0,
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                "min_intra_species_ani": "97.54",
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                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__UBA1367",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902788705.1",
                "gtdb_species": "s__UBA1367 sp902788705",
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                "matched_fragments": 477,
                "total_fragments": 986,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__UBA1367",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.66",
                "min_intra_species_ani": "97.66",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017460265.1",
                "gtdb_species": "s__UBA1367 sp017460265",
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                "matched_fragments": 363,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__UBA1367",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
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                "gtdb_species": "s__UBA1367 sp902772435",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__UBA1367",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
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                "gtdb_species": "s__UBA1367 sp902779675",
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                "matched_fragments": 409,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__UBA1367",
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                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_902778135.1",
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            },
            {
                "accession": "GCA_902797175.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__UBA1367",
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCA_905235165.1",
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            {
                "accession": "GCF_001457795.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella_F",
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            {
                "accession": "GCA_902803315.1",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.435,
        "cell_length": 0.089,
        "doubling_h": null,
        "growth_tmp": 36.125,
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        "coding_genes": 1736.778,
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        "gram_stain": 1.0,
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        "bacillus_cell_shape": 1.0,
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    "_gtdb_taxon": [
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        "p__Actinomycetota",
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        "f__Atopobiaceae",
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        "s__UBA1367 sp900314645"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Coriobacteriia",
        "o__Coriobacteriales",
        "f__Atopobiaceae",
        "g__UBA1367",
        "s__UBA1367 sp900314645",
        "Bacteria",
        "Actinomycetota",
        "Coriobacteriia",
        "Coriobacteriales",
        "Atopobiaceae",
        "UBA1367",
        "UBA1367",
        "sp900314645"
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}